Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XVU	38719	2025-03-05	2024-01-15	3.09	3.24	3.09	3.2	0.004	0.51	0.0	0.04	13.71	0.00	2.377	2.98	0.00	1.0	99.0	0.0	2.06	0.61	0.79	2.08	3.2	0.003	0.65	0.0	0.04	15.70	0.00	2.627	5.66	1.39	1.9	98.1	0.0	2.02	0.77	0.67	0.86	2.13	3288	427	3	0	0	0	0	logfile
✔	8XVi	38705	2025-01-15	2024-01-15	3.32	2.33	3.41	2.2	0.004	0.62	0.0	0.04	16.87	0.00	2.200	9.83	0.43	5.0	95.0	0.0	-0.52	0.73	0.72	0.95	2.2	0.005	0.70	0.0	0.05	17.24	0.00	2.523	8.48	4.26	6.6	93.4	0.0	-0.17	0.25	0.73	0.72	0.97	8587	1084	6	0	0	0	0	logfile
✔	8XVi	38705	2024-12-28	2024-01-15	3.32	2.33	3.41	2.2	0.004	0.62	0.0	0.04	16.87	0.00	2.200	9.83	0.43	5.0	95.0	0.0	-0.52	0.73	0.72	0.95	2.2	0.004	0.63	0.0	0.04	17.20	0.00	2.527	7.78	4.05	5.4	94.6	0.0	0.09	0.26	0.72	0.71	0.63	8587	1084	6	0	0	0	0	logfile
✔	8XVi	38705	2024-11-15	2024-01-15	3.32	2.33	3.41	2.2	0.004	0.62	0.0	0.04	16.87	0.00	2.200	9.83	0.43	5.0	95.0	0.0	-0.52	0.73	0.72	0.95	2.2	0.004	0.63	0.0	0.04	17.20	0.00	2.527	7.78	4.05	5.4	94.6	0.0	0.09	0.26	0.72	0.71	0.63	8587	1084	6	0	0	0	0	logfile
✔	8XVi	38705	2025-03-13	2024-01-15	3.32	2.33	3.41	2.2	0.004	0.62	0.0	0.04	16.87	0.00	2.200	9.83	0.43	5.0	95.0	0.0	-0.52	0.73	0.72	0.95	2.2	0.006	0.73	0.0	0.05	17.33	0.00	2.489	9.01	4.15	6.6	93.4	0.0	-0.27	0.26	0.73	0.72	0.92	8587	1084	6	0	0	0	0	logfile
✔	8XVU	38719	2025-02-10	2024-01-15	3.09	3.24	3.09	3.2	0.004	0.51	0.0	0.04	13.71	0.00	2.377	2.98	0.00	1.0	99.0	0.0	2.06	0.61	0.79	2.08	3.2	0.003	0.71	0.0	0.04	15.88	0.00	2.549	5.95	1.39	1.7	98.3	0.0	2.37	1.31	0.67	0.86	2.13	3288	427	3	0	0	0	0	logfile
✔	8XVi	38705	2024-10-10	2024-01-15	3.32	2.33	3.41	2.2	0.004	0.62	0.0	0.04	16.87	0.00	2.200	9.83	0.43	5.0	95.0	0.0	-0.52	0.73	0.72	0.95	2.2	0.004	0.63	0.0	0.04	17.20	0.00	2.527	7.78	4.05	5.4	94.6	0.0	0.09	0.26	0.72	0.71	0.63	8587	1084	6	0	0	0	0	logfile
✔	8XVi	38705	2024-09-24	2024-01-15	3.32	2.33	3.41	2.2	0.004	0.62	0.0	0.04	16.87	0.00	2.200	9.83	0.43	5.0	95.0	0.0	-0.52	0.73	0.72	0.95	2.2	0.004	0.63	0.0	0.04	17.20	0.00	2.527	7.78	4.05	5.4	94.6	0.0	0.09	0.26	0.72	0.71	0.63	8587	1084	6	0	0	0	0	logfile
✔	8XVE	38702	2024-12-28	2024-01-15	3.0	2.32	3.07	2.1	0.004	0.63	0.0	0.04	16.63	0.01	2.050	7.99	0.65	2.0	98.0	0.0	0.79	0.77	0.78	2.64	2.1	0.004	0.66	0.0	0.04	17.68	0.00	2.446	6.40	4.73	2.6	97.4	0.0	1.06	0.43	0.77	0.79	2.17	8524	1078	6	0	0	0	0	logfile
✔	8XVV	38720	2024-12-30	2024-01-15	3.2	3.11	3.21	3.2	0.002	0.52	0.0	0.14	13.99	0.00	2.084	5.54	0.25	3.7	96.3	0.0	-1.78	0.55	0.54	0.83	3.2	0.003	0.59	0.0	0.04	15.69	0.00	2.319	6.46	1.32	5.2	94.8	0.0	0.61	1.67	0.70	0.81	1.50	59257	3651	3	0	1	0	29886	logfile
