Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8V54	42979	2024-08-06	2023-11-30	4.1	2.60	3.83	1.7	0.003	0.48	0.0	0.04	13.24	0.00	2.178	9.69	0.81	4.4	95.6	0.0	0.98	0.75	0.74	—	1.9	0.003	0.61	0.0	0.04	14.47	0.00	2.504	8.23	0.13	3.4	96.6	0.0	1.16	1.09	0.73	0.72	—	15728	1787	5	46	0	0	0	logfile
✔	8V54	42979	2025-01-20	2023-11-30	4.1	2.60	3.83	1.7	0.003	0.48	0.0	0.04	13.24	0.00	2.178	9.69	0.81	4.4	95.6	0.0	0.98	0.75	0.74	—	1.9	0.003	0.59	0.0	0.04	14.37	0.00	2.475	8.10	0.13	3.5	96.5	0.0	1.28	1.08	0.73	0.72	—	15728	1787	5	46	0	0	0	logfile
✔	8R9Y	19016	2024-10-10	2023-11-30	3.0	3.63	3.03	3.5	0.003	0.59	0.0	0.04	13.51	0.00	2.255	6.05	0.00	5.1	94.9	0.0	0.13	0.84	0.83	3.66	3.5	0.004	0.65	0.0	0.05	15.59	0.00	2.489	7.00	2.63	5.1	94.9	0.0	0.13	2.03	0.86	0.85	3.57	7446	972	7	0	3	0	0	logfile
✔	8V5D	42982	2025-01-14	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.90	0.0	0.05	15.04	0.01	2.486	17.98	2.70	5.7	94.1	0.1	-0.39	2.09	0.68	0.62	0.91	6694	851	1	0	0	0	0	logfile
✔	8R8U	19011	2025-02-14	2023-11-30	3.1	3.24	3.12	3.2	0.002	0.48	0.0	0.04	16.32	0.00	1.792	4.52	0.00	2.4	97.6	0.0	0.37	0.75	0.86	3.03	3.2	0.003	0.51	0.0	0.04	16.70	0.00	2.231	3.77	2.89	2.1	97.9	0.0	0.37	1.91	0.74	0.86	2.94	10140	1280	6	0	12	0	0	logfile
✔	8R8U	19011	2025-01-17	2023-11-30	3.1	3.24	3.12	3.2	0.002	0.48	0.0	0.04	16.32	0.00	1.792	4.52	0.00	2.4	97.6	0.0	0.37	0.75	0.86	3.03	3.2	0.003	0.51	0.0	0.04	16.70	0.00	2.231	3.77	2.89	2.1	97.9	0.0	0.37	1.91	0.74	0.86	2.94	10140	1280	6	0	12	0	0	logfile
✔	8R9V	19013	2024-12-31	2023-11-30	4.4	2.81	4.31	3.9	0.013	1.69	1.0	0.10	14.89	0.01	1.324	17.12	0.25	4.3	95.3	0.3	-2.00	0.64	0.65	—	1.8	0.003	0.79	0.0	0.04	14.16	0.00	1.865	12.30	0.06	3.8	96.2	0.0	0.11	1.94	0.68	0.72	—	14851	1857	8	0	10	0	0	logfile
✔	8R9V	19013	2025-01-20	2023-11-30	4.4	2.81	4.31	3.9	0.013	1.69	1.0	0.10	14.89	0.01	1.324	17.12	0.25	4.3	95.3	0.3	-2.00	0.64	0.65	—	1.8	0.003	0.81	0.0	0.05	14.11	0.00	1.852	12.71	0.00	3.2	96.7	0.1	-0.01	1.24	0.68	0.72	—	14851	1857	8	0	10	0	0	logfile
✔	8R8U	19011	2024-12-29	2023-11-30	3.1	3.24	3.12	3.2	0.002	0.48	0.0	0.04	16.32	0.00	1.792	4.52	0.00	2.4	97.6	0.0	0.37	0.75	0.86	3.03	3.2	0.003	0.51	0.0	0.04	16.71	0.00	2.232	3.57	3.06	2.0	98.0	0.0	0.49	1.91	0.74	0.86	2.92	10140	1280	6	0	12	0	0	logfile
✔	8V5D	42982	2025-02-11	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.90	0.0	0.05	15.04	0.01	2.486	17.98	2.70	5.7	94.1	0.1	-0.39	2.09	0.68	0.62	0.91	6694	851	1	0	0	0	0	logfile
