Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9AXA	43931	2024-10-12	2024-03-06	4.36	3.98	4.18	3.8	0.004	0.98	0.0	0.05	14.52	0.01	2.237	6.73	0.44	4.3	95.6	0.1	-0.95	0.83	0.78	—	3.8	0.003	0.70	0.0	0.04	14.61	0.00	2.376	12.69	0.00	5.1	94.9	0.1	0.37	1.87	0.84	0.79	—	12421	1553	8	0	2	0	0	logfile
✔	9AXA	43931	2025-07-30	2024-03-06	4.36	3.98	4.17	3.8	0.004	0.98	0.0	0.05	14.52	0.01	2.237	6.73	0.44	4.3	95.6	0.1	-0.95	0.83	0.78	—	3.8	0.003	0.72	0.0	0.05	14.62	0.00	2.349	12.45	0.00	5.1	94.9	0.1	0.20	1.87	0.84	0.79	—	12421	1553	8	0	2	0	0	logfile
✔	9AXA	43931	2025-05-15	2024-03-06	4.36	3.98	4.17	3.8	0.004	0.98	0.0	0.05	14.52	0.01	2.237	6.73	0.44	4.3	95.6	0.1	-0.95	0.83	0.78	—	3.8	0.003	0.70	0.0	0.04	14.60	0.00	2.403	10.59	0.00	4.4	95.5	0.1	0.28	1.87	0.84	0.79	—	12421	1553	8	0	2	0	0	logfile
✔	9AXA	43931	2025-06-11	2024-03-06	4.36	3.98	4.17	3.8	0.004	0.98	0.0	0.05	14.52	0.01	2.237	6.73	0.44	4.3	95.6	0.1	-0.95	0.83	0.78	—	3.8	0.003	0.72	0.0	0.05	14.62	0.00	2.349	12.45	0.00	5.1	94.9	0.1	0.20	1.87	0.84	0.79	—	12421	1553	8	0	2	0	0	logfile
✔	9AXE	43965	2024-12-31	2024-03-06	3.1	3.85	3.22	3.5	0.007	0.72	0.0	0.06	13.29	0.00	1.561	6.46	0.00	2.7	97.3	0.0	-0.63	0.77	0.79	1.92	3.5	0.003	0.56	0.0	0.04	15.29	0.00	2.519	8.62	1.07	2.8	97.2	0.0	0.76	1.80	0.77	0.85	2.44	65632	8106	14	0	0	0	0	logfile
✔	9AXE	43965	2025-01-20	2024-03-06	3.1	3.85	3.22	3.5	0.007	0.72	0.0	0.06	13.29	0.00	1.561	6.46	0.00	2.7	97.3	0.0	-0.63	0.77	0.79	1.92	3.5	0.003	0.55	0.0	0.04	15.26	0.00	2.544	8.49	1.00	2.7	97.3	0.0	0.80	1.79	0.77	0.85	2.46	65632	8106	14	0	0	0	0	logfile
✔	8YLT	39390	2024-12-31	2024-03-06	3.09	3.71	3.14	3.4	0.007	0.89	0.0	0.04	15.91	0.00	2.215	4.00	0.90	2.7	97.3	0.0	0.18	0.76	0.74	2.29	3.4	0.006	0.72	2.0	0.04	16.09	0.00	2.136	4.03	0.99	4.0	96.0	0.0	1.04	0.50	0.76	0.75	2.08	65834	3978	8	0	4	0	32508	logfile
✔	8YLT	39390	2024-10-13	2024-03-06	3.09	3.71	3.14	3.4	0.007	0.89	0.0	0.04	15.91	0.00	2.215	4.00	0.90	2.7	97.3	0.0	0.18	0.76	0.74	2.29	3.4	0.006	0.72	2.0	0.04	16.09	0.00	2.136	4.03	0.99	4.0	96.0	0.0	1.04	0.50	0.76	0.75	2.08	65834	3978	8	0	4	0	32508	logfile
✔	8YLT	39390	2025-01-21	2024-03-06	3.09	3.71	3.14	3.4	0.007	0.89	0.0	0.04	15.91	0.00	2.215	4.00	0.90	2.7	97.3	0.0	0.18	0.76	0.74	2.29	3.4	0.004	0.48	0.0	0.04	15.99	0.00	2.160	2.99	0.63	3.5	96.5	0.0	1.48	0.47	0.77	0.76	2.10	65834	3978	8	0	4	0	32508	logfile
✔	9AXE	43965	2024-10-13	2024-03-06	3.1	3.85	3.22	3.5	0.007	0.72	0.0	0.06	13.29	0.00	1.561	6.46	0.00	2.7	97.3	0.0	-0.63	0.77	0.79	1.92	3.5	0.003	0.56	0.0	0.04	15.29	0.00	2.519	8.62	1.07	2.8	97.2	0.0	0.76	1.80	0.77	0.85	2.44	65632	8106	14	0	0	0	0	logfile
