Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RQ3	19431	2024-11-16	2024-01-17	3.21	3.47	3.25	3.5	0.009	0.81	0.0	0.05	14.58	0.00	2.149	9.58	0.00	6.2	93.8	0.0	-0.39	0.61	0.85	2.21	3.5	0.003	0.58	0.0	0.04	16.43	0.00	2.521	5.42	1.81	4.2	95.8	0.0	1.69	0.73	0.54	0.82	1.16	11375	1432	1	0	0	0	0	logfile
✔	8RQ3	19431	2024-10-12	2024-01-17	3.21	3.47	3.25	3.5	0.009	0.81	0.0	0.05	14.58	0.00	2.149	9.58	0.00	6.2	93.8	0.0	-0.39	0.61	0.85	2.21	3.5	0.003	0.58	0.0	0.04	16.43	0.00	2.521	5.42	1.81	4.2	95.8	0.0	1.69	0.73	0.54	0.82	1.16	11375	1432	1	0	0	0	0	logfile
✔	8RQ3	19431	2024-09-25	2024-01-17	3.21	3.47	3.25	3.5	0.009	0.81	0.0	0.05	14.58	0.00	2.149	9.58	0.00	6.2	93.8	0.0	-0.39	0.61	0.85	2.21	3.5	0.003	0.58	0.0	0.04	16.43	0.00	2.521	5.42	1.81	4.2	95.8	0.0	1.69	0.73	0.54	0.82	1.16	11375	1432	1	0	0	0	0	logfile
✔	8RQ3	19431	2024-08-04	2024-01-17	3.21	3.47	3.25	3.5	0.009	0.81	0.0	0.05	14.58	0.00	2.149	9.58	0.00	6.2	93.8	0.0	-0.39	0.61	0.85	2.21	3.5	0.003	0.58	0.0	0.04	16.43	0.00	2.521	5.42	1.81	4.2	95.8	0.0	1.69	0.73	0.54	0.82	1.16	11375	1432	1	0	0	0	0	logfile
✔	8RQ3	19431	2024-07-20	2024-01-17	3.21	3.47	3.25	3.5	0.009	0.81	0.0	0.05	14.58	0.00	2.149	9.58	0.00	6.2	93.8	0.0	-0.39	0.61	0.85	2.21	3.5	0.003	0.55	0.0	0.04	16.39	0.00	2.225	6.42	1.58	4.2	95.8	0.0	1.78	0.73	0.53	0.80	0.98	11375	1432	1	0	0	0	0	logfile
✘	8XX3	38744	2025-03-14	2024-01-17	3.38	3.59	3.46	3.5	0.003	0.53	0.0	0.04	12.56	0.00	2.230	5.62	0.10	3.5	96.5	0.0	0.68	0.74	0.79	2.11	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9488	1255	7	0	0	0	0	logfile
✔	8XX3	38744	2025-02-13	2024-01-17	3.38	3.59	3.45	3.5	0.003	0.53	0.0	0.04	12.56	0.00	2.230	5.62	0.10	3.5	96.5	0.0	0.68	0.74	0.79	2.11	3.5	0.003	0.74	0.0	0.04	15.73	0.00	2.395	7.65	2.81	3.6	96.4	0.0	0.65	2.47	0.76	0.85	2.37	9488	1255	7	0	0	0	0	logfile
✔	8XX6	38747	2025-02-14	2024-01-17	2.99	3.23	3.12	3.2	0.002	0.47	0.0	0.04	12.90	0.00	2.229	4.30	0.00	3.3	96.7	0.0	0.68	0.73	0.82	2.56	3.2	0.003	0.78	0.0	0.04	15.87	0.00	2.312	8.50	1.98	4.0	96.0	0.0	0.61	1.69	0.74	0.85	2.81	9854	1278	7	0	0	0	0	logfile
✔	8RQ4	19433	2024-06-26	2024-01-17	3.45	3.84	3.57	3.8	0.007	0.72	0.0	0.05	18.58	0.00	2.209	11.02	0.64	4.5	95.5	0.0	1.28	0.61	0.78	1.01	3.8	0.003	0.58	0.0	0.04	18.57	0.00	2.198	10.00	4.43	3.9	96.1	0.0	1.96	0.75	0.65	0.84	1.17	11210	1402	2	0	3	0	0	logfile
✔	8RQ4	19433	2025-01-17	2024-01-17	3.45	3.84	3.57	3.8	0.007	0.72	0.0	0.05	18.58	0.00	2.209	11.02	0.64	4.5	95.5	0.0	1.28	0.61	0.78	1.01	3.8	0.004	0.62	0.0	0.04	18.46	0.00	2.514	8.15	3.79	4.0	96.0	0.0	1.77	0.51	0.66	0.85	1.01	11210	1402	2	0	3	0	0	logfile
