Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9B31	44120	2025-05-25	2024-03-18	3.2	3.83	—	3.4	0.004	0.54	0.0	0.04	13.35	0.00	1.918	5.58	0.00	1.7	98.3	0.0	1.78	0.84	0.75	1.87	3.4	0.003	0.48	0.0	0.03	14.76	0.00	2.332	4.99	0.59	2.6	97.4	0.0	2.62	1.33	0.86	0.80	1.38	27078	1682	5	0	0	0	13549	logfile
✔	9B2X	44117	2025-01-17	2024-03-17	3.28	3.63	3.33	3.6	0.003	0.58	0.0	0.05	15.74	0.00	2.029	3.98	0.47	6.5	93.5	0.0	-1.06	0.71	0.81	3.26	3.6	0.004	0.60	0.0	0.05	14.87	0.00	2.520	3.47	0.71	7.9	92.1	0.0	-0.72	1.39	0.73	0.84	2.98	10860	1386	6	0	6	0	0	logfile
✔	9B2X	44117	2025-06-09	2024-03-17	3.28	3.63	3.34	3.6	0.003	0.65	0.0	0.05	15.74	0.00	2.199	3.98	0.47	6.5	93.5	0.0	-1.06	0.71	0.81	3.26	3.6	0.002	0.59	0.0	0.04	14.79	0.00	2.545	3.25	0.32	5.9	94.1	0.0	-0.27	1.40	0.72	0.83	2.94	10860	1386	6	0	6	0	0	logfile
✔	9B2X	44117	2025-05-13	2024-03-17	3.28	3.63	3.34	3.6	0.003	0.65	0.0	0.05	15.74	0.00	2.199	3.98	0.47	6.5	93.5	0.0	-1.06	0.71	0.81	3.26	3.6	0.002	0.59	0.0	0.05	14.79	0.00	2.540	3.52	0.47	6.3	93.7	0.0	-0.36	1.39	0.72	0.83	2.89	10860	1386	6	0	6	0	0	logfile
✔	9B2X	44117	2024-12-29	2024-03-17	3.28	3.63	3.33	3.6	0.003	0.58	0.0	0.05	15.74	0.00	2.029	3.98	0.47	6.5	93.5	0.0	-1.06	0.71	0.81	3.26	3.6	0.003	0.57	0.0	0.05	14.80	0.00	2.514	3.47	0.63	7.4	92.6	0.0	-0.34	1.01	0.73	0.82	2.81	10860	1386	6	0	6	0	0	logfile
✔	9B2X	44117	2024-11-16	2024-03-17	3.28	3.63	3.33	3.6	0.003	0.58	0.0	0.05	15.74	0.00	2.029	3.98	0.47	6.5	93.5	0.0	-1.06	0.71	0.81	3.26	3.6	0.003	0.57	0.0	0.05	14.80	0.00	2.514	3.47	0.63	7.4	92.6	0.0	-0.34	1.01	0.73	0.82	2.81	10860	1386	6	0	6	0	0	logfile
✔	9B2X	44117	2025-07-29	2024-03-17	3.28	3.63	3.34	3.6	0.003	0.65	0.0	0.05	15.74	0.00	2.199	3.98	0.47	6.5	93.5	0.0	-1.06	0.71	0.81	3.26	3.6	0.002	0.59	0.0	0.04	14.79	0.00	2.545	3.25	0.32	5.9	94.1	0.0	-0.27	1.40	0.72	0.83	2.94	10860	1386	6	0	6	0	0	logfile
✘	9EoZ	19870	2025-05-15	2024-03-16	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14100	1033	11	288	0	0	0	logfile
✘	9EoZ	19870	2025-01-19	2024-03-16	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14100	1033	11	288	0	0	0	logfile
✔	8YPD	39477	2025-05-14	2024-03-16	2.78	3.01	2.78	3.0	0.023	2.27	7.0	0.23	19.28	0.03	2.344	12.10	0.49	0.0	100.0	0.0	0.78	0.71	0.84	4.03	3.0	0.003	0.73	0.0	0.04	20.27	0.00	2.530	8.89	0.39	0.0	100.0	0.0	4.12	0.25	0.70	0.86	3.27	12292	1190	56	0	42	0	0	logfile
✔	8YPD	39477	2025-07-30	2024-03-16	2.78	3.01	2.78	3.0	0.023	2.27	7.0	0.23	19.28	0.03	2.344	12.10	0.49	0.0	100.0	0.0	0.78	0.71	0.84	4.03	3.0	0.003	0.71	0.0	0.04	20.17	0.00	2.539	9.05	0.29	0.1	99.9	0.0	4.14	0.25	0.68	0.85	3.29	12292	1190	56	0	42	0	0	logfile
✔	8YPD	39477	2025-06-10	2024-03-16	2.78	3.01	2.78	3.0	0.023	2.27	7.0	0.23	19.28	0.03	2.344	12.10	0.49	0.0	100.0	0.0	0.78	0.71	0.84	4.03	3.0	0.003	0.71	0.0	0.04	20.17	0.00	2.539	9.05	0.29	0.1	99.9	0.0	4.14	0.25	0.68	0.85	3.29	12292	1190	56	0	42	0	0	logfile
✔	9B2T	44114	2025-06-13	2024-03-16	2.99	3.43	2.99	3.3	0.004	0.58	0.0	0.03	27.11	0.00	2.131	7.87	2.24	2.5	97.5	0.0	1.58	0.85	0.87	1.93	3.3	0.004	0.60	0.0	0.04	27.11	0.00	2.487	6.51	1.71	2.8	97.2	0.0	1.69	2.20	0.87	0.89	1.63	15194	1098	11	314	0	0	0	logfile
✔	9B2T	44114	2025-05-16	2024-03-16	2.99	3.43	2.99	3.3	0.004	0.58	0.0	0.03	27.11	0.00	2.131	7.87	2.24	2.5	97.5	0.0	1.58	0.85	0.87	1.93	3.3	0.004	0.61	0.0	0.04	27.11	0.00	2.504	6.79	1.71	3.0	97.0	0.0	1.62	2.21	0.87	0.89	1.67	15194	1098	11	314	0	0	0	logfile
✘	9EoZ	19870	2024-11-17	2024-03-16	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14100	1033	11	288	0	0	0	logfile
✘	9EoZ	19870	2025-07-31	2024-03-16	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14100	1033	11	288	0	0	0	logfile
✘	9EoZ	19870	2024-12-30	2024-03-16	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14100	1033	11	288	0	0	0	logfile
✘	9EoZ	19870	2025-06-12	2024-03-16	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14100	1033	11	288	0	0	0	logfile
✔	9B2U	44115	2025-03-05	2024-03-16	3.64	3.89	3.64	3.9	0.003	0.78	0.0	0.04	17.96	0.00	2.144	14.41	0.67	4.3	95.7	0.0	-0.49	0.45	0.58	0.86	3.8	0.004	0.69	0.0	0.05	18.43	0.00	2.514	10.29	4.33	6.1	93.9	0.0	-0.80	0.78	0.57	0.69	1.43	2672	333	2	0	0	0	0	logfile
✔	9B2U	44115	2025-04-26	2024-03-16	3.64	3.89	3.64	3.9	0.003	0.78	0.0	0.04	17.96	0.00	2.144	14.41	0.67	4.3	95.7	0.0	-0.49	0.45	0.58	0.86	3.8	0.004	0.69	0.0	0.05	18.43	0.00	2.514	10.29	4.33	6.1	93.9	0.0	-0.80	0.78	0.57	0.69	1.43	2672	333	2	0	0	0	0	logfile

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