Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XEJ	38291	2025-03-12	2023-12-12	3.66	3.95	3.64	3.9	0.004	0.84	0.0	0.04	13.95	0.00	2.222	7.98	3.64	4.9	95.1	0.0	0.15	0.66	0.77	1.42	3.9	0.006	0.78	0.0	0.04	15.99	0.00	2.431	7.00	4.42	5.0	95.0	0.0	1.42	2.84	0.70	0.81	1.89	7153	916	5	0	1	0	0	logfile
✔	8XEJ	38291	2025-02-12	2023-12-12	3.66	3.95	3.64	3.9	0.004	0.84	0.0	0.04	13.95	0.00	2.222	7.98	3.64	4.9	95.1	0.0	0.15	0.66	0.77	1.42	3.9	0.003	0.73	0.0	0.04	15.82	0.00	2.452	6.72	4.68	4.0	96.0	0.0	1.52	2.84	0.70	0.80	1.68	7153	916	5	0	1	0	0	logfile
✘	8VBE	43122	2025-02-12	2023-12-12	2.6	3.21	2.56	3.1	0.004	0.68	0.0	0.05	19.82	0.00	2.052	4.72	4.46	4.0	95.4	0.5	-0.35	0.79	0.86	3.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8421	931	4	39	3	0	0	logfile
✔	8VB8	43116	2025-02-13	2023-12-12	3.0	3.58	2.96	3.4	0.004	0.66	0.0	0.05	21.08	0.01	2.019	7.50	4.88	5.2	94.6	0.2	-1.07	0.84	0.89	2.80	3.4	0.004	0.90	0.0	0.04	20.74	0.00	1.025	5.88	2.26	5.0	94.8	0.2	-0.07	0.30	0.83	0.89	2.63	8511	951	4	37	3	0	0	logfile
✔	8REZ	19113	2025-02-13	2023-12-12	3.3	3.50	3.27	3.5	0.004	0.93	4.0	0.05	15.79	0.01	2.191	15.88	0.52	7.5	91.8	0.7	0.15	0.56	0.75	0.85	3.5	0.003	0.63	0.0	0.04	16.88	0.00	2.385	8.75	1.97	5.9	93.9	0.2	1.07	0.53	0.57	0.79	0.90	8802	1144	2	0	0	0	0	logfile
✔	8REZ	19113	2025-01-15	2023-12-12	3.3	3.50	3.27	3.5	0.004	0.93	4.0	0.05	15.79	0.01	2.191	15.88	0.52	7.5	91.8	0.7	0.15	0.56	0.75	0.85	3.5	0.003	0.63	0.0	0.04	16.88	0.00	2.385	8.75	1.97	5.9	93.9	0.2	1.07	0.53	0.57	0.79	0.90	8802	1144	2	0	0	0	0	logfile
✔	8XEK	38292	2024-12-29	2023-12-12	2.9	3.42	2.88	3.2	0.004	0.58	0.0	0.04	14.01	0.00	2.081	4.16	0.22	2.9	97.1	0.0	0.38	0.85	0.90	4.28	3.2	0.003	0.55	0.0	0.04	14.94	0.00	2.151	17.51	1.32	3.5	96.5	0.0	0.41	0.77	0.84	0.90	3.72	10130	1073	2	0	0	0	1840	logfile
✘	8VBE	43122	2025-01-15	2023-12-12	2.6	3.21	2.56	3.1	0.004	0.68	0.0	0.05	19.82	0.00	2.052	4.72	4.46	4.0	95.4	0.5	-0.35	0.79	0.86	3.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8421	931	4	39	3	0	0	logfile
✔	8REZ	19113	2025-03-13	2023-12-12	3.3	3.50	3.26	3.5	0.004	0.93	4.0	0.05	15.79	0.01	2.191	15.88	0.52	7.5	91.8	0.7	0.15	0.56	0.75	0.85	3.5	0.004	1.07	1.0	0.04	16.73	0.01	2.265	9.42	1.66	6.1	93.6	0.3	0.92	0.53	0.58	0.80	1.00	8802	1144	2	0	0	0	0	logfile
✔	8RFB	19117	2025-03-06	2023-12-12	4.01	4.26	4.01	4.2	0.015	1.68	0.0	0.10	11.24	0.01	2.144	5.97	2.04	2.7	97.3	0.0	0.42	0.73	0.77	—	4.2	0.003	0.67	0.0	0.04	13.01	0.00	2.484	7.96	0.00	3.2	96.8	0.0	0.41	0.92	0.71	0.78	—	4632	597	1	0	0	0	0	logfile