✔	9AXL	43969	2025-06-10	2024-03-06	3.3	3.54	3.22	3.6	0.013	1.02	1.0	0.05	16.02	0.01	1.949	8.57	0.55	7.3	92.4	0.3	-1.38	0.70	0.80	2.77	3.6	0.003	0.59	0.0	0.04	16.14	0.00	2.006	5.51	2.29	5.9	93.9	0.2	-0.62	0.89	0.68	0.84	2.39	11748	1555	6	0	7	7	0	logfile
✔	9AXL	43969	2024-12-30	2024-03-06	3.3	3.54	3.23	3.6	0.013	1.02	1.0	0.05	16.02	0.01	1.949	8.57	0.55	7.3	92.4	0.3	-1.38	0.70	0.80	2.77	3.6	0.002	0.58	0.0	0.04	16.19	0.00	1.997	5.37	2.45	5.4	94.4	0.2	-0.53	0.90	0.68	0.84	2.42	11748	1555	6	0	7	7	0	logfile
✔	9AXL	43969	2025-07-29	2024-03-06	3.3	3.54	3.22	3.6	0.013	1.02	1.0	0.05	16.02	0.01	1.949	8.57	0.55	7.3	92.4	0.3	-1.38	0.70	0.80	2.77	3.6	0.003	0.59	0.0	0.04	16.14	0.00	2.006	5.51	2.29	5.9	93.9	0.2	-0.62	0.89	0.68	0.84	2.39	11748	1555	6	0	7	7	0	logfile
✔	9AXL	43969	2025-01-18	2024-03-06	3.3	3.54	3.23	3.6	0.013	1.02	1.0	0.05	16.02	0.01	1.949	8.57	0.55	7.3	92.4	0.3	-1.38	0.70	0.80	2.77	3.6	0.003	0.58	0.0	0.04	16.13	0.00	1.989	5.50	2.29	6.1	93.7	0.2	-0.68	0.89	0.68	0.85	2.39	11748	1555	6	0	7	7	0	logfile
✔	9AXL	43969	2025-05-14	2024-03-06	3.3	3.54	3.22	3.6	0.013	1.02	1.0	0.05	16.02	0.01	1.949	8.57	0.55	7.3	92.4	0.3	-1.38	0.70	0.80	2.77	3.6	0.003	0.59	0.0	0.04	16.14	0.01	2.003	5.59	2.06	6.1	93.7	0.2	-0.62	0.89	0.68	0.85	2.41	11748	1555	6	0	7	7	0	logfile
✔	9AXF	43966	2025-01-24	2024-03-06	3.5	2.15	—	2.9	0.005	0.78	0.0	0.06	13.15	0.00	2.162	5.78	0.00	2.4	97.6	0.0	0.13	0.80	0.80	4.05	2.9	0.004	0.58	0.0	0.04	14.26	0.00	2.253	4.11	2.89	3.1	96.9	0.0	0.53	0.33	0.81	0.80	3.68	21342	2607	15	0	40	0	0	logfile
✘	9AXF	43966	2024-11-20	2024-03-06	3.5	2.15	—	2.9	0.005	0.78	0.0	0.06	13.15	0.00	2.162	5.78	0.00	2.4	97.6	0.0	0.13	0.80	0.80	4.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21342	2607	15	0	40	0	0	logfile
✔	9AXF	43966	2025-05-21	2024-03-06	3.5	2.15	—	2.9	0.005	0.78	0.0	0.06	13.15	0.00	2.162	5.78	0.00	2.4	97.6	0.0	0.13	0.80	0.80	4.05	2.9	0.004	0.59	0.0	0.04	14.24	0.00	2.244	4.08	2.67	3.0	97.0	0.0	0.51	0.33	0.81	0.80	3.64	21342	2607	15	0	40	0	0	logfile
✔	9AXF	43966	2025-06-18	2024-03-06	3.5	2.15	—	2.9	0.005	0.78	0.0	0.06	13.15	0.00	2.162	5.78	0.00	2.4	97.6	0.0	0.13	0.80	0.80	4.05	2.9	0.003	0.57	0.0	0.04	14.24	0.00	2.261	3.99	2.58	3.0	97.0	0.0	0.62	0.33	0.81	0.80	3.65	21342	2607	15	0	40	0	0	logfile
✔	8YLP	39388	2025-04-28	2024-03-06	2.9	2.96	2.87	3.0	0.008	1.06	0.0	0.06	15.87	0.01	2.298	3.90	0.51	8.5	91.0	0.5	-3.15	0.62	0.80	2.92	2.9	0.003	0.71	0.0	0.04	15.52	0.00	2.464	5.18	1.92	8.2	91.7	0.1	0.92	0.50	0.66	0.85	2.22	7397	936	7	0	8	0	0	logfile

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