Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YH5	39281	2024-11-15	2024-02-27	3.66	4.08	—	3.8	0.004	0.72	0.0	0.04	13.33	0.02	2.102	11.23	0.10	6.5	93.5	0.0	-1.50	0.62	0.62	0.60	3.8	0.003	0.85	0.0	0.05	16.47	0.00	2.347	13.71	2.94	4.7	95.2	0.1	-0.25	1.15	0.64	0.67	0.35	8695	1103	6	0	1	0	0	logfile
✔	8YHA	39286	2025-05-26	2024-02-27	3.4	3.38	3.35	3.3	0.003	0.62	0.0	0.04	20.62	0.00	1.865	6.67	0.54	6.1	93.9	0.0	-0.99	0.82	0.84	2.19	3.3	0.006	0.66	0.0	0.04	20.57	0.00	2.387	7.36	3.53	8.0	92.0	0.0	-0.50	0.28	0.83	0.86	2.46	28503	3333	14	108	2	0	0	logfile
✔	8YHA	39286	2025-06-24	2024-02-27	3.4	3.38	3.35	3.3	0.003	0.62	0.0	0.04	20.62	0.00	1.865	6.67	0.54	6.1	93.9	0.0	-0.99	0.82	0.84	2.19	3.3	0.007	0.71	0.0	0.05	20.59	0.00	2.385	7.27	4.32	8.6	91.4	0.0	-0.69	0.30	0.83	0.87	2.44	28503	3333	14	108	2	0	0	logfile
✔	9ATo	43831	2025-06-24	2024-02-27	3.2	3.77	3.23	3.6	0.004	0.68	0.0	0.05	15.57	0.00	2.186	8.33	0.36	2.9	97.1	0.1	0.48	0.83	0.84	2.22	3.6	0.004	0.61	0.0	0.04	15.57	0.00	2.497	5.92	2.21	3.0	96.9	0.1	0.54	0.40	0.85	0.90	2.29	27725	3478	24	0	40	0	0	logfile
✔	9ATo	43831	2025-05-27	2024-02-27	3.2	3.77	3.23	3.6	0.004	0.68	0.0	0.05	15.57	0.00	2.186	8.33	0.36	2.9	97.1	0.1	0.48	0.83	0.84	2.22	3.6	0.003	0.58	0.0	0.04	15.51	0.00	2.502	5.64	2.14	2.8	97.1	0.1	0.69	0.38	0.84	0.89	2.24	27725	3478	24	0	40	0	0	logfile
✔	9ATW	43835	2025-01-24	2024-02-27	3.5	3.26	3.56	4.2	0.012	2.18	0.0	0.13	15.03	0.01	2.675	7.20	0.00	5.3	94.7	0.0	-3.62	0.74	0.74	3.46	4.2	0.004	0.69	0.0	0.06	15.24	0.00	2.397	25.78	8.00	3.6	96.4	0.0	-3.47	1.35	0.73	0.78	1.83	21952	1344	64	0	0	0	11840	logfile
✔	9ATW	43835	2024-09-29	2024-02-27	3.5	3.26	3.56	4.2	0.012	2.18	0.0	0.13	15.03	0.01	2.675	7.20	0.00	5.3	94.7	0.0	-3.62	0.74	0.74	3.46	4.2	0.003	0.68	0.0	0.06	15.13	0.00	2.420	25.83	7.81	5.0	95.0	0.0	-3.39	1.49	0.73	0.77	1.83	21952	1344	64	0	0	0	11840	logfile
✔	9ATW	43835	2025-06-18	2024-02-27	3.5	3.26	3.55	4.2	0.012	2.18	0.0	0.13	15.03	0.01	2.675	7.20	0.00	5.3	94.7	0.0	-3.62	0.74	0.74	3.46	4.2	0.004	0.68	0.0	0.06	15.18	0.00	2.407	27.42	8.18	5.0	95.0	0.0	-3.41	1.36	0.75	0.78	1.83	21952	1344	64	0	0	0	11840	logfile
✔	9ATW	43835	2025-05-21	2024-02-27	3.5	3.26	3.55	4.2	0.012	2.18	0.0	0.13	15.03	0.01	2.675	7.20	0.00	5.3	94.7	0.0	-3.62	0.74	0.74	3.46	4.2	0.004	0.69	0.0	0.06	15.24	0.00	2.397	25.78	8.00	3.6	96.4	0.0	-3.47	1.35	0.73	0.78	1.83	21952	1344	64	0	0	0	11840	logfile
✔	9ATZ	43838	2025-06-18	2024-02-27	3.4	3.47	3.20	3.4	0.008	1.06	0.0	0.05	11.74	0.01	1.872	4.38	0.13	3.4	96.6	0.0	-0.67	0.72	0.83	3.42	3.4	0.006	0.77	0.0	0.05	13.40	0.00	2.450	5.87	2.33	4.0	96.0	0.0	-0.50	0.63	0.74	0.86	2.71	21190	1676	38	0	1440	0	0	logfile
