Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9B63	44244	2025-02-14	2024-03-23	2.76	2.46	2.75	2.8	0.002	0.47	0.0	0.03	17.29	0.00	2.238	5.01	2.22	3.5	96.5	0.0	3.41	0.55	0.78	2.99	2.8	0.003	0.48	0.0	0.04	17.18	0.00	2.574	5.63	3.05	3.3	96.7	0.0	3.88	0.29	0.53	0.79	2.99	10461	1348	8	0	0	0	0	logfile
✔	9B61	44234	2025-06-16	2024-03-23	2.81	3.15	2.76	3.1	0.005	0.80	0.0	0.04	17.30	0.00	2.154	11.12	3.10	2.7	97.3	0.0	1.40	0.63	0.78	1.89	3.1	0.003	0.69	0.0	0.04	17.25	0.00	2.480	9.54	3.52	2.8	97.2	0.0	1.56	0.40	0.64	0.82	2.10	18447	2384	8	0	0	0	0	logfile
✔	9B61	44234	2025-05-19	2024-03-23	2.81	3.15	2.76	3.1	0.005	0.80	0.0	0.04	17.30	0.00	2.154	11.12	3.10	2.7	97.3	0.0	1.40	0.63	0.78	1.89	3.1	0.004	0.70	0.0	0.04	17.28	0.00	2.459	9.70	2.33	2.7	97.3	0.0	1.47	0.41	0.64	0.82	2.04	18447	2384	8	0	0	0	0	logfile
✔	9B61	44234	2024-11-19	2024-03-23	2.81	3.15	2.76	3.1	0.005	0.80	0.0	0.04	17.30	0.00	2.154	11.12	3.10	2.7	97.3	0.0	1.40	0.63	0.78	1.89	3.1	0.003	0.69	0.0	0.04	17.27	0.00	2.502	9.67	2.33	2.5	97.5	0.0	1.61	0.40	0.65	0.82	1.88	18447	2384	8	0	0	0	0	logfile
✔	9B6A	44251	2025-01-22	2024-03-23	3.35	2.74	3.31	3.1	0.003	0.50	0.0	0.04	16.79	0.00	2.196	7.53	0.26	2.1	97.9	0.0	2.10	0.57	0.79	2.33	3.1	0.002	0.49	0.0	0.04	16.99	0.00	2.448	7.23	2.16	2.4	97.6	0.0	2.43	0.32	0.57	0.79	2.39	18493	2378	8	0	0	0	0	logfile
✔	9B63	44244	2025-01-17	2024-03-23	2.76	2.46	2.75	2.8	0.002	0.47	0.0	0.03	17.29	0.00	2.238	5.01	2.22	3.5	96.5	0.0	3.41	0.55	0.78	2.99	2.8	0.003	0.48	0.0	0.04	17.18	0.00	2.574	5.63	3.05	3.3	96.7	0.0	3.88	0.29	0.53	0.79	2.99	10461	1348	8	0	0	0	0	logfile
✔	9B61	44234	2025-01-22	2024-03-23	2.81	3.15	2.76	3.1	0.005	0.80	0.0	0.04	17.30	0.00	2.154	11.12	3.10	2.7	97.3	0.0	1.40	0.63	0.78	1.89	3.1	0.003	0.69	0.0	0.04	17.25	0.00	2.504	9.78	2.33	2.5	97.5	0.0	1.60	0.41	0.64	0.82	1.96	18447	2384	8	0	0	0	0	logfile
✔	9B61	44234	2024-10-14	2024-03-23	2.81	3.15	2.76	3.1	0.005	0.80	0.0	0.04	17.30	0.00	2.154	11.12	3.10	2.7	97.3	0.0	1.40	0.63	0.78	1.89	3.1	0.003	0.69	0.0	0.04	17.27	0.00	2.502	9.67	2.33	2.5	97.5	0.0	1.61	0.40	0.65	0.82	1.88	18447	2384	8	0	0	0	0	logfile
✔	9B6A	44251	2024-11-19	2024-03-23	3.35	2.74	3.31	3.1	0.003	0.50	0.0	0.04	16.79	0.00	2.196	7.53	0.26	2.1	97.9	0.0	2.10	0.57	0.79	2.33	3.1	0.002	0.49	0.0	0.04	16.93	0.00	2.499	7.40	2.16	2.4	97.6	0.0	2.29	0.35	0.59	0.81	2.41	18493	2378	8	0	0	0	0	logfile
✘	9B6A	44251	2024-10-14	2024-03-23	3.35	2.74	3.31	3.1	0.003	0.50	0.0	0.04	16.79	0.00	2.196	7.53	0.26	2.1	97.9	0.0	2.10	0.57	0.79	2.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18493	2378	8	0	0	0	0	logfile
