Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XSJ	38620	2024-11-17	2024-01-09	2.61	2.30	2.66	2.1	0.003	0.63	0.0	0.04	13.66	0.01	2.001	6.19	0.10	4.4	95.4	0.2	-0.03	0.75	0.74	3.16	2.1	0.003	0.59	0.0	0.04	15.49	0.01	2.330	5.04	1.05	3.7	96.1	0.2	0.19	0.32	0.79	0.78	2.43	9740	1215	7	0	9	0	0	logfile
✘	8XSJ	38620	2024-10-13	2024-01-09	2.61	2.30	2.66	2.1	0.003	0.63	0.0	0.04	13.66	0.01	2.001	6.19	0.10	4.4	95.4	0.2	-0.03	0.75	0.74	3.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9740	1215	7	0	9	0	0	logfile
✔	8XSJ	38620	2024-09-27	2024-01-09	2.61	2.30	2.66	2.1	0.003	0.63	0.0	0.04	13.66	0.01	2.001	6.19	0.10	4.4	95.4	0.2	-0.03	0.75	0.74	3.16	2.1	0.003	0.59	0.0	0.04	15.49	0.01	2.330	5.04	1.05	3.7	96.1	0.2	0.19	0.32	0.79	0.78	2.43	9740	1215	7	0	9	0	0	logfile
✔	8XSJ	38620	2024-08-06	2024-01-09	2.61	2.30	2.66	2.1	0.003	0.63	0.0	0.04	13.66	0.01	2.001	6.19	0.10	4.4	95.4	0.2	-0.03	0.75	0.74	3.16	2.1	0.003	0.59	0.0	0.04	15.49	0.01	2.330	5.04	1.05	3.7	96.1	0.2	0.19	0.32	0.79	0.78	2.43	9740	1215	7	0	9	0	0	logfile
✔	8XSJ	38620	2025-05-16	2024-01-09	2.61	2.30	2.67	2.1	0.004	0.63	0.0	0.04	13.66	0.01	2.001	6.19	0.10	4.4	95.4	0.2	-0.03	0.75	0.74	3.16	2.1	0.003	0.60	0.0	0.04	15.59	0.01	2.302	4.93	1.14	3.7	96.1	0.2	0.13	0.33	0.80	0.79	2.54	9740	1215	7	0	9	0	0	logfile
✔	8XSJ	38620	2025-01-20	2024-01-09	2.61	2.30	2.66	2.1	0.003	0.63	0.0	0.04	13.66	0.01	2.001	6.19	0.10	4.4	95.4	0.2	-0.03	0.75	0.74	3.16	2.1	0.003	0.60	0.0	0.04	15.57	0.01	2.305	5.35	1.24	3.5	96.3	0.2	0.19	0.33	0.80	0.79	2.59	9740	1215	7	0	9	0	0	logfile
✘	8VKE	43315	2024-10-10	2024-01-09	3.1	3.35	3.10	3.3	0.003	0.59	0.0	0.04	14.19	0.00	2.103	5.82	0.14	2.6	97.4	0.0	-0.05	0.77	0.85	4.03	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6652	854	8	0	2	0	0	logfile
✔	8RN6	19388	2025-01-25	2024-01-09	2.82	3.09	2.90	3.1	0.003	0.57	0.0	0.04	17.61	0.00	2.145	5.82	2.21	4.4	95.6	0.1	0.28	0.65	0.86	3.72	3.1	0.003	0.57	0.0	0.04	17.57	0.00	2.188	4.12	2.53	4.4	95.5	0.1	0.29	0.33	0.62	0.86	3.87	23047	1455	3	0	0	0	11505	logfile
✔	8RN6	19388	2025-05-22	2024-01-09	2.82	3.09	2.90	3.1	0.003	0.57	0.0	0.04	17.61	0.00	2.145	5.82	2.21	4.4	95.6	0.1	0.28	0.65	0.86	3.72	3.1	0.003	0.57	0.0	0.04	17.57	0.00	2.188	4.12	2.53	4.4	95.5	0.1	0.29	0.33	0.62	0.86	3.87	23047	1455	3	0	0	0	11505	logfile
✔	8RN6	19388	2024-09-29	2024-01-09	2.82	3.09	2.90	3.1	0.003	0.57	0.0	0.04	17.61	0.00	2.145	5.82	2.21	4.4	95.6	0.1	0.28	0.65	0.86	3.72	3.1	0.003	0.57	0.0	0.04	17.56	0.00	2.173	4.21	2.77	4.5	95.4	0.1	0.28	0.33	0.62	0.85	3.88	23047	1455	3	0	0	0	11505	logfile
