Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Z94	39854	2025-06-04	2024-04-22	4.56	3.17	2.04	4.4	0.007	1.42	0.0	0.08	16.60	0.01	2.126	146.46	0.00	45.0	55.0	0.0	-7.88	0.28	0.46	—	4.2	0.007	1.54	0.0	0.06	18.90	0.01	2.428	61.62	0.00	50.0	50.0	0.0	-6.85	1.97	0.29	0.50	—	507	66	3	0	0	0	0	logfile
✔	9Bi4	44558	2025-06-14	2024-04-22	3.2	3.36	3.16	3.3	0.008	1.03	2.0	0.06	18.97	0.01	1.821	11.38	7.50	5.4	94.1	0.4	-2.14	0.77	0.78	3.36	3.3	0.007	0.67	0.0	0.05	19.02	0.00	1.906	5.21	3.57	5.4	94.6	0.1	0.22	1.16	0.81	0.88	2.96	15869	1881	10	44	8	0	0	logfile
✔	9F2A	50143	2025-01-19	2024-04-22	2.91	2.22	—	2.0	0.004	0.55	0.0	0.04	12.98	0.01	2.218	3.12	0.00	2.7	97.3	0.0	0.23	0.82	0.82	3.64	2.0	0.004	0.58	0.0	0.05	16.42	0.01	2.146	3.37	0.96	3.0	97.0	0.0	0.40	0.37	0.82	0.82	3.00	13557	1692	5	0	4	0	0	logfile
✔	9F2A	50143	2025-06-12	2024-04-22	2.91	2.22	—	2.0	0.004	0.57	0.0	0.04	12.98	0.01	2.218	3.12	0.00	2.7	97.3	0.0	0.23	0.82	0.82	3.64	2.0	0.004	0.60	0.0	0.05	16.30	0.01	2.170	3.45	1.23	3.0	97.0	0.0	0.34	0.37	0.82	0.82	3.01	13557	1692	5	0	4	0	0	logfile
✔	9F2A	50143	2024-12-30	2024-04-22	2.91	2.22	—	2.0	0.004	0.55	0.0	0.04	12.98	0.01	2.218	3.12	0.00	2.7	97.3	0.0	0.23	0.82	0.82	3.64	2.0	0.003	0.58	0.0	0.05	16.34	0.01	2.149	3.56	1.03	2.8	97.2	0.0	0.46	0.38	0.82	0.82	3.11	13557	1692	5	0	4	0	0	logfile
✔	9Bi4	44558	2025-05-17	2024-04-22	3.2	3.36	3.16	3.3	0.008	1.03	2.0	0.06	18.97	0.01	1.821	11.38	7.50	5.4	94.1	0.4	-2.14	0.77	0.78	3.36	3.3	0.004	0.59	0.0	0.04	18.84	0.00	1.941	5.05	3.45	4.7	95.2	0.1	0.54	1.16	0.80	0.87	2.82	15869	1881	10	44	8	0	0	logfile
✔	9F2A	50143	2025-05-15	2024-04-22	2.91	2.22	—	2.0	0.004	0.57	0.0	0.04	12.98	0.01	2.218	3.12	0.00	2.7	97.3	0.0	0.23	0.82	0.82	3.64	2.0	0.004	0.61	0.0	0.05	16.34	0.01	2.143	3.70	1.16	2.8	97.2	0.0	0.34	0.37	0.82	0.82	2.95	13557	1692	5	0	4	0	0	logfile
✔	8Z8J	39848	2024-12-31	2024-04-22	3.16	3.46	3.17	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.4	0.002	0.58	0.0	0.04	15.32	0.00	2.337	8.07	1.20	4.7	95.3	0.0	0.31	0.38	0.81	0.89	2.31	13766	1665	5	15	0	0	0	logfile
✔	8Z8J	39848	2024-10-13	2024-04-22	3.16	3.46	3.17	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.4	0.002	0.58	0.0	0.04	15.32	0.00	2.337	8.07	1.20	4.7	95.3	0.0	0.31	0.38	0.81	0.89	2.31	13766	1665	5	15	0	0	0	logfile
✔	9BHW	44555	2024-11-15	2024-04-22	2.72	3.56	2.84	3.3	0.005	0.72	0.0	0.05	14.14	0.00	2.158	6.79	0.31	2.0	98.0	0.0	0.77	0.85	0.86	4.93	3.3	0.004	0.62	0.0	0.04	15.95	0.00	2.467	4.73	1.13	2.1	97.9	0.0	2.06	0.68	0.79	0.85	3.99	8759	1071	8	4	0	0	0	logfile
