Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9Bi9	44577	2024-11-14	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.003	0.58	0.0	0.04	14.98	0.00	2.405	3.53	0.48	3.2	96.8	0.0	0.63	2.18	0.75	0.79	2.65	7578	497	2	0	1	0	3712	logfile
✔	8Z9E	39861	2024-09-28	2024-04-23	3.13	3.34	3.22	3.3	0.006	1.06	1.0	0.06	18.26	0.01	2.136	7.61	0.69	4.3	95.3	0.4	-2.57	0.70	0.80	2.47	3.3	0.003	0.62	0.0	0.04	18.49	0.00	2.007	8.91	3.17	3.1	96.9	0.0	-0.02	0.49	0.71	0.83	2.62	20770	2484	20	73	7	0	0	logfile
✔	8Z9E	39861	2025-05-20	2024-04-23	3.13	3.34	3.22	3.3	0.009	1.18	1.0	0.06	18.26	0.01	2.136	7.61	0.69	4.3	95.3	0.4	-2.57	0.70	0.80	2.47	3.4	0.004	0.77	0.0	0.04	18.50	0.00	2.026	8.93	2.98	2.8	97.2	0.0	0.15	0.48	0.71	0.82	2.63	20770	2484	20	73	7	0	0	logfile
✘	8Z9C	39859	2025-06-19	2024-04-23	3.01	3.22	3.09	3.2	0.009	1.27	0.0	0.07	18.28	0.01	2.128	9.71	0.70	5.4	94.3	0.4	-3.22	0.70	0.81	2.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	23182	2727	23	89	9	0	0	logfile
✔	8Z9C	39859	2024-09-29	2024-04-23	3.01	3.22	3.09	3.2	0.009	1.19	0.0	0.07	18.28	0.01	2.128	9.71	0.70	5.4	94.3	0.4	-3.22	0.70	0.81	2.61	3.2	0.004	0.77	2.0	0.04	18.35	0.00	2.048	7.76	1.89	3.3	96.6	0.1	-0.20	0.47	0.72	0.84	2.64	23182	2727	23	89	9	0	0	logfile
✘	8Z9C	39859	2025-01-25	2024-04-23	3.01	3.22	3.09	3.2	0.009	1.19	0.0	0.07	18.28	0.01	2.128	9.71	0.70	5.4	94.3	0.4	-3.22	0.70	0.81	2.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	23182	2727	23	89	9	0	0	logfile
✘	8Z9C	39859	2025-05-22	2024-04-23	3.01	3.22	3.09	3.2	0.009	1.27	0.0	0.07	18.28	0.01	2.128	9.71	0.70	5.4	94.3	0.4	-3.22	0.70	0.81	2.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	23182	2727	23	89	9	0	0	logfile
✔	8Z9Y	39872	2025-06-15	2024-04-23	2.5	2.86	2.66	2.8	0.003	0.65	0.0	0.04	16.90	0.00	2.160	9.43	0.11	6.9	93.0	0.1	0.55	0.62	0.76	2.65	2.8	0.004	0.82	1.0	0.05	17.78	0.01	2.128	7.09	2.80	6.5	93.5	0.1	0.43	0.42	0.66	0.79	2.76	16671	1980	6	0	0	0	0	logfile
✔	9Bi9	44577	2025-06-06	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.003	0.59	0.0	0.04	14.99	0.01	2.390	4.31	0.72	3.0	97.0	0.0	0.65	2.18	0.74	0.79	2.31	7578	497	2	0	1	0	3712	logfile
✔	9Bi9	44577	2025-04-28	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.003	0.59	0.0	0.04	14.99	0.01	2.390	4.31	0.72	3.0	97.0	0.0	0.65	2.18	0.74	0.79	2.31	7578	497	2	0	1	0	3712	logfile
