Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y92	39067	2024-12-28	2024-02-06	3.29	3.68	3.39	3.6	0.003	0.64	1.0	0.04	11.67	0.00	1.954	8.79	4.73	3.1	96.9	0.0	-1.19	0.50	0.67	2.32	3.6	0.003	0.63	0.0	0.04	15.49	0.00	2.313	10.84	3.99	3.8	96.2	0.0	1.16	0.72	0.60	0.79	2.19	9078	1130	6	0	5	5	0	logfile
✔	8Y92	39067	2024-11-15	2024-02-06	3.29	3.68	3.39	3.6	0.003	0.64	1.0	0.04	11.67	0.00	1.954	8.79	4.73	3.1	96.9	0.0	-1.19	0.50	0.67	2.32	3.6	0.003	0.63	0.0	0.04	15.49	0.00	2.313	10.84	3.99	3.8	96.2	0.0	1.16	0.72	0.60	0.79	2.19	9078	1130	6	0	5	5	0	logfile
✔	8Y92	39067	2025-04-29	2024-02-06	3.29	3.68	3.40	3.6	0.003	0.64	1.0	0.04	11.67	0.00	1.954	8.79	4.73	3.1	96.9	0.0	-1.19	0.50	0.67	2.32	3.6	0.003	0.64	0.0	0.04	15.36	0.00	2.289	11.00	4.20	3.8	96.2	0.0	1.22	0.72	0.60	0.79	1.96	9078	1130	6	0	5	5	0	logfile
✔	8Y92	39067	2025-02-13	2024-02-06	3.29	3.68	3.39	3.6	0.003	0.64	1.0	0.04	11.67	0.00	1.954	8.79	4.73	3.1	96.9	0.0	-1.19	0.50	0.67	2.32	3.6	0.003	0.63	0.0	0.04	15.40	0.00	2.308	10.62	3.89	3.7	96.3	0.0	1.31	0.72	0.60	0.79	2.03	9078	1130	6	0	5	5	0	logfile
✔	8Y92	39067	2025-01-16	2024-02-06	3.29	3.68	3.39	3.6	0.003	0.64	1.0	0.04	11.67	0.00	1.954	8.79	4.73	3.1	96.9	0.0	-1.19	0.50	0.67	2.32	3.6	0.003	0.63	0.0	0.04	15.40	0.00	2.308	10.62	3.89	3.7	96.3	0.0	1.31	0.72	0.60	0.79	2.03	9078	1130	6	0	5	5	0	logfile
✘	8Y8B	39040	2024-12-28	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✔	8Y86	39035	2024-10-10	2024-02-06	2.75	3.36	2.84	3.3	0.003	0.54	0.0	0.04	15.01	0.00	2.290	2.24	1.25	1.9	98.1	0.0	1.76	0.56	0.81	2.34	3.3	0.004	0.55	0.0	0.04	15.81	0.00	2.594	1.81	2.05	2.0	98.0	0.0	2.00	0.19	0.54	0.79	2.40	8060	1028	4	0	2	0	0	logfile
✔	8Y86	39035	2024-11-15	2024-02-06	2.75	3.36	2.84	3.3	0.003	0.54	0.0	0.04	15.01	0.00	2.290	2.24	1.25	1.9	98.1	0.0	1.76	0.56	0.81	2.34	3.3	0.004	0.55	0.0	0.04	15.81	0.00	2.594	1.81	2.05	2.0	98.0	0.0	2.00	0.19	0.54	0.79	2.40	8060	1028	4	0	2	0	0	logfile
✘	8Y8B	39040	2025-01-14	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✘	8Y8B	39040	2025-02-12	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✘	8Y8B	39040	2025-03-12	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✘	8Y8B	39040	2025-04-28	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✔	8Y87	39036	2024-08-10	2024-02-06	3.26	2.50	3.33	2.2	0.002	0.43	0.0	0.04	7.82	0.00	2.244	4.09	1.77	3.2	96.8	0.0	-2.35	0.75	0.75	3.02	2.2	0.004	0.61	0.0	0.05	12.53	0.00	2.139	5.34	2.84	4.9	95.1	0.0	-0.74	0.60	0.77	0.82	2.91	29531	3778	10	0	29	0	0	logfile
✔	8Y87	39036	2025-05-27	2024-02-06	3.26	2.50	3.33	2.2	0.002	0.43	0.0	0.04	7.82	0.00	2.244	4.09	1.77	3.2	96.8	0.0	-2.35	0.75	0.75	3.02	2.2	0.005	0.68	0.0	0.05	12.73	0.00	2.448	5.70	2.93	5.3	94.7	0.0	-0.90	1.01	0.77	0.82	2.96	29531	3778	10	0	29	0	0	logfile
✘	8Y8B	39040	2025-05-11	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✘	8Y8B	39040	2024-08-03	2024-02-06	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7303	902	14	0	26	0	0	logfile
✔	8RXC	19573	2025-05-30	2024-02-06	3.15	3.82	3.32	3.5	0.008	0.86	0.0	0.05	19.21	0.00	1.903	8.52	0.30	4.7	94.8	0.5	-1.13	0.55	0.25	2.79	3.6	0.003	0.72	0.0	0.04	19.12	0.00	1.916	8.21	2.39	4.1	95.8	0.1	0.54	1.04	0.86	0.88	2.35	19206	2376	13	42	10	0	0	logfile
✔	8Y89	39038	2025-05-28	2024-02-06	3.32	2.55	3.35	2.2	0.002	0.44	0.0	0.04	7.94	0.00	2.210	4.81	1.78	4.4	95.6	0.0	-2.29	0.73	0.73	2.36	2.2	0.006	0.75	0.0	0.05	12.15	0.00	2.374	5.94	2.69	6.4	93.6	0.0	-1.10	0.96	0.76	0.80	2.43	30645	3956	19	0	36	0	0	logfile
✔	8Y86	39035	2024-12-28	2024-02-06	2.75	3.36	2.84	3.3	0.003	0.54	0.0	0.04	15.01	0.00	2.290	2.24	1.25	1.9	98.1	0.0	1.76	0.56	0.81	2.34	3.3	0.004	0.55	0.0	0.04	15.81	0.00	2.594	1.81	2.05	2.0	98.0	0.0	2.00	0.19	0.54	0.79	2.40	8060	1028	4	0	2	0	0	logfile
✔	8Y88	39037	2024-08-11	2024-02-06	3.03	2.43	3.05	2.2	0.002	0.41	0.0	0.04	7.75	0.00	2.210	4.18	1.72	3.8	96.2	0.0	-3.28	0.75	0.76	3.28	2.1	0.003	0.72	1.0	0.05	12.54	0.00	2.292	5.04	2.68	5.5	94.5	0.0	-0.79	0.53	0.77	0.82	2.71	31257	4031	12	0	27	0	0	logfile

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