Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Yi7	39311	2025-06-05	2024-02-29	3.57	3.79	3.53	3.8	0.013	1.64	4.0	0.11	13.65	0.00	2.122	9.97	1.75	4.2	95.8	0.0	0.53	0.67	0.77	2.41	3.8	0.003	0.64	0.0	0.04	14.86	0.00	2.491	6.16	2.23	2.6	97.4	0.0	0.47	1.19	0.71	0.84	1.97	5586	697	6	0	4	0	0	logfile
✔	9AUi	43881	2025-06-17	2024-02-29	3.8	4.05	3.82	4.0	0.006	1.10	0.0	0.06	18.39	0.01	2.242	4.31	0.00	8.7	91.3	0.0	-2.58	0.74	0.82	1.75	4.0	0.003	0.73	0.0	0.05	15.96	0.00	2.378	7.77	2.03	7.4	92.6	0.0	-1.38	0.38	0.75	0.83	1.42	20184	2457	30	0	87	0	0	logfile
✔	9AUi	43881	2025-05-20	2024-02-29	3.8	4.05	3.82	4.0	0.006	1.10	0.0	0.06	18.39	0.01	2.242	4.31	0.00	8.7	91.3	0.0	-2.58	0.74	0.82	1.75	4.0	0.003	0.74	0.0	0.05	15.84	0.00	2.380	7.44	2.32	7.7	92.3	0.0	-1.36	0.38	0.75	0.83	1.43	20184	2457	30	0	87	0	0	logfile
✔	8YHU	39301	2025-05-10	2024-02-28	2.88	2.30	2.91	2.1	0.004	0.74	0.0	0.05	15.50	0.00	2.248	11.29	0.30	13.0	86.8	0.1	-3.42	0.69	0.66	2.73	2.1	0.003	0.67	0.0	0.05	15.59	0.00	2.524	7.69	2.70	11.2	88.8	0.0	-3.13	0.34	0.71	0.69	2.04	5990	719	8	0	15	0	0	logfile
✔	8YHT	39300	2025-02-11	2024-02-28	2.88	4.04	3.07	3.7	0.004	0.70	0.0	0.05	15.46	0.00	1.995	11.47	0.46	12.1	87.8	0.1	-3.01	0.76	0.63	1.79	3.8	0.003	0.87	0.0	0.06	16.30	0.00	2.415	11.30	2.76	10.5	89.5	0.0	-2.91	1.14	0.77	0.68	2.26	5845	703	7	0	14	0	0	logfile
✔	8YHU	39301	2025-06-05	2024-02-28	2.88	2.30	2.91	2.1	0.004	0.74	0.0	0.05	15.50	0.00	2.248	11.29	0.30	13.0	86.8	0.1	-3.42	0.69	0.66	2.73	2.1	0.005	0.78	0.0	0.05	15.55	0.00	2.437	9.87	2.55	12.5	87.5	0.0	-3.42	0.35	0.71	0.69	1.88	5990	719	8	0	15	0	0	logfile
✔	8YHU	39301	2025-04-27	2024-02-28	2.88	2.30	2.91	2.1	0.004	0.74	0.0	0.05	15.50	0.00	2.248	11.29	0.30	13.0	86.8	0.1	-3.42	0.69	0.66	2.73	2.1	0.005	0.78	0.0	0.05	15.55	0.00	2.437	9.87	2.55	12.5	87.5	0.0	-3.42	0.35	0.71	0.69	1.88	5990	719	8	0	15	0	0	logfile
✔	8YHU	39301	2025-02-11	2024-02-28	2.88	2.30	2.92	2.1	0.004	0.72	0.0	0.05	15.50	0.00	2.248	11.29	0.30	13.0	86.8	0.1	-3.42	0.69	0.66	2.73	2.1	0.003	0.69	0.0	0.05	15.70	0.00	2.500	9.37	2.40	12.3	87.7	0.0	-3.36	0.34	0.71	0.69	1.83	5990	719	8	0	15	0	0	logfile
✔	8YHE	39288	2025-05-21	2024-02-28	3.07	3.30	3.14	3.3	0.009	1.19	1.0	0.06	18.57	0.01	2.133	9.90	2.27	5.0	94.9	0.0	-2.65	0.69	0.81	2.09	3.3	0.006	0.62	0.0	0.04	18.58	0.00	2.150	8.80	3.16	3.1	96.8	0.0	0.28	0.45	0.69	0.82	2.28	21183	2561	22	76	9	0	0	logfile
✔	8YHE	39288	2025-06-18	2024-02-28	3.07	3.30	3.14	3.3	0.009	1.19	1.0	0.06	18.57	0.01	2.133	9.90	2.27	5.0	94.9	0.0	-2.65	0.69	0.81	2.09	3.3	0.007	0.78	1.0	0.04	18.64	0.00	1.831	10.02	3.41	3.2	96.8	0.0	0.21	0.45	0.70	0.82	2.47	21183	2561	22	76	9	0	0	logfile
