Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y6A	38983	2025-01-16	2024-02-02	2.72	3.72	2.80	3.2	0.004	0.73	0.0	0.06	15.69	0.01	2.212	14.67	0.48	6.5	93.0	0.5	-1.89	0.79	0.64	1.10	3.3	0.004	0.92	0.0	0.05	16.08	0.00	2.126	15.35	1.90	7.4	92.5	0.2	-1.52	0.94	0.80	0.66	1.28	9786	1206	10	0	16	0	0	logfile
✔	8Y6A	38983	2024-10-11	2024-02-02	2.72	3.72	2.80	3.2	0.004	0.73	0.0	0.06	15.69	0.01	2.212	14.67	0.48	6.5	93.0	0.5	-1.89	0.79	0.64	1.10	3.3	0.004	0.92	0.0	0.05	15.93	0.01	2.082	15.77	1.81	7.3	92.6	0.1	-1.51	0.96	0.80	0.66	1.33	9786	1206	10	0	16	0	0	logfile
✔	8Y6A	38983	2024-12-29	2024-02-02	2.72	3.72	2.80	3.2	0.004	0.73	0.0	0.06	15.69	0.01	2.212	14.67	0.48	6.5	93.0	0.5	-1.89	0.79	0.64	1.10	3.3	0.004	0.92	0.0	0.05	15.93	0.01	2.082	15.77	1.81	7.3	92.6	0.1	-1.51	0.96	0.80	0.66	1.33	9786	1206	10	0	16	0	0	logfile
✔	8Y6N	38992	2025-01-14	2024-02-02	3.4	3.60	3.34	3.6	0.009	1.52	14.0	0.10	18.06	0.01	2.030	20.21	9.97	14.4	81.6	4.0	-3.25	0.60	0.74	2.52	3.6	0.003	0.76	0.0	0.04	16.79	0.00	2.608	11.49	4.36	7.2	92.8	0.0	-1.58	0.53	0.59	0.73	2.37	5858	768	2	0	0	0	0	logfile
✔	8Y6M	38991	2024-12-27	2024-02-02	2.91	3.15	2.93	3.2	0.006	0.70	0.0	0.05	18.43	0.01	2.065	13.26	7.32	3.3	96.7	0.0	0.60	0.50	0.70	2.60	3.2	0.003	0.63	0.0	0.04	18.07	0.00	2.598	12.81	4.14	3.0	97.0	0.0	1.22	1.06	0.50	0.70	2.05	6502	826	2	0	0	0	0	logfile
✔	8Y6M	38991	2025-04-27	2024-02-02	2.91	3.15	2.94	3.2	0.006	0.70	0.0	0.05	18.43	0.01	2.065	13.26	7.32	3.3	96.7	0.0	0.60	0.50	0.70	2.60	3.2	0.003	0.62	0.0	0.04	18.17	0.00	2.593	12.29	3.45	3.1	96.9	0.0	1.45	1.07	0.51	0.70	1.93	6502	826	2	0	0	0	0	logfile
✔	8Y6M	38991	2025-03-11	2024-02-02	2.91	3.15	2.94	3.2	0.006	0.70	0.0	0.05	18.43	0.01	2.065	13.26	7.32	3.3	96.7	0.0	0.60	0.50	0.70	2.60	3.2	0.004	0.64	0.0	0.04	18.18	0.00	2.592	12.89	3.45	3.0	97.0	0.0	1.18	1.06	0.51	0.70	2.03	6502	826	2	0	0	0	0	logfile
✔	8Y6M	38991	2025-02-11	2024-02-02	2.91	3.15	2.93	3.2	0.006	0.70	0.0	0.05	18.43	0.01	2.065	13.26	7.32	3.3	96.7	0.0	0.60	0.50	0.70	2.60	3.2	0.003	0.59	0.0	0.04	18.23	0.00	2.579	12.51	4.42	2.2	97.8	0.0	1.44	1.07	0.50	0.69	1.85	6502	826	2	0	0	0	0	logfile
✔	8Y6M	38991	2025-01-14	2024-02-02	2.91	3.15	2.93	3.2	0.006	0.70	0.0	0.05	18.43	0.01	2.065	13.26	7.32	3.3	96.7	0.0	0.60	0.50	0.70	2.60	3.2	0.003	0.59	0.0	0.04	18.23	0.00	2.579	12.51	4.42	2.2	97.8	0.0	1.44	1.07	0.50	0.69	1.85	6502	826	2	0	0	0	0	logfile
