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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8X16 | 37985 | 2025-01-15 | 2023-11-06 | 3.29 | 3.58 | 3.36 | 3.7 | 0.005 | 0.53 | 0.0 | 0.04 | 8.10 | 0.00 | 2.203 | 8.34 | 0.32 | 2.0 | 97.9 | 0.1 | -1.18 | 0.56 | 0.60 | 1.26 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 14.73 | 0.00 | 2.501 | 10.35 | 2.99 | 3.4 | 96.6 | 0.0 | 0.57 | 1.16 | 0.63 | 0.79 | 1.57 | 8751 | 1126 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8R2i | 18848 | 2024-09-28 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.91 | 0.0 | 0.04 | 16.39 | 0.00 | 2.001 | 8.96 | 1.22 | 3.0 | 97.0 | 0.0 | 1.72 | 0.35 | 0.73 | 0.89 | 3.07 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2i | 18848 | 2025-01-23 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.88 | 0.0 | 0.04 | 16.14 | 0.00 | 2.030 | 9.07 | 0.90 | 3.2 | 96.8 | 0.0 | 1.85 | 0.34 | 0.72 | 0.88 | 3.02 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2i | 18848 | 2024-02-17 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.63 | 0.0 | 0.09 | 20.78 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.89 | 0.0 | 0.04 | 15.87 | 0.00 | 1.689 | 9.73 | 1.03 | 2.9 | 97.1 | 0.0 | 1.61 | 0.36 | 0.73 | 0.89 | 3.18 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2i | 18848 | 2024-06-29 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.88 | 0.0 | 0.04 | 16.33 | 0.00 | 1.983 | 9.82 | 1.16 | 2.8 | 97.2 | 0.0 | 1.89 | 0.36 | 0.73 | 0.89 | 3.28 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2i | 18848 | 2024-08-07 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.91 | 0.0 | 0.04 | 16.39 | 0.00 | 2.001 | 8.96 | 1.22 | 3.0 | 97.0 | 0.0 | 1.72 | 0.35 | 0.73 | 0.89 | 3.07 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✘ | 8R2i | 18848 | 2024-07-23 | 2023-11-06 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2i | 18848 | 2024-11-20 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.91 | 0.0 | 0.04 | 16.39 | 0.00 | 2.001 | 8.96 | 1.22 | 3.0 | 97.0 | 0.0 | 1.72 | 0.35 | 0.73 | 0.89 | 3.07 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8X17 | 37986 | 2024-10-10 | 2023-11-06 | 3.19 | 3.42 | 3.20 | 3.4 | 0.005 | 0.56 | 0.0 | 0.04 | 12.62 | 0.00 | 2.053 | 3.79 | 0.32 | 1.6 | 98.4 | 0.0 | -0.96 | 0.62 | 0.78 | 2.23 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.35 | 0.00 | 2.405 | 6.15 | 1.92 | 3.1 | 96.9 | 0.0 | 0.90 | 1.06 | 0.62 | 0.85 | 2.39 | 8753 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8X17 | 37986 | 2024-12-28 | 2023-11-06 | 3.19 | 3.42 | 3.20 | 3.4 | 0.005 | 0.56 | 0.0 | 0.04 | 12.62 | 0.00 | 2.053 | 3.79 | 0.32 | 1.6 | 98.4 | 0.0 | -0.96 | 0.62 | 0.78 | 2.23 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.35 | 0.00 | 2.405 | 6.15 | 1.92 | 3.1 | 96.9 | 0.0 | 0.90 | 1.06 | 0.62 | 0.85 | 2.39 | 8753 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8X17 | 37986 | 2024-08-03 | 2023-11-06 | 3.19 | 3.42 | 3.20 | 3.4 | 0.005 | 0.56 | 0.0 | 0.04 | 12.62 | 0.00 | 2.053 | 3.79 | 0.32 | 1.6 | 98.4 | 0.0 | -0.96 | 0.62 | 0.78 | 2.23 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.35 | 0.00 | 2.405 | 6.15 | 1.92 | 3.1 | 96.9 | 0.0 | 0.90 | 1.06 | 0.62 | 0.85 | 2.39 | 8753 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8X17 | 37986 | 2024-11-15 | 2023-11-06 | 3.19 | 3.42 | 3.20 | 3.4 | 0.005 | 0.56 | 0.0 | 0.04 | 12.62 | 0.00 | 2.053 | 3.79 | 0.32 | 1.6 | 98.4 | 0.0 | -0.96 | 0.62 | 0.78 | 2.23 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.35 | 0.00 | 2.405 | 6.15 | 1.92 | 3.1 | 96.9 | 0.0 | 0.90 | 1.06 | 0.62 | 0.85 | 2.39 | 8753 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8X17 | 37986 | 2024-09-24 | 2023-11-06 | 3.19 | 3.42 | 3.20 | 3.4 | 0.005 | 0.56 | 0.0 | 0.04 | 12.62 | 0.00 | 2.053 | 3.79 | 0.32 | 1.6 | 98.4 | 0.0 | -0.96 | 0.62 | 0.78 | 2.23 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.35 | 0.00 | 2.405 | 6.15 | 1.92 | 3.1 | 96.9 | 0.0 | 0.90 | 1.06 | 0.62 | 0.85 | 2.39 | 8753 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2024-09-24 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.33 | 0.00 | 2.575 | 2.29 | 1.87 | 2.4 | 97.6 | 0.0 | 1.61 | 1.06 | 0.82 | 0.85 | 3.41 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2024-07-19 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.26 | 0.00 | 2.039 | 3.35 | 2.74 | 2.5 | 97.5 | 0.0 | 1.56 | 1.05 | 0.83 | 0.85 | 3.55 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2024-06-25 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 16.19 | 0.00 | 2.291 | 2.76 | 2.85 | 2.9 | 97.1 | 0.0 | 0.82 | 1.04 | 0.83 | 0.86 | 3.59 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2025-03-13 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.30 | 0.00 | 2.510 | 2.23 | 2.96 | 2.7 | 97.3 | 0.0 | 1.57 | 1.05 | 0.82 | 0.85 | 3.48 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2025-02-13 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 16.35 | 0.00 | 2.564 | 2.29 | 2.41 | 2.5 | 97.5 | 0.0 | 1.59 | 1.05 | 0.83 | 0.85 | 3.72 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2025-01-15 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 16.35 | 0.00 | 2.564 | 2.29 | 2.41 | 2.5 | 97.5 | 0.0 | 1.59 | 1.05 | 0.83 | 0.85 | 3.72 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UWL | 42676 | 2024-12-28 | 2023-11-06 | 2.8 | 2.30 | — | 2.9 | 0.013 | 1.69 | 10.0 | 0.12 | 12.38 | 0.01 | 2.079 | 5.47 | 1.43 | 3.0 | 97.0 | 0.0 | 1.81 | 0.83 | 0.83 | 4.24 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.33 | 0.00 | 2.575 | 2.29 | 1.87 | 2.4 | 97.6 | 0.0 | 1.61 | 1.06 | 0.82 | 0.85 | 3.41 | 8626 | 1123 | 6 | 0 | 1 | 0 | 0 | logfile |