Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YYW	39681	2025-06-07	2024-04-04	3.16	3.46	3.22	3.4	0.004	0.62	0.0	0.04	17.19	0.00	2.201	7.65	0.50	5.4	94.6	0.0	0.16	0.66	0.88	3.04	3.4	0.003	0.58	0.0	0.04	17.58	0.00	2.498	4.38	3.29	5.0	95.0	0.0	0.46	0.89	0.65	0.88	2.94	9068	1153	6	0	2	0	0	logfile
✔	8YYW	39681	2025-08-23	2024-04-04	3.16	3.46	3.22	3.4	0.004	0.62	0.0	0.04	17.19	0.00	2.201	7.49	0.50	5.4	94.6	0.0	0.16	0.66	0.88	3.04	3.4	0.003	0.59	0.0	0.04	17.57	0.00	2.360	4.38	2.49	5.2	94.8	0.0	0.50	0.89	0.64	0.88	3.01	9068	1153	6	0	2	0	0	logfile
✔	8YYW	39681	2025-05-12	2024-04-04	3.16	3.46	3.22	3.4	0.004	0.62	0.0	0.04	17.19	0.00	2.201	7.65	0.50	5.4	94.6	0.0	0.16	0.66	0.88	3.04	3.4	0.007	0.70	0.0	0.05	17.67	0.00	2.172	4.94	4.59	6.0	94.0	0.0	0.14	0.89	0.65	0.89	3.10	9068	1153	6	0	2	0	0	logfile
✔	8YYW	39681	2025-07-27	2024-04-04	3.16	3.46	3.22	3.4	0.004	0.62	0.0	0.04	17.19	0.00	2.201	7.65	0.50	5.4	94.6	0.0	0.16	0.66	0.88	3.04	3.4	0.003	0.58	0.0	0.04	17.58	0.00	2.498	4.38	3.29	5.0	95.0	0.0	0.46	0.89	0.65	0.88	2.94	9068	1153	6	0	2	0	0	logfile
✔	8YYW	39681	2025-04-30	2024-04-04	3.16	3.46	3.22	3.4	0.004	0.62	0.0	0.04	17.19	0.00	2.201	7.65	0.50	5.4	94.6	0.0	0.16	0.66	0.88	3.04	3.4	0.003	0.58	0.0	0.04	17.58	0.00	2.498	4.38	3.29	5.0	95.0	0.0	0.46	0.89	0.65	0.88	2.94	9068	1153	6	0	2	0	0	logfile
✘	9BAQ	44411	2024-11-15	2024-04-04	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9733	1154	9	36	1	0	0	logfile
✘	9BAQ	44411	2024-12-29	2024-04-04	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9733	1154	9	36	1	0	0	logfile
✘	9BAQ	44411	2025-06-08	2024-04-04	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9733	1153	8	36	2	0	0	logfile
✘	9BAQ	44411	2025-05-13	2024-04-04	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9733	1153	8	36	2	0	0	logfile
✔	9BA5	44396	2025-01-16	2024-04-03	3.51	2.38	3.57	3.6	0.011	1.26	2.0	0.07	12.94	0.01	2.389	2.35	0.00	5.3	94.7	0.0	-1.42	0.61	0.60	1.98	3.6	0.005	0.65	0.0	0.04	14.56	0.00	2.563	8.51	1.66	3.2	96.8	0.0	-0.23	1.16	0.65	0.62	1.61	9012	1146	4	0	10	0	0	logfile
✔	8YY0	39662	2025-01-19	2024-04-03	3.6	4.03	3.54	2.6	0.004	0.85	0.0	0.05	5.98	0.01	2.470	1.56	0.00	5.8	94.0	0.2	1.32	0.67	0.72	—	2.5	0.003	0.56	0.0	0.04	5.80	0.00	2.415	0.71	0.00	7.5	92.5	0.0	1.42	0.21	0.67	0.72	—	14117	1845	14	0	0	0	5020	logfile
