Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y3o	38893	2024-10-14	2024-01-29	2.75	3.08	2.94	3.1	0.003	0.75	0.0	0.05	13.07	0.01	2.217	6.58	0.00	4.1	95.9	0.0	-1.28	0.64	0.76	3.15	3.1	0.008	0.75	0.0	0.05	16.11	0.01	2.453	10.90	2.51	5.5	94.5	0.0	-1.44	0.38	0.62	0.78	3.23	17058	2163	9	0	0	0	0	logfile
✔	8Y3o	38893	2024-09-27	2024-01-29	2.75	3.08	2.94	3.1	0.003	0.75	0.0	0.05	13.07	0.01	2.217	6.58	0.00	4.1	95.9	0.0	-1.28	0.64	0.76	3.15	3.1	0.008	0.75	0.0	0.05	16.11	0.01	2.453	10.90	2.51	5.5	94.5	0.0	-1.44	0.38	0.62	0.78	3.23	17058	2163	9	0	0	0	0	logfile
✔	8Y3o	38893	2025-06-15	2024-01-29	2.75	3.08	2.94	3.1	0.003	0.75	0.0	0.05	13.07	0.01	2.217	6.58	0.00	4.1	95.9	0.0	-1.28	0.64	0.76	3.15	3.1	0.003	0.60	0.0	0.05	15.93	0.00	2.536	8.19	2.03	3.8	96.2	0.0	-0.97	0.35	0.62	0.77	2.88	17058	2163	9	0	0	0	0	logfile
✔	8Y3o	38893	2025-05-18	2024-01-29	2.75	3.08	2.94	3.1	0.003	0.75	0.0	0.05	13.07	0.01	2.217	6.58	0.00	4.1	95.9	0.0	-1.28	0.64	0.76	3.15	3.1	0.004	0.63	0.0	0.05	16.01	0.00	2.529	8.99	2.08	4.5	95.5	0.0	-1.09	0.36	0.62	0.77	3.05	17058	2163	9	0	0	0	0	logfile
✔	8Y3N	38892	2025-01-13	2024-01-29	3.8	4.11	3.77	4.1	0.007	0.82	0.0	0.05	13.36	0.01	2.382	11.92	0.00	11.9	88.1	0.0	-3.00	0.45	0.80	3.56	4.2	0.005	0.71	0.0	0.05	15.55	0.01	2.590	8.67	1.97	10.5	89.5	0.0	-1.61	1.03	0.43	0.79	3.15	3694	494	4	0	0	0	0	logfile
✔	8Y3N	38892	2024-11-14	2024-01-29	3.8	4.11	3.77	4.1	0.007	0.82	0.0	0.05	13.36	0.01	2.382	11.92	0.00	11.9	88.1	0.0	-3.00	0.45	0.80	3.56	4.1	0.003	0.68	0.0	0.04	15.87	0.01	2.411	7.58	1.48	4.6	95.4	0.0	-1.32	1.04	0.42	0.78	2.81	3694	494	4	0	0	0	0	logfile
✔	8Y3N	38892	2025-06-04	2024-01-29	3.8	4.11	3.76	4.1	0.007	0.82	0.0	0.05	13.36	0.01	2.382	11.92	0.00	11.9	88.1	0.0	-3.00	0.45	0.80	3.56	4.1	0.003	0.63	0.0	0.04	15.51	0.01	2.604	8.67	1.72	5.4	94.6	0.0	-1.26	1.04	0.42	0.78	3.56	3694	494	4	0	0	0	0	logfile
✔	8VUS	43538	2025-06-21	2024-01-29	3.99	4.28	4.05	4.1	0.004	0.67	0.0	0.04	16.76	0.00	2.100	12.56	0.34	13.2	86.4	0.4	-2.35	0.82	0.81	1.49	4.1	0.008	0.85	0.0	0.05	17.21	0.01	2.418	12.45	6.96	16.0	83.5	0.5	-2.64	0.33	0.82	0.81	1.34	25006	3475	8	0	0	0	0	logfile
✔	8RTT	19496	2024-10-14	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.003	0.58	0.0	0.04	16.85	0.00	1.965	6.38	2.10	2.5	97.5	0.0	1.11	0.38	0.79	0.86	1.89	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2025-06-16	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.55	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.006	0.92	2.0	0.05	16.83	0.00	1.738	7.57	2.20	3.1	96.9	0.0	0.87	