✔	9B6A	44251	2025-06-16	2024-03-23	3.35	2.74	3.30	3.1	0.003	0.50	0.0	0.04	16.79	0.00	2.196	7.53	0.26	2.1	97.9	0.0	2.10	0.57	0.79	2.33	3.1	0.003	0.54	0.0	0.04	17.03	0.00	2.494	7.99	2.98	3.0	97.0	0.0	2.05	0.34	0.59	0.82	2.29	18493	2378	8	0	0	0	0	logfile
✔	9ERi	19915	2025-06-11	2024-03-23	3.3	3.76	3.38	3.7	0.011	1.52	0.0	0.05	15.83	0.01	2.216	4.67	1.86	5.4	94.0	0.5	-0.60	0.67	0.77	1.68	3.7	0.003	1.16	0.0	0.04	15.99	0.00	1.412	5.83	2.45	6.3	93.4	0.3	0.59	0.30	0.61	0.78	1.59	12704	1688	11	0	16	0	0	logfile
✔	9ERi	19915	2025-07-30	2024-03-23	3.3	3.76	3.38	3.7	0.011	1.52	0.0	0.05	15.83	0.01	2.216	4.67	1.86	5.4	94.0	0.5	-0.60	0.67	0.77	1.68	3.7	0.003	1.16	0.0	0.04	15.99	0.00	1.412	5.83	2.45	6.3	93.4	0.3	0.59	0.30	0.61	0.78	1.59	12704	1688	11	0	16	0	0	logfile
✔	9ERK	19919	2025-05-15	2024-03-23	2.8	3.50	2.88	3.3	0.004	1.13	0.0	0.05	16.19	0.01	2.289	2.77	2.82	7.0	92.4	0.5	-0.70	0.81	0.87	2.78	3.3	0.003	0.97	0.0	0.04	16.22	0.00	2.282	3.78	1.63	6.6	93.1	0.2	0.50	1.57	0.69	0.82	2.76	12667	1688	12	0	22	0	0	logfile
✔	9ERK	19919	2025-06-11	2024-03-23	2.8	3.50	2.88	3.3	0.004	1.13	0.0	0.05	16.19	0.01	2.289	2.77	2.82	7.0	92.4	0.5	-0.70	0.81	0.87	2.78	3.3	0.003	1.01	0.0	0.04	16.27	0.00	2.276	3.94	2.08	6.9	92.9	0.2	0.42	1.57	0.69	0.83	2.75	12667	1688	12	0	22	0	0	logfile
✔	9ERL	19920	2025-06-11	2024-03-23	3.0	3.76	3.15	3.6	0.004	1.13	0.0	0.05	16.24	0.01	2.271	2.88	1.41	6.9	92.6	0.5	-0.77	0.78	0.80	2.08	3.6	0.008	1.05	0.0	0.04	16.33	0.00	2.313	4.21	2.38	6.6	93.0	0.4	0.69	0.49	0.70	0.82	2.14	12663	1688	12	0	18	0	0	logfile
✔	9ERL	19920	2025-07-30	2024-03-23	3.0	3.76	3.15	3.6	0.004	1.13	0.0	0.05	16.24	0.01	2.271	2.88	1.41	6.9	92.6	0.5	-0.77	0.78	0.80	2.08	3.6	0.008	1.05	0.0	0.04	16.33	0.00	2.313	4.21	2.38	6.6	93.0	0.4	0.69	0.49	0.70	0.82	2.14	12663	1688	12	0	18	0	0	logfile
✔	9ERL	19920	2025-05-15	2024-03-23	3.0	3.76	3.15	3.6	0.004	1.13	0.0	0.05	16.24	0.01	2.271	2.88	1.41	6.9	92.6	0.5	-0.77	0.78	0.80	2.08	3.6	0.006	1.09	0.0	0.05	16.40	0.01	2.310	4.40	2.08	7.5	92.1	0.4	0.46	0.50	0.71	0.83	2.18	12663	1688	12	0	18	0	0	logfile
✔	9ERK	19919	2025-07-30	2024-03-23	2.8	3.50	2.88	3.3	0.004	1.13	0.0	0.05	16.19	0.01	2.289	2.77	2.82	7.0	92.4	0.5	-0.70	0.81	0.87	2.78	3.3	0.003	1.01	0.0	0.04	16.27	0.00	2.276	3.94	2.08	6.9	92.9	0.2	0.42	1.57	0.69	0.83	2.75	12667	1688	12	0	22	0	0	logfile
✔	9ERi	19915	2025-05-15	2024-03-23	3.3	3.76	3.38	3.7	0.011	1.52	0.0	0.05	15.83	0.01	2.216	4.67	1.86	5.4	94.0	0.5	-0.60	0.67	0.77	1.68	3.7	0.003	1.16	0.0	0.04	15.97	0.00	1.379	5.99	3.12	6.2	93.5	0.3	0.48	0.30	0.62	0.78	1.61	12704	1688	11	0	16	0	0	logfile

• ← previous
• Page 389 of 5055
• next →