✔	8RFB	19117	2024-09-23	2023-12-12	4.01	4.26	4.04	4.2	0.015	1.68	0.0	0.10	11.24	0.01	2.144	5.97	2.04	2.7	97.3	0.0	0.42	0.73	0.77	—	4.2	0.004	0.70	0.0	0.05	13.16	0.00	1.806	9.62	0.00	3.4	96.6	0.0	0.08	0.92	0.72	0.79	—	4632	597	1	0	0	0	0	logfile
✔	8RFB	19117	2024-10-09	2023-12-12	4.01	4.26	4.04	4.2	0.015	1.68	0.0	0.10	11.24	0.01	2.144	5.97	2.04	2.7	97.3	0.0	0.42	0.73	0.77	—	4.2	0.004	0.70	0.0	0.05	13.16	0.00	1.806	9.62	0.00	3.4	96.6	0.0	0.08	0.92	0.72	0.79	—	4632	597	1	0	0	0	0	logfile
✔	8RFB	19117	2024-11-14	2023-12-12	4.01	4.26	4.04	4.2	0.015	1.68	0.0	0.10	11.24	0.01	2.144	5.97	2.04	2.7	97.3	0.0	0.42	0.73	0.77	—	4.2	0.004	0.70	0.0	0.05	13.16	0.00	1.806	9.62	0.00	3.4	96.6	0.0	0.08	0.92	0.72	0.79	—	4632	597	1	0	0	0	0	logfile
✔	8RFB	19117	2024-12-27	2023-12-12	4.01	4.26	4.04	4.2	0.015	1.68	0.0	0.10	11.24	0.01	2.144	5.97	2.04	2.7	97.3	0.0	0.42	0.73	0.77	—	4.2	0.004	0.70	0.0	0.05	13.16	0.00	1.806	9.62	0.00	3.4	96.6	0.0	0.08	0.92	0.72	0.79	—	4632	597	1	0	0	0	0	logfile
✔	8VB8	43116	2024-12-28	2023-12-12	3.0	3.58	2.96	3.4	0.004	0.66	0.0	0.05	21.08	0.01	2.019	7.50	4.88	5.2	94.6	0.2	-1.07	0.84	0.89	2.80	3.4	0.003	0.57	0.0	0.04	20.69	0.00	2.040	5.88	2.38	5.1	94.7	0.2	-0.06	0.30	0.83	0.89	2.59	8511	951	4	37	3	0	0	logfile
✔	8VB8	43116	2025-03-13	2023-12-12	3.0	3.58	2.96	3.4	0.004	0.66	0.0	0.05	21.08	0.01	2.019	7.50	4.88	5.2	94.6	0.2	-1.07	0.84	0.89	2.80	3.4	0.004	0.59	0.0	0.04	20.70	0.00	2.029	5.76	2.02	5.3	94.5	0.2	-0.08	0.30	0.83	0.89	2.57	8511	951	4	37	3	0	0	logfile
✔	8VBE	43122	2024-12-28	2023-12-12	2.6	3.21	2.56	3.1	0.004	0.68	0.0	0.05	19.82	0.00	2.052	4.72	4.46	4.0	95.4	0.5	-0.35	0.79	0.86	3.45	3.0	0.003	0.54	0.0	0.04	19.47	0.00	2.050	4.06	3.26	4.4	95.4	0.1	0.15	1.20	0.79	0.86	3.24	8421	931	4	39	3	0	0	logfile
✔	8RFJ	19125	2025-01-26	2023-12-12	3.18	3.67	3.38	2.1	0.003	0.55	0.0	0.04	16.98	0.00	2.105	10.24	0.00	2.0	98.0	0.0	0.80	0.89	0.81	2.36	2.1	0.005	0.66	0.0	0.04	18.33	0.00	2.486	10.47	1.38	3.3	96.7	0.0	0.46	1.17	0.90	0.84	2.25	24679	2877	13	129	1	0	0	logfile
✔	8RFB	19117	2025-01-13	2023-12-12	4.01	4.26	4.04	4.2	0.015	1.68	0.0	0.10	11.24	0.01	2.144	5.97	2.04	2.7	97.3	0.0	0.42	0.73	0.77	—	4.2	0.003	0.66	0.0	0.04	13.35	0.00	2.489	8.51	0.00	3.2	96.8	0.0	0.23	0.95	0.71	0.78	—	4632	597	1	0	0	0	0	logfile
✔	8XEK	38292	2025-01-17	2023-12-12	2.9	3.42	2.88	3.2	0.004	0.58	0.0	0.04	14.01	0.00	2.081	4.16	0.22	2.9	97.1	0.0	0.38	0.85	0.90	4.28	3.2	0.003	0.55	0.0	0.04	14.97	0.00	2.161	17.63	1.65	3.6	96.4	0.0	0.35	0.77	0.84	0.90	3.68	10130	1073	2	0	0	0	1840	logfile

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