Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9F3F	50173	2025-05-11	2024-04-25	2.4	2.90	2.38	2.7	0.008	1.18	1.0	0.07	16.34	0.01	2.180	16.32	2.45	4.3	95.7	0.0	-0.13	0.84	0.84	3.55	2.6	0.003	0.63	0.0	0.04	17.69	0.00	2.541	8.29	3.19	3.3	96.7	0.0	1.48	0.57	0.83	0.86	3.23	7496	939	4	1	0	0	0	logfile
✔	8ZAQ	39884	2025-06-05	2024-04-25	2.6	2.80	2.61	2.8	0.003	0.59	0.0	0.04	16.95	0.01	1.092	8.94	2.39	2.6	97.4	0.0	1.48	0.69	0.89	4.17	2.8	0.004	0.57	0.0	0.04	16.83	0.01	2.607	6.41	3.29	1.6	98.4	0.0	2.53	0.28	0.68	0.89	4.51	6449	776	9	0	27	36	0	logfile
✔	9BJE	44632	2025-05-09	2024-04-25	2.58	2.76	2.58	2.8	0.005	0.73	0.0	0.05	14.26	0.01	2.243	4.53	0.88	3.1	96.9	0.0	0.30	0.40	0.84	4.81	2.8	0.004	0.60	0.0	0.04	16.61	0.01	2.530	3.82	0.44	2.7	97.3	0.0	0.91	0.41	0.41	0.87	4.85	2094	266	1	0	0	0	0	logfile
✔	9BJE	44632	2025-06-04	2024-04-25	2.58	2.76	2.58	2.8	0.005	0.73	0.0	0.05	14.26	0.01	2.243	4.53	0.88	3.1	96.9	0.0	0.30	0.40	0.84	4.81	2.8	0.004	0.56	0.0	0.04	16.88	0.01	2.565	3.82	1.32	2.7	97.3	0.0	1.02	0.34	0.41	0.87	4.93	2094	266	1	0	0	0	0	logfile
✔	9BJ3	44628	2025-05-28	2024-04-24	3.04	3.35	3.15	3.4	0.004	0.73	1.0	0.05	18.61	0.00	2.144	3.97	0.28	6.2	93.8	0.0	-1.67	0.72	0.87	2.86	3.4	0.006	0.74	0.0	0.05	16.67	0.00	2.459	2.36	3.21	8.6	91.4	0.0	-1.29	0.89	0.75	0.89	2.92	30621	3819	42	0	90	0	0	logfile
✔	8ZAB	39877	2025-05-10	2024-04-24	3.67	3.96	3.57	3.8	0.005	0.80	0.0	0.05	16.46	0.01	2.176	15.11	0.28	6.5	93.3	0.2	-1.13	0.78	0.75	2.77	3.8	0.004	0.74	0.0	0.05	17.17	0.01	2.394	13.95	5.84	6.2	93.5	0.2	-1.05	1.61	0.80	0.78	2.30	6497	846	4	0	0	0	0	logfile
✔	8ZAB	39877	2025-06-05	2024-04-24	3.67	3.96	3.57	3.8	0.005	0.80	0.0	0.05	16.46	0.01	2.176	15.11	0.28	6.5	93.3	0.2	-1.13	0.78	0.75	2.77	3.8	0.004	0.74	0.0	0.05	17.06	0.01	2.405	12.32	3.56	6.1	93.7	0.2	-0.97	1.61	0.79	0.77	2.20	6497	846	4	0	0	0	0	logfile
✔	9BJ3	44628	2025-06-26	2024-04-24	3.04	3.35	3.15	3.4	0.004	0.73	1.0	0.05	18.61	0.00	2.144	3.97	0.28	6.2	93.8	0.0	-1.67	0.72	0.87	2.86	3.4	0.005	0.69	0.0	0.05	16.62	0.00	2.482	2.27	2.93	8.1	91.9	0.0	-1.18	0.89	0.75	0.89	2.89	30621	3819	42	0	90	0	0	logfile
✔	9BiU	44602	2025-02-13	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.003	0.59	0.0	0.04	17.12	0.00	2.239	5.49	1.80	6.6	93.4	0.0	0.80	0.33	0.62	0.84	2.50	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2025-03-14	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.004	0.61	0.0	0.04	17.22	0.00	2.216	5.49	2.20	6.8	93.2	0.0	0.77	0.38	0.62	0.85	2.43	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2025-04-30	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.004	0.60	0.0	0.04	17.08	0.00	2.282	5.59	1.60	7.1	92.9	0.0	0.73	0.36	0.62	0.85	2.66	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2025-05-12	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.004	0.60	0.0	0.04	17.10	0.00	2.283	5.28	1.60	7.0	93.0	0.0	0.81	0.31	0.62	0.85	2.46	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2025-06-08	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.004	0.60	0.0	0.04	17.08	0.00	2.282	5.59	1.60	7.1	92.9	0.0	0.73	0.36	0.62	0.85	2.66	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2024-09-25	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.003	0.59	0.0	0.04	17.16	0.00	2.278	5.49	2.59	6.5	93.5	0.0	0.80	0.83	0.62	0.85	2.50	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2024-10-11	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.003	0.59	0.0	0.04	17.16	0.00	2.278	5.49	2.59	6.5	93.5	0.0	0.80	0.83	0.62	0.85	2.50	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2024-11-15	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.003	0.59	0.0	0.04	17.16	0.00	2.278	5.49	2.59	6.5	93.5	0.0	0.80	0.83	0.62	0.85	2.50	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2024-12-29	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.003	0.59	0.0	0.04	17.16	0.00	2.278	5.49	2.59	6.5	93.5	0.0	0.80	0.83	0.62	0.85	2.50	9458	595	3	0	1	0	4738	logfile
✔	9BiU	44602	2025-01-16	2024-04-24	2.9	3.33	2.90	3.2	0.003	0.56	0.0	0.04	17.10	0.00	2.204	4.85	2.00	7.0	93.0	0.0	0.77	0.63	0.84	2.63	3.2	0.003	0.59	0.0	0.04	17.12	0.00	2.239	5.49	1.80	6.6	93.4	0.0	0.80	0.33	0.62	0.84	2.50	9458	595	3	0	1	0	4738	logfile
✔	9BiS	44600	2025-01-16	2024-04-24	3.2	3.55	3.16	3.4	0.004	0.78	0.0	0.04	18.67	0.00	1.376	7.08	0.40	8.7	91.3	0.0	0.07	0.59	0.82	2.90	3.4	0.003	0.56	0.0	0.04	18.21	0.00	2.292	5.18	1.80	7.0	93.0	0.0	0.89	0.79	0.61	0.84	3.06	9444	595	3	0	1	0	4734	logfile
✔	9BiS	44600	2024-11-15	2024-04-24	3.2	3.55	3.16	3.4	0.004	0.78	0.0	0.04	18.67	0.00	1.376	7.08	0.40	8.7	91.3	0.0	0.07	0.59	0.82	2.90	3.4	0.003	0.57	0.0	0.04	18.34	0.00	2.278	4.65	1.60	7.0	93.0	0.0	0.77	0.78	0.61	0.84	3.10	9444	595	3	0	1	0	4734	logfile

• ← previous
• Page 262 of 5208
• next →