✔	8YHE	39288	2024-09-29	2024-02-28	3.07	3.30	3.14	3.3	0.008	1.12	1.0	0.06	18.57	0.01	2.133	9.90	2.27	5.0	94.9	0.0	-2.65	0.69	0.81	2.09	3.3	0.003	0.75	1.0	0.04	18.65	0.00	2.153	10.07	4.34	3.4	96.6	0.0	0.05	1.06	0.68	0.80	2.61	21183	2561	22	76	9	0	0	logfile
✔	8YHE	39288	2024-11-20	2024-02-28	3.07	3.30	3.14	3.3	0.008	1.12	1.0	0.06	18.57	0.01	2.133	9.90	2.27	5.0	94.9	0.0	-2.65	0.69	0.81	2.09	3.3	0.003	0.75	1.0	0.04	18.65	0.00	2.153	10.07	4.34	3.4	96.6	0.0	0.05	1.06	0.68	0.80	2.61	21183	2561	22	76	9	0	0	logfile
✔	9AU7	43872	2024-11-18	2024-02-28	3.4	2.42	—	3.3	0.004	0.66	0.0	0.04	14.95	0.01	2.224	13.06	0.21	4.4	95.6	0.0	0.16	0.61	0.54	0.16	2.0	0.004	0.62	0.0	0.04	16.28	0.00	2.291	12.60	0.93	4.8	95.2	0.0	0.44	1.32	0.67	0.64	1.77	17304	1079	4	0	0	0	8703	logfile
✔	8YHo	39290	2025-01-14	2024-02-28	2.8	3.60	2.93	3.4	0.018	1.52	4.0	0.08	12.89	0.01	2.200	13.51	1.83	8.2	91.3	0.5	-4.81	0.77	0.81	3.05	3.4	0.004	0.83	0.0	0.04	15.18	0.00	2.490	11.58	2.12	7.1	92.9	0.0	-0.35	1.34	0.75	0.79	2.10	6206	759	3	0	0	0	0	logfile
✔	8YHo	39290	2025-02-11	2024-02-28	2.8	3.60	2.93	3.4	0.018	1.52	4.0	0.08	12.89	0.01	2.200	13.51	1.83	8.2	91.3	0.5	-4.81	0.77	0.81	3.05	3.4	0.004	0.83	0.0	0.04	15.18	0.00	2.490	11.58	2.12	7.1	92.9	0.0	-0.35	1.34	0.75	0.79	2.10	6206	759	3	0	0	0	0	logfile
✔	9AU2	43842	2025-01-25	2024-02-28	3.1	3.34	3.11	3.3	0.005	0.63	2.0	0.05	9.79	0.01	2.030	3.71	1.16	3.0	96.9	0.1	-0.91	0.63	0.73	5.07	3.3	0.002	0.51	0.0	0.04	12.10	0.00	2.428	2.57	2.27	1.9	98.1	0.0	0.43	0.36	0.78	0.86	3.88	23745	3419	20	0	49	0	0	logfile
✔	9AU2	43842	2025-06-20	2024-02-28	3.1	3.34	3.11	3.3	0.005	0.64	2.0	0.05	9.79	0.01	2.030	3.71	1.16	3.0	96.9	0.1	-0.91	0.63	0.73	5.07	3.3	0.002	0.51	0.0	0.04	12.01	0.00	2.430	2.45	1.61	1.9	98.1	0.0	0.57	0.37	0.77	0.85	3.84	23745	3419	20	0	49	0	0	logfile
✔	8YHo	39290	2025-03-11	2024-02-28	2.8	3.60	2.94	3.4	0.018	1.52	4.0	0.08	12.89	0.01	2.200	13.51	1.83	8.2	91.3	0.5	-4.81	0.77	0.81	3.05	3.4	0.004	0.85	0.0	0.04	15.06	0.00	2.552	11.74	1.97	7.1	92.9	0.0	-0.42	1.34	0.76	0.79	2.28	6206	759	3	0	0	0	0	logfile
✔	8YHo	39290	2025-04-27	2024-02-28	2.8	3.60	2.94	3.4	0.018	1.52	4.0	0.08	12.89	0.01	2.200	13.51	1.83	8.2	91.3	0.5	-4.81	0.77	0.81	3.05	3.4	0.004	0.85	0.0	0.04	15.06	0.00	2.552	11.74	1.97	7.1	92.9	0.0	-0.42	1.34	0.76	0.79	2.28	6206	759	3	0	0	0	0	logfile
✔	9AU2	43842	2025-05-23	2024-02-28	3.1	3.34	3.11	3.3	0.005	0.64	2.0	0.05	9.79	0.01	2.030	3.71	1.16	3.0	96.9	0.1	-0.91	0.63	0.73	5.07	3.3	0.003	0.53	0.0	0.04	12.02	0.00	2.430	2.48	2.05	2.2	97.8	0.0	0.56	0.36	0.78	0.85	3.90	23745	3419	20	0	49	0	0	logfile

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