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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 9BHT | 44552 | 2024-11-17 | 2024-04-22 | 3.26 | 4.41 | 3.27 | 3.3 | 0.006 | 1.13 | 4.0 | 0.05 | 19.39 | 0.01 | 2.058 | 21.47 | 2.05 | 6.0 | 93.0 | 1.0 | -0.68 | 0.84 | 0.70 | 1.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12725 | 1562 | 12 | 4 | 2 | 0 | 0 | logfile |
✘ | 9BHT | 44552 | 2024-09-26 | 2024-04-22 | 3.26 | 4.41 | 3.27 | 3.3 | 0.006 | 1.13 | 4.0 | 0.05 | 19.39 | 0.01 | 2.058 | 21.47 | 2.05 | 6.0 | 93.0 | 1.0 | -0.68 | 0.84 | 0.70 | 1.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12725 | 1562 | 12 | 4 | 2 | 0 | 0 | logfile |
✔ | 9BHW | 44555 | 2025-04-29 | 2024-04-22 | 2.72 | 3.56 | 2.84 | 3.3 | 0.005 | 0.72 | 0.0 | 0.05 | 14.14 | 0.00 | 2.158 | 6.79 | 0.31 | 2.0 | 98.0 | 0.0 | 0.77 | 0.85 | 0.86 | 4.93 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 15.92 | 0.00 | 2.467 | 4.90 | 1.33 | 2.5 | 97.5 | 0.0 | 1.96 | 0.66 | 0.78 | 0.84 | 3.93 | 8759 | 1071 | 8 | 4 | 0 | 0 | 0 | logfile |
✔ | 9BHW | 44555 | 2025-02-13 | 2024-04-22 | 2.72 | 3.56 | 2.84 | 3.3 | 0.005 | 0.72 | 0.0 | 0.05 | 14.14 | 0.00 | 2.158 | 6.79 | 0.31 | 2.0 | 98.0 | 0.0 | 0.77 | 0.85 | 0.86 | 4.93 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.464 | 5.02 | 1.13 | 2.4 | 97.6 | 0.0 | 1.94 | 0.67 | 0.79 | 0.85 | 4.16 | 8759 | 1071 | 8 | 4 | 0 | 0 | 0 | logfile |
✔ | 9BHW | 44555 | 2025-01-15 | 2024-04-22 | 2.72 | 3.56 | 2.84 | 3.3 | 0.005 | 0.72 | 0.0 | 0.05 | 14.14 | 0.00 | 2.158 | 6.79 | 0.31 | 2.0 | 98.0 | 0.0 | 0.77 | 0.85 | 0.86 | 4.93 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.464 | 5.02 | 1.13 | 2.4 | 97.6 | 0.0 | 1.94 | 0.67 | 0.79 | 0.85 | 4.16 | 8759 | 1071 | 8 | 4 | 0 | 0 | 0 | logfile |
✔ | 9BHW | 44555 | 2025-03-13 | 2024-04-22 | 2.72 | 3.56 | 2.84 | 3.3 | 0.005 | 0.72 | 0.0 | 0.05 | 14.14 | 0.00 | 2.158 | 6.79 | 0.31 | 2.0 | 98.0 | 0.0 | 0.77 | 0.85 | 0.86 | 4.93 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 15.92 | 0.00 | 2.467 | 4.90 | 1.33 | 2.5 | 97.5 | 0.0 | 1.96 | 0.66 | 0.78 | 0.84 | 3.93 | 8759 | 1071 | 8 | 4 | 0 | 0 | 0 | logfile |