✔	8XWP	38740	2025-02-13	2024-01-16	3.21	3.22	3.19	3.4	0.002	0.47	0.0	0.04	12.28	0.00	2.144	8.97	5.56	3.9	96.1	0.0	-0.38	0.67	0.77	1.87	3.4	0.004	0.98	1.0	0.04	15.14	0.00	1.999	12.41	4.95	4.5	95.5	0.0	-0.30	1.29	0.66	0.76	1.38	9076	1163	6	0	0	0	0	logfile
✔	8XWP	38740	2025-01-16	2024-01-16	3.21	3.22	3.19	3.4	0.002	0.47	0.0	0.04	12.28	0.00	2.144	8.97	5.56	3.9	96.1	0.0	-0.38	0.67	0.77	1.87	3.4	0.004	0.98	1.0	0.04	15.14	0.00	1.999	12.41	4.95	4.5	95.5	0.0	-0.30	1.29	0.66	0.76	1.38	9076	1163	6	0	0	0	0	logfile
✔	8VPP	43412	2024-10-11	2024-01-16	2.9	3.20	2.97	3.2	0.004	0.65	0.0	0.14	19.24	0.01	1.832	47.41	4.30	4.9	94.8	0.3	0.42	0.54	0.81	2.12	3.2	0.004	1.03	1.0	0.07	18.96	0.00	2.166	9.66	3.06	3.8	96.0	0.2	0.97	1.36	0.59	0.84	2.50	9930	1264	3	0	1	2	0	logfile
✔	8XWD	38733	2025-03-05	2024-01-16	3.1	2.81	2.32	3.3	0.010	1.02	0.0	0.07	17.29	0.00	2.222	13.21	0.00	22.4	77.6	0.0	-4.55	0.38	0.85	5.83	3.3	0.004	0.59	0.0	0.05	15.99	0.00	2.582	4.31	5.95	14.7	85.3	0.0	-1.87	1.72	0.36	0.86	5.81	2670	360	12	0	6	0	0	logfile
✔	8VPQ	43413	2025-01-18	2024-01-16	3.3	3.57	3.33	3.6	0.004	0.79	0.0	0.04	9.42	0.00	2.036	10.44	0.00	13.8	83.2	3.0	-4.85	0.65	0.77	3.77	3.6	0.006	0.75	0.0	0.05	14.03	0.00	1.984	6.75	2.05	8.2	91.4	0.4	-1.55	0.54	0.74	0.86	3.13	12090	1509	6	0	2	0	0	logfile
✔	8VPQ	43413	2024-12-30	2024-01-16	3.3	3.57	3.33	3.6	0.004	0.79	0.0	0.04	9.42	0.00	2.036	10.44	0.00	13.8	83.2	3.0	-4.85	0.65	0.77	3.77	3.6	0.004	0.68	0.0	0.04	14.01	0.00	2.039	5.95	2.05	6.9	92.7	0.4	-1.36	0.55	0.75	0.85	3.08	12090	1509	6	0	2	0	0	logfile
✔	8VPP	43412	2025-01-16	2024-01-16	2.9	3.20	2.97	3.2	0.004	0.65	0.0	0.14	19.24	0.01	1.832	47.41	4.30	4.9	94.8	0.3	0.42	0.54	0.81	2.12	3.2	0.003	0.78	0.0	0.07	18.94	0.00	2.166	8.66	3.35	3.9	95.8	0.2	0.80	1.36	0.57	0.84	2.38	9930	1264	3	0	1	2	0	logfile
✔	8VPP	43412	2024-09-25	2024-01-16	2.9	3.20	2.97	3.2	0.004	0.65	0.0	0.14	19.24	0.01	1.832	47.41	4.30	4.9	94.8	0.3	0.42	0.54	0.81	2.12	3.2	0.004	1.03	1.0	0.07	18.96	0.00	2.166	9.66	3.06	3.8	96.0	0.2	0.97	1.36	0.59	0.84	2.50	9930	1264	3	0	1	2	0	logfile
✔	8XWF	38734	2025-03-05	2024-01-16	3.65	3.87	3.66	3.8	0.004	0.58	0.0	0.04	13.12	0.00	2.340	2.09	0.00	1.2	98.8	0.0	2.95	0.53	0.75	1.98	3.8	0.003	0.66	0.0	0.04	15.67	0.00	2.532	5.47	1.88	1.9	98.1	0.0	2.40	1.28	0.60	0.82	1.73	3090	418	3	0	0	0	0	logfile
✔	8XWF	38734	2025-02-10	2024-01-16	3.65	3.87	3.68	3.8	0.004	0.58	0.0	0.04	13.12	0.00	2.340	2.09	0.00	1.2	98.8	0.0	2.95	0.53	0.75	1.98	3.8	0.003	0.67	0.0	0.04	15.87	0.00	2.531	5.15	2.51	1.5	98.5	0.0	2.57	1.28	0.59	0.81	1.41	3090	418	3	0	0	0	0	logfile

• ← previous
• Page 247 of 5115
• next →