Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	8YA0	39087	2025-05-16	2024-02-07	2.97	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13920	1755	9	0	4	0	0	logfile
✔	8RXK	19577	2025-05-14	2024-02-07	3.23	4.03	3.38	3.6	0.005	0.77	0.0	0.04	19.42	0.00	2.093	9.71	0.25	7.1	92.2	0.7	-0.95	0.72	0.83	2.64	3.6	0.003	0.73	0.0	0.04	19.77	0.00	2.497	7.43	2.71	6.9	92.7	0.4	0.06	0.83	0.72	0.85	2.39	12162	1446	7	48	3	0	0	logfile
✔	8YA3	39090	2025-03-05	2024-02-07	3.27	3.53	3.30	3.3	0.009	0.93	0.0	0.06	15.75	0.01	2.266	7.80	0.23	7.1	92.9	0.0	-2.67	0.61	0.83	1.74	3.3	0.003	0.63	0.0	0.04	15.75	0.00	2.638	6.72	2.72	4.4	95.6	0.0	2.64	1.20	0.61	0.84	1.91	4060	519	3	0	0	0	0	logfile
✔	8YA3	39090	2025-04-27	2024-02-07	3.27	3.53	3.30	3.3	0.009	0.93	0.0	0.06	15.75	0.01	2.266	7.80	0.23	7.1	92.9	0.0	-2.67	0.61	0.83	1.74	3.3	0.003	0.63	0.0	0.04	15.75	0.00	2.638	6.72	2.72	4.4	95.6	0.0	2.64	1.20	0.61	0.84	1.91	4060	519	3	0	0	0	0	logfile
✔	8VY9	43650	2025-01-15	2024-02-07	2.88	2.27	2.92	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.005	0.61	0.0	0.04	16.62	0.00	2.418	6.78	2.10	4.9	95.1	0.0	1.00	0.48	0.79	0.82	3.27	8668	1134	6	0	2	0	0	logfile
✔	8YA3	39090	2025-05-09	2024-02-07	3.27	3.53	3.30	3.3	0.009	0.93	0.0	0.06	15.75	0.01	2.266	7.80	0.23	7.1	92.9	0.0	-2.67	0.61	0.83	1.74	3.3	0.003	0.62	0.0	0.04	15.65	0.00	2.637	6.60	2.49	5.0	95.0	0.0	2.73	1.19	0.61	0.84	1.75	4060	519	3	0	0	0	0	logfile
✔	8VY9	43650	2025-02-13	2024-02-07	2.88	2.27	2.92	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.005	0.61	0.0	0.04	16.62	0.00	2.418	6.78	2.10	4.9	95.1	0.0	1.00	0.48	0.79	0.82	3.27	8668	1134	6	0	2	0	0	logfile
✔	8VY9	43650	2024-09-24	2024-02-07	2.88	2.27	2.92	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.004	0.61	0.0	0.04	16.33	0.00	2.413	6.43	2.21	5.4	94.6	0.0	1.04	0.49	0.79	0.81	3.30	8668	1134	6	0	2	0	0	logfile
✔	8VY9	43650	2025-03-13	2024-02-07	2.88	2.27	2.91	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.005	0.64	0.0	0.04	16.43	0.00	2.394	6.31	2.32	5.0	95.0	0.0	0.88	0.48	0.79	0.82	3.31	8668	1134	6	0	2	0	0	logfile
✔	8VY9	43650	2025-04-29	2024-02-07	2.88	2.27	2.91	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.005	0.64	0.0	0.04	16.43	0.00	2.394	6.31	2.32	5.0	95.0	0.0	0.88	0.48	0.79	0.82	3.31	8668	1134	6	0	2	0	0	logfile
✔	8VY9	43650	2025-05-12	2024-02-07	2.88	2.27	2.91	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.005	0.61	0.0	0.04	16.62	0.00	2.418	6.78	2.10	4.9	95.1	0.0	1.00	0.48	0.79	0.82	3.27	8668	1134	6	0	2	0	0	logfile
✔	8VY9	43650	2024-08-03	2024-02-07	2.88	2.27	2.92	2.0	0.005	0.70	0.0	0.05	14.27	0.00	2.245	3.56	0.00	4.2	95.8	0.0	-0.69	0.78	0.80	3.74	2.1	0.004	0.61	0.0	0.04	16.33	0.00	2.413	6.43	2.21	5.4	94.6	0.0	1.04	0.49	0.79	0.81	3.30	8668	1134	6	0	2	0	0	logfile
✔	8RXK	19577	2025-01-18	2024-02-07	3.23	4.03	3.38	3.6	0.005	0.77	0.0	0.04	19.42	0.00	2.093	9.71	0.25	7.1	92.2	0.7	-0.95	0.72	0.83	2.64	3.6	0.003	0.73	0.0	0.04	19.77	0.00	2.497	7.43	2.71	6.9	92.7	0.4	0.06	0.83	0.72	0.85	2.39	12162	1446	7	48	3	0	0	logfile
✔	8RXK	19577	2024-11-16	2024-02-07	3.23	4.03	3.38	3.6	0.005	0.77	0.0	0.04	19.42	0.00	2.093	9.71	0.25	7.1	92.2	0.7	-0.95	0.72	0.83	2.64	3.6	0.003	0.74	0.0	0.04	19.67	0.00	2.454	7.14	2.13	6.6	93.0	0.4	-0.14	0.83	0.71	0.85	2.37	12162	1446	7	48	3	0	0	logfile
✔	8Y93	39068	2025-04-29	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.70	0.0	0.04	15.71	0.00	2.263	8.35	3.05	3.6	96.4	0.0	1.05	0.80	0.61	0.83	2.00	9055	1130	3	0	3	0	0	logfile
✔	8VY2	43644	2025-05-13	2024-02-06	4.3	4.36	4.28	4.3	0.010	1.03	4.0	0.06	13.16	0.02	2.212	13.22	0.97	7.6	91.9	0.5	-0.91	0.65	0.53	—	4.3	0.004	0.77	0.0	0.05	13.02	0.00	2.407	9.14	0.00	7.1	92.9	0.0	-1.06	1.57	0.78	0.74	—	10374	1319	6	0	15	0	0	logfile
✔	8Y93	39068	2024-12-28	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-11-15	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-10-11	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-09-24	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile

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