✔	8Z9Y	39872	2025-01-21	2024-04-23	2.5	2.86	2.66	2.8	0.003	0.65	0.0	0.04	16.90	0.00	2.160	9.43	0.11	6.9	93.0	0.1	0.55	0.62	0.76	2.65	2.8	0.003	0.63	0.0	0.04	17.78	0.01	2.133	7.18	2.41	6.3	93.6	0.1	0.54	0.42	0.66	0.79	2.66	16671	1980	6	0	0	0	0	logfile
✔	8Z9Y	39872	2024-12-31	2024-04-23	2.5	2.86	2.66	2.8	0.003	0.65	0.0	0.04	16.90	0.00	2.160	9.43	0.11	6.9	93.0	0.1	0.55	0.62	0.76	2.65	2.8	0.003	0.81	1.0	0.05	17.82	0.01	2.345	7.24	2.86	6.7	93.2	0.1	0.33	0.41	0.66	0.80	2.79	16671	1980	6	0	0	0	0	logfile
✔	8Z9Y	39872	2025-05-18	2024-04-23	2.5	2.86	2.66	2.8	0.003	0.65	0.0	0.04	16.90	0.00	2.160	9.43	0.11	6.9	93.0	0.1	0.55	0.62	0.76	2.65	2.8	0.003	0.62	0.0	0.04	17.78	0.01	2.135	7.15	2.07	6.3	93.7	0.1	0.55	0.42	0.66	0.79	2.66	16671	1980	6	0	0	0	0	logfile
✔	9Bi9	44577	2025-05-11	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.004	0.62	0.0	0.04	14.90	0.01	2.378	5.10	0.96	4.0	96.0	0.0	0.53	2.17	0.75	0.79	2.50	7578	497	2	0	1	0	3712	logfile
✔	9Bi9	44577	2025-01-14	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.004	0.62	0.0	0.04	14.90	0.01	2.378	5.10	0.96	4.0	96.0	0.0	0.53	2.17	0.75	0.79	2.50	7578	497	2	0	1	0	3712	logfile
✔	9Bi9	44577	2025-02-12	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.004	0.62	0.0	0.04	14.90	0.01	2.378	5.10	0.96	4.0	96.0	0.0	0.53	2.17	0.75	0.79	2.50	7578	497	2	0	1	0	3712	logfile
✔	9Bi9	44577	2025-03-12	2024-04-23	2.61	3.67	2.64	3.4	0.003	0.53	0.0	0.04	12.52	0.00	2.243	5.09	0.00	4.4	95.6	0.0	0.82	0.72	0.75	3.46	3.4	0.003	0.59	0.0	0.04	14.99	0.01	2.390	4.31	0.72	3.0	97.0	0.0	0.65	2.18	0.74	0.79	2.31	7578	497	2	0	1	0	3712	logfile
✔	8Z9M	39863	2024-09-29	2024-04-23	3.3	2.26	—	2.0	0.002	0.51	1.0	0.04	14.42	0.00	2.228	4.73	0.24	3.5	96.5	0.0	0.06	0.78	0.77	1.95	2.1	0.005	0.65	0.0	0.04	16.64	0.01	2.495	3.92	1.67	4.8	95.2	0.0	-0.24	0.50	0.82	0.83	2.75	22016	2786	4	0	0	0	0	logfile
✔	8Z9M	39863	2025-06-19	2024-04-23	3.3	2.26	—	2.0	0.005	0.62	1.0	0.04	14.42	0.00	2.228	4.73	0.24	3.5	96.5	0.0	0.06	0.78	0.77	1.95	2.1	0.003	0.57	0.0	0.04	16.73	0.00	2.498	3.58	1.80	3.9	96.1	0.0	0.03	0.49	0.82	0.82	2.58	22016	2786	4	0	0	0	0	logfile
✔	8Z9M	39863	2025-05-21	2024-04-23	3.3	2.26	—	2.0	0.005	0.62	1.0	0.04	14.42	0.00	2.228	4.73	0.24	3.5	96.5	0.0	0.06	0.78	0.77	1.95	2.1	0.004	0.63	0.0	0.04	16.69	0.00	2.496	3.74	1.96	4.7	95.3	0.0	-0.17	0.49	0.82	0.83	2.64	22016	2786	4	0	0	0	0	logfile

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