✔ | 9BHX | 44556 | 2025-03-13 | 2024-04-22 | 3.94 | 4.14 | 3.92 | 4.1 | 0.013 | 1.34 | 0.0 | 0.05 | 17.52 | 0.01 | 1.661 | 20.33 | 0.44 | 6.7 | 92.8 | 0.5 | -1.38 | 0.72 | 0.75 | 1.79 | 4.1 | 0.005 | 0.80 | 0.0 | 0.05 | 18.17 | 0.01 | 2.479 | 13.49 | 4.87 | 8.5 | 91.3 | 0.2 | -1.52 | 0.55 | 0.73 | 0.77 | 1.90 | 8376 | 1048 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BHX | 44556 | 2025-06-07 | 2024-04-22 | 3.94 | 4.14 | 3.92 | 4.1 | 0.013 | 1.34 | 0.0 | 0.05 | 17.52 | 0.01 | 1.661 | 20.33 | 0.44 | 6.7 | 92.8 | 0.5 | -1.38 | 0.72 | 0.75 | 1.79 | 4.1 | 0.006 | 0.82 | 0.0 | 0.05 | 18.23 | 0.01 | 2.478 | 14.04 | 5.09 | 9.1 | 90.7 | 0.2 | -1.42 | 0.57 | 0.74 | 0.80 | 1.78 | 8376 | 1048 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BHX | 44556 | 2025-05-11 | 2024-04-22 | 3.94 | 4.14 | 3.92 | 4.1 | 0.013 | 1.34 | 0.0 | 0.05 | 17.52 | 0.01 | 1.661 | 20.33 | 0.44 | 6.7 | 92.8 | 0.5 | -1.38 | 0.72 | 0.75 | 1.79 | 4.1 | 0.005 | 0.81 | 0.0 | 0.05 | 18.07 | 0.01 | 2.469 | 13.61 | 5.20 | 8.0 | 91.8 | 0.2 | -1.31 | 0.54 | 0.73 | 0.76 | 1.82 | 8376 | 1048 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BHX | 44556 | 2025-04-29 | 2024-04-22 | 3.94 | 4.14 | 3.92 | 4.1 | 0.013 | 1.34 | 0.0 | 0.05 | 17.52 | 0.01 | 1.661 | 20.33 | 0.44 | 6.7 | 92.8 | 0.5 | -1.38 | 0.72 | 0.75 | 1.79 | 4.1 | 0.006 | 0.82 | 0.0 | 0.05 | 18.23 | 0.01 | 2.478 | 14.04 | 5.09 | 9.1 | 90.7 | 0.2 | -1.42 | 0.57 | 0.74 | 0.80 | 1.78 | 8376 | 1048 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BHX | 44556 | 2025-02-13 | 2024-04-22 | 3.94 | 4.14 | 3.93 | 4.1 | 0.013 | 1.34 | 0.0 | 0.05 | 17.52 | 0.01 | 1.661 | 20.33 | 0.44 | 6.7 | 92.8 | 0.5 | -1.38 | 0.72 | 0.75 | 1.79 | 4.1 | 0.004 | 0.75 | 0.0 | 0.04 | 18.07 | 0.01 | 2.473 | 11.68 | 4.98 | 7.9 | 91.9 | 0.2 | -1.28 | 0.56 | 0.73 | 0.76 | 1.62 | 8376 | 1048 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Z94 | 39854 | 2025-06-04 | 2024-04-22 | 4.56 | 3.17 | 2.04 | 4.4 | 0.007 | 1.42 | 0.0 | 0.08 | 16.60 | 0.01 | 2.126 | 146.46 | 0.00 | 45.0 | 55.0 | 0.0 | -7.88 | 0.28 | 0.46 | — | 4.2 | 0.007 | 1.54 | 0.0 | 0.06 | 18.90 | 0.01 | 2.428 | 61.62 | 0.00 | 50.0 | 50.0 | 0.0 | -6.85 | 1.97 | 0.29 | 0.50 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Z94 | 39854 | 2025-05-09 | 2024-04-22 | 4.56 | 3.17 | 2.04 | 4.4 | 0.007 | 1.42 | 0.0 | 0.08 | 16.60 | 0.01 | 2.126 | 146.46 | 0.00 | 45.0 | 55.0 | 0.0 | -7.88 | 0.28 | 0.46 | — | 4.2 | 0.008 | 1.56 | 0.0 | 0.07 | 16.45 | 0.01 | 2.452 | 53.54 | 0.00 | 50.0 | 50.0 | 0.0 | -8.01 | 1.97 | 0.29 | 0.49 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9F2A | 50143 | 2025-06-12 | 2024-04-22 | 2.91 | 2.22 | — | 2.0 | 0.004 | 0.57 | 0.0 | 0.04 | 12.98 | 0.01 | 2.218 | 3.12 | 0.00 | 2.7 | 97.3 | 0.0 | 0.23 | 0.82 | 0.82 | 3.64 | 2.0 | 0.004 | 0.60 | 0.0 | 0.05 | 16.30 | 0.01 | 2.170 | 3.45 | 1.23 | 3.0 | 97.0 | 0.0 | 0.34 | 0.37 | 0.82 | 0.82 | 3.01 | 13557 | 1692 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 9F2A | 50143 | 2025-05-15 | 2024-04-22 | 2.91 | 2.22 | — | 2.0 | 0.004 | 0.57 | 0.0 | 0.04 | 12.98 | 0.01 | 2.218 | 3.12 | 0.00 | 2.7 | 97.3 | 0.0 | 0.23 | 0.82 | 0.82 | 3.64 | 2.0 | 0.004 | 0.61 | 0.0 | 0.05 | 16.34 | 0.01 | 2.143 | 3.70 | 1.16 | 2.8 | 97.2 | 0.0 | 0.34 | 0.37 | 0.82 | 0.82 | 2.95 | 13557 | 1692 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 9F2A | 50143 | 2025-01-19 | 2024-04-22 | 2.91 | 2.22 | — | 2.0 | 0.004 | 0.55 | 0.0 | 0.04 | 12.98 | 0.01 | 2.218 | 3.12 | 0.00 | 2.7 | 97.3 | 0.0 | 0.23 | 0.82 | 0.82 | 3.64 | 2.0 | 0.004 | 0.58 | 0.0 | 0.05 | 16.42 | 0.01 | 2.146 | 3.37 | 0.96 | 3.0 | 97.0 | 0.0 | 0.40 | 0.37 | 0.82 | 0.82 | 3.00 | 13557 | 1692 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 9F2A | 50143 | 2024-12-30 | 2024-04-22 | 2.91 | 2.22 | — | 2.0 | 0.004 | 0.55 | 0.0 | 0.04 | 12.98 | 0.01 | 2.218 | 3.12 | 0.00 | 2.7 | 97.3 | 0.0 | 0.23 | 0.82 | 0.82 | 3.64 | 2.0 | 0.003 | 0.58 | 0.0 | 0.05 | 16.34 | 0.01 | 2.149 | 3.56 | 1.03 | 2.8 | 97.2 | 0.0 | 0.46 | 0.38 | 0.82 | 0.82 | 3.11 | 13557 | 1692 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 8Z99 | 39857 | 2024-09-30 | 2024-04-22 | 3.2 | 3.46 | 3.29 | 3.5 | 0.009 | 1.27 | 1.0 | 0.08 | 17.28 | 0.02 | 2.058 | 7.16 | 2.03 | 5.2 | 94.8 | 0.0 | -2.48 | 0.71 | 0.81 | 2.51 | 3.5 | 0.005 | 0.77 | 1.0 | 0.04 | 17.63 | 0.00 | 1.919 | 11.00 | 3.37 | 4.4 | 95.6 | 0.0 | -0.50 | 1.05 | 0.74 | 0.84 | 2.48 | 25517 | 3030 | 24 | 100 | 9 | 0 | 0 | logfile |
✔ | 8Z99 | 39857 | 2025-05-24 | 2024-04-22 | 3.2 | 3.46 | 3.29 | 3.5 | 0.009 | 1.34 | 1.0 | 0.08 | 17.28 | 0.02 | 2.058 | 7.16 | 2.03 | 5.2 | 94.8 | 0.0 | -2.48 | 0.71 | 0.81 | 2.51 | 3.5 | 0.005 | 0.67 | 0.0 | 0.04 | 17.68 | 0.00 | 1.931 | 9.79 | 3.09 | 3.9 | 96.1 | 0.0 | -0.32 | 1.05 | 0.75 | 0.84 | 2.35 | 25517 | 3030 | 24 | 100 | 9 | 0 | 0 | logfile |
✔ | 8Z99 | 39857 | 2025-06-21 | 2024-04-22 | 3.2 | 3.46 | 3.29 | 3.5 | 0.009 | 1.34 | 1.0 | 0.08 | 17.28 | 0.02 | 2.058 | 7.16 | 2.03 | 5.2 | 94.8 | 0.0 | -2.48 | 0.71 | 0.81 | 2.51 | 3.5 | 0.005 | 0.66 | 0.0 | 0.04 | 17.66 | 0.00 | 1.930 | 9.60 | 3.33 | 4.1 | 95.9 | 0.0 | -0.33 | 1.05 | 0.74 | 0.84 | 2.30 | 25517 | 3030 | 24 | 100 | 9 | 0 | 0 | logfile |