0.36	0.79	0.87	1.84	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2025-05-19	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.55	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.004	0.62	0.0	0.04	16.85	0.00	1.908	6.43	2.25	2.6	97.4	0.0	1.01	0.38	0.79	0.87	1.98	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2025-01-22	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.004	0.62	0.0	0.04	16.85	0.00	1.908	6.43	2.25	2.6	97.4	0.0	1.01	0.38	0.79	0.87	1.98	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2024-11-19	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.003	0.58	0.0	0.04	16.85	0.00	1.965	6.38	2.10	2.5	97.5	0.0	1.11	0.38	0.79	0.86	1.89	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2024-09-28	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.003	0.58	0.0	0.04	16.85	0.00	1.965	6.38	2.10	2.5	97.5	0.0	1.11	0.38	0.79	0.86	1.89	18155	2274	16	0	14	0	0	logfile
✔	8RU0	19501	2025-05-14	2024-01-29	3.08	3.41	3.21	3.4	0.002	0.49	0.0	0.04	16.57	0.00	2.068	6.05	0.24	2.1	97.8	0.1	-0.20	0.64	0.83	2.63	3.4	0.004	0.86	1.0	0.05	16.36	0.00	1.986	5.45	2.73	3.2	96.7	0.1	0.31	1.31	0.64	0.83	2.31	11660	1476	8	0	11	0	0	logfile
✔	8RU0	19501	2024-12-29	2024-01-29	3.08	3.41	3.21	3.4	0.002	0.49	0.0	0.04	16.57	0.00	2.068	6.05	0.24	2.1	97.8	0.1	-0.20	0.64	0.83	2.63	3.4	0.002	0.55	0.0	0.04	16.27	0.00	2.026	4.89	2.41	2.6	97.3	0.1	0.61	1.31	0.64	0.83	2.24	11660	1476	8	0	11	0	0	logfile
✔	8RU0	19501	2024-11-16	2024-01-29	3.08	3.41	3.21	3.4	0.002	0.49	0.0	0.04	16.57	0.00	2.068	6.05	0.24	2.1	97.8	0.1	-0.20	0.64	0.83	2.63	3.4	0.002	0.55	0.0	0.04	16.27	0.00	2.026	4.89	2.41	2.6	97.3	0.1	0.61	1.31	0.64	0.83	2.24	11660	1476	8	0	11	0	0	logfile
✔	8RU0	19501	2024-10-12	2024-01-29	3.08	3.41	3.21	3.4	0.002	0.49	0.0	0.04	16.57	0.00	2.068	6.05	0.24	2.1	97.8	0.1	-0.20	0.64	0.83	2.63	3.4	0.002	0.55	0.0	0.04	16.27	0.00	2.026	4.89	2.41	2.6	97.3	0.1	0.61	1.31	0.64	0.83	2.24	11660	1476	8	0	11	0	0	logfile
✔	8RU0	19501	2024-09-26	2024-01-29	3.08	3.41	3.21	3.4	0.002	0.49	0.0	0.04	16.57	0.00	2.068	6.05	0.24	2.1	97.8	0.1	-0.20	0.64	0.83	2.63	3.4	0.002	0.55	0.0	0.04	16.27	0.00	2.026	4.89	2.41	2.6	97.3	0.1	0.61	1.31	0.64	0.83	2.24	11660	1476	8	0	11	0	0	logfile
✔	8RU0	19501	2025-01-18	2024-01-29	3.08	3.41	3.21	3.4	0.002	0.49	0.0	0.04	16.57	0.00	2.068	6.05	0.24	2.1	97.8	0.1	-0.20	0.64	0.83	2.63	3.4	0.004	0.86	1.0	0.05	16.36	0.00	1.986	5.45	2.73	3.2	96.7	0.1	0.31	1.31	0.64	0.83	2.31	11660	1476	8	0	11	0	0	logfile

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