✔	8VKE	43315	2025-03-11	2024-01-09	3.1	3.35	3.09	3.3	0.003	0.59	0.0	0.04	14.19	0.00	2.103	5.82	0.14	2.6	97.4	0.0	-0.05	0.77	0.85	4.03	3.3	0.004	0.59	0.0	0.05	15.11	0.00	2.459	4.60	2.58	3.8	96.2	0.0	-0.72	0.32	0.70	0.82	3.60	6652	854	8	0	2	0	0	logfile
✔	8XSD	38616	2025-05-29	2024-01-09	3.55	3.86	3.87	81.0	0.004	0.81	0.0	0.05	13.97	0.01	2.189	7.35	0.27	6.5	93.2	0.2	-2.62	0.08	0.01	0.17	84.0	0.004	0.82	0.0	0.05	16.19	0.01	2.344	13.23	3.01	8.2	91.7	0.1	-2.40	1.17	0.14	0.16	0.19	29708	3819	9	0	0	0	0	logfile
✔	8RN8	19390	2024-12-28	2024-01-09	2.92	3.12	2.96	3.1	0.003	0.50	0.0	0.04	17.76	0.00	1.884	6.27	1.95	3.6	96.3	0.1	0.59	0.67	0.81	2.99	3.1	0.004	0.68	1.0	0.04	17.92	0.00	2.066	5.27	1.77	3.9	96.0	0.1	0.39	0.93	0.68	0.83	2.99	51366	3234	9	0	5	0	25704	logfile
✔	8RN8	19390	2024-10-10	2024-01-09	2.92	3.12	2.96	3.1	0.003	0.50	0.0	0.04	17.76	0.00	1.884	6.27	1.95	3.6	96.3	0.1	0.59	0.67	0.81	2.99	3.1	0.004	0.68	1.0	0.04	17.92	0.00	2.066	5.27	1.77	3.9	96.0	0.1	0.39	0.93	0.68	0.83	2.99	51366	3234	9	0	5	0	25704	logfile
✔	8RN8	19390	2024-11-19	2024-01-09	2.92	3.12	2.96	3.1	0.003	0.50	0.0	0.04	17.76	0.00	1.884	6.27	1.95	3.6	96.3	0.1	0.59	0.67	0.81	2.99	3.1	0.004	0.68	1.0	0.04	17.92	0.00	2.066	5.27	1.77	3.9	96.0	0.1	0.39	0.93	0.68	0.83	2.99	51366	3234	9	0	5	0	25704	logfile
✔	8RN8	19390	2025-01-15	2024-01-09	2.92	3.12	2.96	3.1	0.003	0.50	0.0	0.04	17.76	0.00	1.884	6.27	1.95	3.6	96.3	0.1	0.59	0.67	0.81	2.99	3.1	0.004	0.71	1.0	0.04	17.95	0.00	2.137	5.29	2.24	4.5	95.4	0.1	0.08	0.92	0.68	0.83	3.08	51366	3234	9	0	5	0	25704	logfile
✔	8RN8	19390	2024-09-24	2024-01-09	2.92	3.12	2.96	3.1	0.003	0.50	0.0	0.04	17.76	0.00	1.884	6.27	1.95	3.6	96.3	0.1	0.59	0.67	0.81	2.99	3.1	0.004	0.81	0.0	0.04	17.95	0.00	2.127	5.31	2.20	4.4	95.5	0.1	0.17	0.93	0.68	0.83	3.04	51366	3234	9	0	5	0	25704	logfile
✘	8VKE	43315	2024-11-14	2024-01-09	3.1	3.35	3.10	3.3	0.003	0.59	0.0	0.04	14.19	0.00	2.103	5.82	0.14	2.6	97.4	0.0	-0.05	0.77	0.85	4.03	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6652	854	8	0	2	0	0	logfile
✘	8VKE	43315	2024-12-27	2024-01-09	3.1	3.35	3.10	3.3	0.003	0.59	0.0	0.04	14.19	0.00	2.103	5.82	0.14	2.6	97.4	0.0	-0.05	0.77	0.85	4.03	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6652	854	8	0	2	0	0	logfile
✔	8XSF	38618	2025-05-17	2024-01-09	2.16	2.17	2.22	1.8	0.003	0.59	0.0	0.04	12.92	0.01	2.140	6.66	0.19	3.5	96.4	0.1	0.99	0.73	0.69	2.89	1.9	0.003	0.63	0.0	0.04	15.84	0.00	2.011	5.14	1.97	3.1	96.9	0.1	0.84	1.08	0.78	0.76	2.66	9736	1221	6	0	5	0	0	logfile

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