✔	8Y6L	38990	2024-12-27	2024-02-02	3.4	3.59	3.35	3.6	0.006	1.02	8.0	0.06	17.31	0.01	1.397	18.84	3.53	10.0	88.5	1.5	-1.61	0.58	0.74	2.10	3.6	0.004	0.84	0.0	0.04	17.74	0.00	2.398	13.58	5.74	7.9	91.9	0.2	-0.33	1.17	0.56	0.74	1.31	6256	818	2	0	0	0	0	logfile
✔	8Y6L	38990	2025-04-27	2024-02-02	3.4	3.59	3.33	3.6	0.006	1.02	8.0	0.06	17.31	0.01	1.397	18.84	3.53	10.0	88.5	1.5	-1.61	0.58	0.74	2.10	3.6	0.003	0.80	0.0	0.04	17.94	0.00	2.397	13.03	5.15	8.1	91.6	0.2	-0.19	1.17	0.56	0.73	1.39	6256	818	2	0	0	0	0	logfile
✔	8Y6L	38990	2025-03-11	2024-02-02	3.4	3.59	3.33	3.6	0.006	1.02	8.0	0.06	17.31	0.01	1.397	18.84	3.53	10.0	88.5	1.5	-1.61	0.58	0.74	2.10	3.6	0.003	0.81	0.0	0.04	17.94	0.00	2.397	13.03	5.15	8.1	91.6	0.2	-0.19	1.17	0.56	0.73	1.39	6256	818	2	0	0	0	0	logfile
✔	8Y6L	38990	2025-02-11	2024-02-02	3.4	3.59	3.35	3.6	0.006	1.02	8.0	0.06	17.31	0.01	1.397	18.84	3.53	10.0	88.5	1.5	-1.61	0.58	0.74	2.10	3.6	0.003	0.82	0.0	0.04	17.83	0.00	2.394	13.50	6.62	8.4	91.4	0.2	-0.26	0.54	0.57	0.74	1.25	6256	818	2	0	0	0	0	logfile
✔	8Y6L	38990	2025-01-14	2024-02-02	3.4	3.59	3.35	3.6	0.006	1.02	8.0	0.06	17.31	0.01	1.397	18.84	3.53	10.0	88.5	1.5	-1.61	0.58	0.74	2.10	3.6	0.003	0.82	0.0	0.04	17.83	0.00	2.394	13.50	6.62	8.4	91.4	0.2	-0.26	0.54	0.57	0.74	1.25	6256	818	2	0	0	0	0	logfile
✘	8RW5	19543	2024-12-27	2024-02-02	2.94	3.11	2.94	3.1	0.003	0.54	0.0	0.04	15.69	0.00	2.179	5.79	0.29	2.5	97.5	0.0	0.66	0.67	0.85	3.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6753	872	1	0	0	0	0	logfile
✘	8RW5	19543	2024-11-14	2024-02-02	2.94	3.11	2.94	3.1	0.003	0.54	0.0	0.04	15.69	0.00	2.179	5.79	0.29	2.5	97.5	0.0	0.66	0.67	0.85	3.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6753	872	1	0	0	0	0	logfile
✔	8RW5	19543	2025-04-28	2024-02-02	2.94	3.11	2.94	3.1	0.003	0.54	0.0	0.04	15.69	0.00	2.179	5.79	0.29	2.5	97.5	0.0	0.66	0.67	0.85	3.33	3.1	0.005	0.62	0.0	0.04	16.52	0.01	2.544	5.79	2.05	2.9	97.1	0.0	0.71	0.68	0.68	0.86	3.14	6753	872	1	0	0	0	0	logfile
✔	8RW5	19543	2025-02-11	2024-02-02	2.94	3.11	2.94	3.1	0.003	0.54	0.0	0.04	15.69	0.00	2.179	5.79	0.29	2.5	97.5	0.0	0.66	0.67	0.85	3.33	3.1	0.004	0.57	0.0	0.04	16.52	0.00	2.535	5.27	2.19	2.7	97.3	0.0	0.91	0.68	0.68	0.85	3.17	6753	872	1	0	0	0	0	logfile
✘	8RW5	19543	2025-01-14	2024-02-02	2.94	3.11	2.94	3.1	0.003	0.54	0.0	0.04	15.69	0.00	2.179	5.79	0.29	2.5	97.5	0.0	0.66	0.67	0.85	3.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6753	872	1	0	0	0	0	logfile
✘	8VWS	43595	2024-12-31	2024-02-02	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11907	743	10	294	0	0	0	logfile

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