✔	9BHW	44555	2024-10-10	2024-04-22	2.72	3.56	2.84	3.3	0.005	0.72	0.0	0.05	14.14	0.00	2.158	6.79	0.31	2.0	98.0	0.0	0.77	0.85	0.86	4.93	3.3	0.004	0.62	0.0	0.04	15.95	0.00	2.467	4.73	1.13	2.1	97.9	0.0	2.06	0.68	0.79	0.85	3.99	8759	1071	8	4	0	0	0	logfile
✔	9BHW	44555	2024-09-24	2024-04-22	2.72	3.56	2.84	3.3	0.005	0.72	0.0	0.05	14.14	0.00	2.158	6.79	0.31	2.0	98.0	0.0	0.77	0.85	0.86	4.93	3.3	0.004	0.62	0.0	0.04	15.95	0.00	2.467	4.73	1.13	2.1	97.9	0.0	2.06	0.68	0.79	0.85	3.99	8759	1071	8	4	0	0	0	logfile
✔	9BHW	44555	2025-06-07	2024-04-22	2.72	3.56	2.84	3.3	0.005	0.72	0.0	0.05	14.14	0.00	2.158	6.79	0.31	2.0	98.0	0.0	0.77	0.85	0.86	4.93	3.3	0.004	0.61	0.0	0.04	15.92	0.00	2.467	4.90	1.33	2.5	97.5	0.0	1.96	0.66	0.78	0.84	3.93	8759	1071	8	4	0	0	0	logfile
✔	9BHW	44555	2025-05-12	2024-04-22	2.72	3.56	2.84	3.3	0.005	0.72	0.0	0.05	14.14	0.00	2.158	6.79	0.31	2.0	98.0	0.0	0.77	0.85	0.86	4.93	3.3	0.004	0.63	0.0	0.04	15.95	0.00	2.464	5.02	1.13	2.4	97.6	0.0	1.94	0.67	0.79	0.85	4.16	8759	1071	8	4	0	0	0	logfile
✔	9BHW	44555	2024-12-28	2024-04-22	2.72	3.56	2.84	3.3	0.005	0.72	0.0	0.05	14.14	0.00	2.158	6.79	0.31	2.0	98.0	0.0	0.77	0.85	0.86	4.93	3.3	0.004	0.62	0.0	0.04	15.95	0.00	2.467	4.73	1.13	2.1	97.9	0.0	2.06	0.68	0.79	0.85	3.99	8759	1071	8	4	0	0	0	logfile
✔	8Z8J	39848	2025-01-20	2024-04-22	3.16	3.46	3.17	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.4	0.002	0.57	0.0	0.04	15.13	0.00	2.442	7.96	1.20	4.3	95.7	0.0	0.36	0.37	0.80	0.89	2.13	13766	1665	5	15	0	0	0	logfile
✔	8Z8J	39848	2025-05-16	2024-04-22	3.16	3.46	3.18	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.3	0.002	0.57	0.0	0.04	15.13	0.00	2.442	7.96	1.20	4.3	95.7	0.0	0.36	0.37	0.80	0.89	2.13	13766	1665	5	15	0	0	0	logfile
✔	8Z8J	39848	2025-06-13	2024-04-22	3.16	3.46	3.18	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.3	0.002	0.59	0.0	0.04	15.27	0.00	2.339	8.03	1.13	4.3	95.7	0.0	0.30	0.38	0.80	0.89	2.27	13766	1665	5	15	0	0	0	logfile
✔	8Z8J	39848	2024-09-27	2024-04-22	3.16	3.46	3.17	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.4	0.002	0.58	0.0	0.04	15.32	0.00	2.337	8.07	1.20	4.7	95.3	0.0	0.31	0.38	0.81	0.89	2.31	13766	1665	5	15	0	0	0	logfile
✔	8Z8J	39848	2024-11-17	2024-04-22	3.16	3.46	3.17	3.4	0.002	0.55	0.0	0.04	13.58	0.01	2.218	9.57	0.00	4.7	95.3	0.0	-0.26	0.79	0.87	2.49	3.4	0.002	0.58	0.0	0.04	15.32	0.00	2.337	8.07	1.20	4.7	95.3	0.0	0.31	0.38	0.81	0.89	2.31	13766	1665	5	15	0	0	0	logfile

• ← previous
• Page 271 of 5208
• next →