✔	8YY0	39662	2025-05-16	2024-04-03	3.6	4.03	3.54	2.6	0.004	0.85	0.0	0.05	5.98	0.01	2.470	1.56	0.00	5.8	94.0	0.2	1.32	0.67	0.72	—	2.5	0.003	0.56	0.0	0.04	5.80	0.00	2.415	0.71	0.00	7.5	92.5	0.0	1.42	0.21	0.67	0.72	—	14117	1845	14	0	0	0	5020	logfile
✔	8YY0	39662	2025-06-12	2024-04-03	3.6	4.03	3.54	2.6	0.004	0.85	0.0	0.05	5.98	0.01	2.470	1.56	0.00	5.8	94.0	0.2	1.32	0.67	0.72	—	2.5	0.004	0.59	0.0	0.04	5.90	0.00	2.405	0.71	0.00	8.0	92.0	0.0	1.15	0.22	0.67	0.73	—	14117	1845	14	0	0	0	5020	logfile
✔	8YY0	39662	2025-07-31	2024-04-03	3.6	4.03	3.54	2.6	0.004	0.85	0.0	0.05	5.98	0.01	2.470	1.56	0.00	5.8	94.0	0.2	1.32	0.67	0.72	—	2.5	0.004	0.59	0.0	0.04	5.90	0.00	2.405	0.71	0.00	8.0	92.0	0.0	1.15	0.22	0.67	0.73	—	14117	1845	14	0	0	0	5020	logfile
✔	8YY0	39662	2025-08-23	2024-04-03	3.6	4.03	3.54	2.6	0.004	0.85	0.0	0.05	5.98	0.01	2.470	1.56	0.00	5.8	94.0	0.2	1.32	0.67	0.72	—	2.5	0.004	0.60	0.0	0.04	5.87	0.00	2.390	0.85	0.00	7.5	92.5	0.0	1.27	0.21	0.67	0.72	—	14117	1845	14	0	0	0	5020	logfile
✔	8YY0	39662	2024-12-30	2024-04-03	3.6	4.03	3.54	2.6	0.004	0.85	0.0	0.05	5.98	0.01	2.470	1.56	0.00	5.8	94.0	0.2	1.32	0.67	0.72	—	2.5	0.004	0.62	0.0	0.04	5.95	0.00	2.390	1.13	0.00	8.2	91.8	0.0	0.96	0.20	0.67	0.73	—	14117	1845	14	0	0	0	5020	logfile
✔	9BA5	44396	2024-12-28	2024-04-03	3.51	2.38	3.57	3.6	0.011	1.26	2.0	0.07	12.94	0.01	2.389	2.35	0.00	5.3	94.7	0.0	-1.42	0.61	0.60	1.98	3.6	0.004	0.61	0.0	0.04	14.52	0.00	2.592	7.73	1.87	2.5	97.5	0.0	-0.20	1.15	0.65	0.61	1.76	9012	1146	4	0	10	0	0	logfile
✔	9BA5	44396	2024-11-15	2024-04-03	3.51	2.38	3.57	3.6	0.011	1.26	2.0	0.07	12.94	0.01	2.389	2.35	0.00	5.3	94.7	0.0	-1.42	0.61	0.60	1.98	3.6	0.004	0.61	0.0	0.04	14.52	0.00	2.592	7.73	1.87	2.5	97.5	0.0	-0.20	1.15	0.65	0.61	1.76	9012	1146	4	0	10	0	0	logfile
✔	9BA5	44396	2025-08-23	2024-04-03	3.51	2.38	3.57	3.6	0.011	1.32	2.0	0.07	12.94	0.01	2.389	2.35	0.00	5.3	94.7	0.0	-1.42	0.61	0.60	1.98	3.6	0.005	0.68	0.0	0.04	14.68	0.00	2.582	8.85	1.87	3.6	96.4	0.0	-0.37	1.16	0.65	0.61	1.75	9012	1146	4	0	10	0	0	logfile
✔	9BA5	44396	2025-07-27	2024-04-03	3.51	2.38	3.57	3.6	0.011	1.32	2.0	0.07	12.94	0.01	2.389	2.35	0.00	5.3	94.7	0.0	-1.42	0.61	0.60	1.98	3.6	0.004	0.64	0.0	0.04	14.54	0.00	2.587	7.79	1.87	2.5	97.5	0.0	-0.18	1.15	0.66	0.63	1.66	9012	1146	4	0	10	0	0	logfile

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