Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VVZ	43573	2025-03-13	2024-01-31	3.41	3.62	3.43	3.6	0.001	0.37	0.0	0.03	14.14	0.00	2.257	6.73	0.00	2.2	97.8	0.0	2.19	0.53	0.80	1.35	3.6	0.003	0.52	0.0	0.04	16.60	0.00	2.465	6.12	1.32	2.5	97.5	0.0	2.51	3.07	0.59	0.86	1.63	8856	1104	6	0	0	0	0	logfile
✔	8Y56	38930	2025-04-27	2024-01-31	2.83	3.24	2.97	3.1	0.006	0.73	2.0	0.04	15.56	0.00	2.279	12.30	0.98	3.1	96.9	0.0	0.73	0.59	0.76	3.30	3.2	0.003	0.62	0.0	0.04	15.48	0.00	2.412	9.45	1.37	3.8	96.2	0.0	2.46	1.91	0.54	0.75	3.37	4796	586	2	0	7	5	0	logfile
✔	8Y56	38930	2025-02-11	2024-01-31	2.83	3.24	2.98	3.1	0.006	0.73	2.0	0.04	15.56	0.00	2.279	12.30	0.98	3.1	96.9	0.0	0.73	0.59	0.76	3.30	3.2	0.004	0.61	0.0	0.04	15.48	0.00	2.521	9.66	1.96	3.6	96.4	0.0	2.33	1.91	0.54	0.75	3.31	4796	586	2	0	7	5	0	logfile
✔	8Y5H	38935	2024-12-30	2024-01-31	3.1	2.41	3.18	2.1	0.007	0.85	1.0	0.05	14.34	0.01	2.206	8.39	0.52	7.0	93.0	0.0	-1.85	0.79	0.79	3.24	2.1	0.004	0.65	0.0	0.04	16.85	0.01	2.413	5.79	3.02	5.0	95.0	0.0	0.12	0.46	0.81	0.81	1.91	12405	1562	7	0	1	1	0	logfile
✔	8Y5H	38935	2025-01-18	2024-01-31	3.1	2.41	3.18	2.1	0.007	0.85	1.0	0.05	14.34	0.01	2.206	8.39	0.52	7.0	93.0	0.0	-1.85	0.79	0.79	3.24	2.1	0.004	0.66	0.0	0.04	16.97	0.01	2.137	5.47	3.02	5.2	94.8	0.0	-0.07	0.44	0.81	0.81	2.03	12405	1562	7	0	1	1	0	logfile
✔	8Y5H	38935	2024-11-16	2024-01-31	3.1	2.41	3.18	2.1	0.007	0.85	1.0	0.05	14.34	0.01	2.206	8.39	0.52	7.0	93.0	0.0	-1.85	0.79	0.79	3.24	2.1	0.004	0.65	0.0	0.04	16.85	0.01	2.413	5.79	3.02	5.0	95.0	0.0	0.12	0.46	0.81	0.81	1.91	12405	1562	7	0	1	1	0	logfile
✔	8VVW	43571	2025-04-28	2024-01-31	3.29	3.42	3.24	3.4	0.003	0.42	0.0	0.03	13.09	0.00	2.296	5.47	0.00	2.3	97.7	0.0	2.54	0.59	0.86	1.97	3.4	0.003	0.52	0.0	0.04	16.18	0.00	2.306	7.41	2.07	2.5	97.5	0.0	2.83	1.48	0.58	0.87	2.21	7380	920	5	0	0	0	0	logfile
✔	8VVW	43571	2025-03-12	2024-01-31	3.29	3.42	3.24	3.4	0.003	0.42	0.0	0.03	13.09	0.00	2.296	5.47	0.00	2.3	97.7	0.0	2.54	0.59	0.86	1.97	3.4	0.003	0.52	0.0	0.04	16.18	0.00	2.306	7.41	2.07	2.5	97.5	0.0	2.83	1.48	0.58	0.87	2.21	7380	920	5	0	0	0	0	logfile
✔	8VVC	43550	2024-12-30	2024-01-30	4.32	4.77	4.36	4.4	0.003	0.75	0.0	0.05	14.07	0.00	2.196	13.22	0.25	7.7	92.2	0.1	-0.65	0.60	0.80	—	4.4	0.003	0.75	0.0	0.04	14.16	0.00	2.322	12.72	0.08	6.9	93.0	0.1	-0.33	0.87	0.60	0.81	—	10989	1390	1	0	0	0	0	logfile
✔	8VVC	43550	2025-01-18	2024-01-30	4.32	4.77	4.36	4.4	0.003	0.75	0.0	0.05	14.07	0.00	2.196	13.22	0.25	7.7	92.2	0.1	-0.65	0.60	0.80	—	4.4	0.003	0.73	0.0	0.04	14.10	0.00	2.336	11.73	0.00	6.5	93.4	0.1	0.02	0.52	0.60	0.81	—	10989	1390	1	0	0	0	0	logfile
✔	8VUZ	43545	2024-11-14	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.75	0.0	0.05	17.61	0.00	2.476	10.84	5.01	6.1	93.9	0.0	0.13	0.44	0.77	0.84	1.75	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2024-12-27	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.75	0.0	0.05	17.61	0.00	2.476	10.84	5.01	6.1	93.9	0.0	0.13	0.44	0.77	0.84	1.75	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2025-01-14	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.004	0.74	0.0	0.04	17.48	0.00	2.468	11.07	4.61	6.3	93.7	0.0	0.15	0.95	0.75	0.84	1.41	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2025-04-27	2024-01-30	3.95	4.14	3.94	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.74	0.0	0.04	17.59	0.00	2.494	10.23	4.48	5.6	94.4	0.0	0.21	0.96	0.75	0.84	1.45	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2024-07-19	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.004	0.71	0.0	0.04	17.50	0.00	2.080	14.58	6.85	7.0	92.9	0.1	0.04	0.40	0.78	0.85	1.79	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2024-08-03	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.75	0.0	0.05	17.61	0.00	2.476	10.84	5.01	6.1	93.9	0.0	0.13	0.44	0.77	0.84	1.75	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2024-09-24	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.75	0.0	0.05	17.61	0.00	2.476	10.84	5.01	6.1	93.9	0.0	0.13	0.44	0.77	0.84	1.75	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2025-03-11	2024-01-30	3.95	4.14	3.94	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.73	0.0	0.04	17.49	0.00	2.475	10.46	4.35	5.8	94.2	0.0	0.23	0.95	0.75	0.84	1.62	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2025-02-11	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.004	0.74	0.0	0.04	17.48	0.00	2.468	11.07	4.61	6.3	93.7	0.0	0.15	0.95	0.75	0.84	1.41	6626	869	4	0	0	0	0	logfile
✔	8VUZ	43545	2024-10-10	2024-01-30	3.95	4.14	3.96	4.1	0.012	0.81	0.0	0.04	17.38	0.01	2.050	13.66	0.13	6.8	93.1	0.1	-0.21	0.74	0.85	2.04	4.1	0.003	0.75	0.0	0.05	17.61	0.00	2.476	10.84	5.01	6.1	93.9	0.0	0.13	0.44	0.77	0.84	1.75	6626	869	4	0	0	0	0	logfile

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