✔	9ATZ	43838	2025-05-21	2024-02-27	3.4	3.47	3.20	3.4	0.008	1.06	0.0	0.05	11.74	0.01	1.872	4.38	0.13	3.4	96.6	0.0	-0.67	0.72	0.83	3.42	3.4	0.004	0.71	0.0	0.04	13.39	0.00	2.448	5.60	1.87	3.2	96.7	0.1	-0.61	0.63	0.74	0.86	2.64	21190	1676	38	0	1440	0	0	logfile
✔	8YH8	39284	2025-06-21	2024-02-27	2.7	3.19	2.81	3.0	0.009	1.31	21.0	0.08	16.53	0.01	0.393	12.19	3.63	4.0	94.7	1.3	-0.33	0.83	0.84	2.47	3.0	0.003	0.66	0.0	0.04	16.49	0.00	1.148	4.79	1.57	3.0	96.9	0.1	1.14	1.20	0.83	0.92	3.39	24712	3205	11	0	6	0	0	logfile
✔	8YGU	39264	2025-04-26	2024-02-27	3.13	2.22	3.06	2.0	0.006	0.92	0.0	0.06	8.81	0.01	2.179	1.51	0.00	5.9	94.1	0.0	-3.27	0.58	0.78	4.48	2.1	0.003	0.61	0.0	0.04	13.46	0.00	2.409	3.03	3.42	5.7	94.3	0.0	-0.97	1.25	0.60	0.81	3.97	3693	474	5	0	0	0	0	logfile
✔	8YGU	39264	2025-03-05	2024-02-27	3.13	2.22	3.06	2.0	0.006	0.92	0.0	0.06	8.81	0.01	2.179	1.51	0.00	5.9	94.1	0.0	-3.27	0.58	0.78	4.48	2.1	0.004	0.65	0.0	0.04	13.55	0.00	2.419	3.30	4.16	6.3	93.7	0.0	-0.96	1.25	0.60	0.81	3.97	3693	474	5	0	0	0	0	logfile
✔	9ATP	43832	2025-05-16	2024-02-27	3.5	4.08	3.59	3.8	0.005	0.73	0.0	0.05	15.18	0.01	2.043	15.12	0.21	6.2	93.5	0.3	-1.38	0.75	0.76	2.34	3.8	0.004	0.64	0.0	0.05	15.55	0.00	2.366	9.92	2.71	5.8	94.0	0.2	-0.93	0.57	0.75	0.79	2.09	13004	1636	6	0	0	0	0	logfile
✘	9ATP	43832	2024-12-30	2024-02-27	3.5	4.08	3.59	3.8	0.005	0.73	0.0	0.05	15.18	0.01	2.043	15.12	0.21	6.2	93.5	0.3	-1.38	0.75	0.76	2.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13004	1636	6	0	0	0	0	logfile
✘	9ATP	43832	2024-11-17	2024-02-27	3.5	4.08	3.59	3.8	0.005	0.73	0.0	0.05	15.18	0.01	2.043	15.12	0.21	6.2	93.5	0.3	-1.38	0.75	0.76	2.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13004	1636	6	0	0	0	0	logfile
✘	9ATP	43832	2024-10-13	2024-02-27	3.5	4.08	3.59	3.8	0.005	0.73	0.0	0.05	15.18	0.01	2.043	15.12	0.21	6.2	93.5	0.3	-1.38	0.75	0.76	2.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13004	1636	6	0	0	0	0	logfile
✘	9ATP	43832	2024-09-26	2024-02-27	3.5	4.08	3.59	3.8	0.005	0.73	0.0	0.05	15.18	0.01	2.043	15.12	0.21	6.2	93.5	0.3	-1.38	0.75	0.76	2.34	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13004	1636	6	0	0	0	0	logfile
✔	9ATP	43832	2025-06-12	2024-02-27	3.5	4.08	3.59	3.8	0.005	0.73	0.0	0.05	15.18	0.01	2.043	15.12	0.21	6.2	93.5	0.3	-1.38	0.75	0.76	2.34	3.8	0.003	0.62	0.0	0.04	15.52	0.00	2.342	8.67	2.30	5.2	94.6	0.2	-0.78	0.59	0.75	0.79	1.94	13004	1636	6	0	0	0	0	logfile

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