Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	8V9R	43081	2025-01-25	2023-12-09	2.8	3.45	2.86	3.2	0.005	0.73	1.0	0.04	12.76	0.00	2.007	2.71	0.00	0.5	99.5	0.0	-1.66	0.83	0.81	2.76	—	—	—	—	—	—	—	—	—	—	—	—	—	0.69	—	—	—	2.43	77537	4955	28	0	11	0	38883	logfile
✘	8XCN	38248	2024-07-19	2023-12-09	3.02	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8601	1089	5	0	6	0	0	logfile
✔	8XCi	38244	2024-10-11	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.004	0.79	0.0	0.05	18.06	0.01	2.297	13.19	5.12	10.6	89.0	0.4	-2.00	0.49	0.50	0.75	1.78	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2024-09-24	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.004	0.79	0.0	0.05	18.06	0.01	2.297	13.19	5.12	10.6	89.0	0.4	-2.00	0.49	0.50	0.75	1.78	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2024-08-03	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.004	0.79	0.0	0.05	18.06	0.01	2.297	13.19	5.12	10.6	89.0	0.4	-2.00	0.49	0.50	0.75	1.78	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2024-07-19	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.003	0.74	0.0	0.04	17.94	0.00	2.153	15.30	5.86	7.3	92.3	0.4	-1.90	0.46	0.50	0.74	1.86	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2024-06-25	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.003	0.74	0.0	0.04	17.94	0.00	2.153	15.30	5.86	7.3	92.3	0.4	-1.90	0.46	0.50	0.74	1.86	8842	1143	3	0	0	0	0	logfile
✘	8XCi	38244	2025-03-13	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2025-02-13	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.003	0.74	0.0	0.04	18.00	0.01	2.379	11.82	4.48	7.1	92.4	0.4	-1.78	0.52	0.50	0.73	1.74	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2025-01-16	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.003	0.74	0.0	0.04	18.00	0.01	2.379	11.82	4.48	7.1	92.4	0.4	-1.78	0.52	0.50	0.73	1.74	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2024-12-28	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.004	0.79	0.0	0.05	18.06	0.01	2.297	13.19	5.12	10.6	89.0	0.4	-2.00	0.49	0.50	0.75	1.78	8842	1143	3	0	0	0	0	logfile
✔	8XCi	38244	2024-11-15	2023-12-09	3.57	3.94	3.60	3.9	0.017	2.34	11.0	0.11	19.30	0.01	1.529	43.22	14.39	14.1	82.6	3.3	-3.74	0.52	0.82	0.99	3.9	0.004	0.79	0.0	0.05	18.06	0.01	2.297	13.19	5.12	10.6	89.0	0.4	-2.00	0.49	0.50	0.75	1.78	8842	1143	3	0	0	0	0	logfile
✔	8XCM	38247	2025-02-13	2023-12-09	3.08	3.84	3.13	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.07	0.0	0.06	17.71	0.00	1.804	12.56	4.18	4.6	95.4	0.0	0.39	0.46	0.74	0.83	2.36	8605	1089	5	0	6	0	0	logfile
✔	8XCM	38247	2025-01-15	2023-12-09	3.08	3.84	3.13	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.07	0.0	0.06	17.71	0.00	1.804	12.56	4.18	4.6	95.4	0.0	0.39	0.46	0.74	0.83	2.36	8605	1089	5	0	6	0	0	logfile
✔	8XCM	38247	2025-03-13	2023-12-09	3.08	3.84	3.14	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.08	0.0	0.06	17.66	0.01	1.805	12.02	4.74	4.4	95.6	0.0	0.41	0.47	0.74	0.83	2.55	8605	1089	5	0	6	0	0	logfile
✔	8XCM	38247	2024-06-25	2023-12-09	3.08	3.84	3.13	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.07	0.0	0.06	17.58	0.00	1.788	14.33	3.61	4.6	95.4	0.0	0.20	0.48	0.75	0.83	2.21	8605	1089	5	0	6	0	0	logfile
✘	8XCM	38247	2024-07-19	2023-12-09	3.08	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8605	1089	5	0	6	0	0	logfile
✔	8XCM	38247	2024-08-03	2023-12-09	3.08	3.84	3.13	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.07	0.0	0.06	17.61	0.00	1.803	11.43	3.95	4.8	95.2	0.0	0.41	0.48	0.74	0.83	2.43	8605	1089	5	0	6	0	0	logfile
✔	8XCM	38247	2024-09-24	2023-12-09	3.08	3.84	3.13	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.07	0.0	0.06	17.61	0.00	1.803	11.43	3.95	4.8	95.2	0.0	0.41	0.48	0.74	0.83	2.43	8605	1089	5	0	6	0	0	logfile
✔	8XCM	38247	2024-10-10	2023-12-09	3.08	3.84	3.13	3.7	0.030	1.33	0.0	0.46	17.72	0.01	2.118	18.72	0.68	4.8	95.2	0.0	-0.04	0.75	0.83	2.38	3.7	0.004	1.07	0.0	0.06	17.61	0.00	1.803	11.43	3.95	4.8	95.2	0.0	0.41	0.48	0.74	0.83	2.43	8605	1089	5	0	6	0	0	logfile

• ← previous
• Page 336 of 5115
• next →