✔	8V5D	42982	2025-03-11	2023-11-30	3.0	3.76	3.04	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.91	0.0	0.05	14.86	0.01	2.436	17.76	2.98	5.3	94.5	0.2	-0.25	2.09	0.69	0.62	0.90	6694	851	1	0	0	0	0	logfile
✔	8V5D	42982	2024-08-03	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.88	0.0	0.05	14.86	0.01	2.451	17.08	1.84	5.5	94.4	0.1	-0.14	1.24	0.68	0.62	0.80	6694	851	1	0	0	0	0	logfile
✔	8V5D	42982	2024-12-27	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.88	0.0	0.05	14.86	0.01	2.451	17.08	1.84	5.5	94.4	0.1	-0.14	1.24	0.68	0.62	0.80	6694	851	1	0	0	0	0	logfile
✔	8V5D	42982	2024-11-14	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.88	0.0	0.05	14.86	0.01	2.451	17.08	1.84	5.5	94.4	0.1	-0.14	1.24	0.68	0.62	0.80	6694	851	1	0	0	0	0	logfile
✔	8V5D	42982	2024-09-24	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.88	0.0	0.05	14.86	0.01	2.451	17.08	1.84	5.5	94.4	0.1	-0.14	1.24	0.68	0.62	0.80	6694	851	1	0	0	0	0	logfile
✔	8V5D	42982	2024-10-10	2023-11-30	3.0	3.76	3.05	3.6	0.003	0.52	0.0	0.04	9.90	0.00	2.219	12.09	1.84	4.1	95.9	0.0	0.80	0.69	0.61	1.04	3.6	0.004	0.88	0.0	0.05	14.86	0.01	2.451	17.08	1.84	5.5	94.4	0.1	-0.14	1.24	0.68	0.62	0.80	6694	851	1	0	0	0	0	logfile
✔	8R9X	19015	2024-06-24	2023-11-30	3.1	3.71	3.14	3.5	0.004	0.65	0.0	0.04	16.48	0.00	2.277	5.12	0.00	4.4	95.6	0.0	-0.47	0.72	0.88	3.81	3.5	0.003	0.63	0.0	0.04	14.72	0.00	2.277	7.41	2.24	4.0	96.0	0.0	-0.06	0.52	0.64	0.85	3.87	3782	461	8	0	15	0	0	logfile
✔	8R9X	19015	2024-07-18	2023-11-30	3.1	3.71	3.14	3.5	0.004	0.65	0.0	0.04	16.48	0.00	2.277	5.12	0.00	4.4	95.6	0.0	-0.47	0.72	0.88	3.81	3.5	0.003	0.63	0.0	0.04	14.72	0.00	2.277	7.41	2.24	4.0	96.0	0.0	-0.06	0.52	0.64	0.85	3.87	3782	461	8	0	15	0	0	logfile
✔	8V5A	42981	2024-07-21	2023-11-30	3.0	2.17	3.05	2.0	0.009	1.05	0.0	0.06	13.03	0.01	2.106	6.89	0.00	3.7	96.3	0.0	-0.64	0.78	0.74	3.21	2.0	0.004	0.68	0.0	0.04	16.02	0.00	2.231	9.55	1.77	2.1	97.9	0.0	0.19	0.95	0.78	0.80	2.53	13056	1701	6	0	0	0	0	logfile
✔	8R9X	19015	2024-08-02	2023-11-30	3.1	3.71	3.14	3.5	0.004	0.65	0.0	0.04	16.48	0.00	2.277	5.12	0.00	4.4	95.6	0.0	-0.47	0.72	0.88	3.81	3.5	0.003	0.66	0.0	0.04	14.63	0.00	2.481	5.12	1.75	3.7	96.3	0.0	0.06	0.54	0.65	0.86	3.87	3782	461	8	0	15	0	0	logfile

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