✔	8XVZ	38724	2025-02-13	2024-01-15	3.78	3.95	3.77	3.8	0.011	1.05	0.0	0.05	13.53	0.01	1.969	17.84	0.00	16.2	83.5	0.3	-2.09	0.67	0.81	2.88	3.8	0.003	0.82	0.0	0.04	15.82	0.01	2.455	10.53	2.80	12.1	87.6	0.2	-0.46	1.16	0.64	0.78	1.62	8690	1223	2	0	0	0	0	logfile
✔	8XVZ	38724	2025-03-13	2024-01-15	3.78	3.95	3.76	3.8	0.011	1.05	0.0	0.05	13.53	0.01	1.969	17.84	0.00	16.2	83.5	0.3	-2.09	0.67	0.81	2.88	3.8	0.004	1.09	0.0	0.05	15.85	0.01	2.210	11.79	3.06	12.3	87.3	0.4	-0.61	1.16	0.64	0.78	1.54	8690	1223	2	0	0	0	0	logfile
✔	8XW1	38727	2024-06-24	2024-01-15	4.49	4.73	4.24	4.6	0.005	0.82	0.0	0.05	14.01	0.01	2.139	20.22	0.19	7.2	92.8	0.0	-0.07	0.59	0.82	—	4.6	0.003	0.66	0.0	0.04	13.95	0.00	2.153	13.05	0.00	5.9	94.1	0.0	1.16	1.07	0.58	0.82	—	5082	634	1	0	0	0	0	logfile
✔	8XVV	38720	2024-10-12	2024-01-15	3.2	3.11	3.21	3.2	0.002	0.52	0.0	0.14	13.99	0.00	2.084	5.54	0.25	3.7	96.3	0.0	-1.78	0.55	0.54	0.83	3.2	0.003	0.59	0.0	0.04	15.69	0.00	2.319	6.46	1.32	5.2	94.8	0.0	0.61	1.67	0.70	0.81	1.50	59257	3651	3	0	1	0	29886	logfile
✔	8XVZ	38724	2024-06-25	2024-01-15	3.78	3.95	3.77	3.8	0.011	1.05	0.0	0.05	13.53	0.01	1.969	17.84	0.00	16.2	83.5	0.3	-2.09	0.67	0.81	2.88	3.8	0.003	0.80	0.0	0.04	15.63	0.01	2.150	12.57	2.93	12.4	87.3	0.2	-0.41	1.17	0.63	0.77	1.75	8690	1223	2	0	0	0	0	logfile
✔	8XW0	38725	2024-12-29	2024-01-15	3.11	3.37	2.97	3.4	0.005	0.91	0.0	0.05	19.55	0.01	2.126	10.61	0.83	9.7	90.3	0.0	-0.53	0.60	0.81	2.07	3.4	0.003	0.62	0.0	0.04	17.70	0.00	2.398	7.39	1.41	7.8	92.2	0.0	0.43	1.55	0.65	0.84	1.50	11320	1392	4	0	4	0	0	logfile
✔	8XW0	38725	2024-11-16	2024-01-15	3.11	3.37	2.97	3.4	0.005	0.91	0.0	0.05	19.55	0.01	2.126	10.61	0.83	9.7	90.3	0.0	-0.53	0.60	0.81	2.07	3.4	0.003	0.62	0.0	0.04	17.70	0.00	2.398	7.39	1.41	7.8	92.2	0.0	0.43	1.55	0.65	0.84	1.50	11320	1392	4	0	4	0	0	logfile
✔	8XVZ	38724	2024-07-19	2024-01-15	3.78	3.95	3.77	3.8	0.011	1.05	0.0	0.05	13.53	0.01	1.969	17.84	0.00	16.2	83.5	0.3	-2.09	0.67	0.81	2.88	3.8	0.003	0.80	0.0	0.04	15.63	0.01	2.150	12.57	2.93	12.4	87.3	0.2	-0.41	1.17	0.63	0.77	1.75	8690	1223	2	0	0	0	0	logfile
✔	8XVZ	38724	2024-08-03	2024-01-15	3.78	3.95	3.77	3.8	0.011	1.05	0.0	0.05	13.53	0.01	1.969	17.84	0.00	16.2	83.5	0.3	-2.09	0.67	0.81	2.88	3.8	0.003	0.82	0.0	0.04	15.94	0.01	2.449	10.95	2.55	12.0	87.6	0.3	-0.55	1.16	0.64	0.78	1.67	8690	1223	2	0	0	0	0	logfile
✔	8XVZ	38724	2024-09-24	2024-01-15	3.78	3.95	3.77	3.8	0.011	1.05	0.0	0.05	13.53	0.01	1.969	17.84	0.00	16.2	83.5	0.3	-2.09	0.67	0.81	2.88	3.8	0.003	0.82	0.0	0.04	15.94	0.01	2.449	10.95	2.55	12.0	87.6	0.3	-0.55	1.16	0.64	0.78	1.67	8690	1223	2	0	0	0	0	logfile

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