Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y3V	38900	2025-04-26	2024-01-29	3.46	3.65	2.21	3.6	0.006	0.73	0.0	0.05	12.74	0.01	2.342	6.61	0.00	11.1	88.9	0.0	-2.06	0.48	0.85	4.09	3.7	0.004	0.66	0.0	0.05	15.13	0.00	2.599	4.76	1.46	8.1	91.9	0.0	-0.57	0.27	0.46	0.84	3.33	3785	513	4	0	0	0	0	logfile
✔	8Y3V	38900	2025-05-09	2024-01-29	3.46	3.65	2.21	3.6	0.006	0.73	0.0	0.05	12.74	0.01	2.342	6.61	0.00	11.1	88.9	0.0	-2.06	0.48	0.85	4.09	3.7	0.003	0.63	0.0	0.05	15.12	0.00	2.572	5.29	1.70	7.9	92.1	0.0	-0.73	0.28	0.45	0.84	3.52	3785	513	4	0	0	0	0	logfile
✔	8Y3V	38900	2025-06-04	2024-01-29	3.46	3.65	2.21	3.6	0.006	0.73	0.0	0.05	12.74	0.01	2.342	6.61	0.00	11.1	88.9	0.0	-2.06	0.48	0.85	4.09	3.7	0.004	0.66	0.0	0.05	15.13	0.00	2.599	4.76	1.46	8.1	91.9	0.0	-0.57	0.27	0.46	0.84	3.33	3785	513	4	0	0	0	0	logfile
✔	8Y3R	38896	2025-05-17	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.003	0.66	0.0	0.05	15.79	0.00	2.235	6.88	3.36	4.6	95.4	0.1	-0.87	0.62	0.71	0.75	1.85	15735	2001	9	0	0	0	0	logfile
✔	8Y3V	38900	2025-07-23	2024-01-29	3.46	3.65	2.21	3.6	0.006	0.73	0.0	0.05	12.74	0.01	2.342	6.61	0.00	11.1	88.9	0.0	-2.06	0.48	0.85	4.09	3.7	0.004	0.66	0.0	0.05	15.13	0.00	2.599	4.76	1.46	8.1	91.9	0.0	-0.57	0.27	0.46	0.84	3.33	3785	513	4	0	0	0	0	logfile
✔	8Y3V	38900	2024-11-14	2024-01-29	3.46	3.65	2.37	3.7	0.006	0.73	0.0	0.05	12.74	0.01	2.342	6.61	0.00	11.1	88.9	0.0	-2.06	0.48	0.85	4.09	3.7	0.004	0.65	0.0	0.05	15.02	0.00	2.567	4.89	1.46	8.5	91.5	0.0	-0.71	0.31	0.46	0.84	3.22	3785	513	4	0	0	0	0	logfile
✔	8Y3M	38889	2025-05-18	2024-01-29	3.25	2.64	—	3.2	0.007	1.17	0.0	0.06	11.37	0.01	2.299	4.87	0.11	11.1	88.3	0.6	-5.56	0.67	0.56	1.24	3.3	0.003	0.71	0.0	0.04	14.96	0.00	2.359	8.81	1.24	9.1	90.5	0.4	-1.37	1.91	0.76	0.75	1.75	16793	2017	3	0	0	0	0	logfile
✔	8Y3M	38889	2025-06-15	2024-01-29	3.25	2.64	—	3.2	0.007	1.17	0.0	0.06	11.37	0.01	2.299	4.87	0.11	11.1	88.3	0.6	-5.56	0.67	0.56	1.24	3.3	0.005	0.96	1.0	0.05	15.05	0.00	2.183	10.98	1.35	10.0	89.6	0.4	-1.67	1.90	0.76	0.75	1.92	16793	2017	3	0	0	0	0	logfile
✘	8VUQ	43536	2025-01-15	2024-01-29	3.85	4.17	3.94	4.1	0.003	0.62	0.0	0.04	17.33	0.01	2.133	8.08	0.66	12.1	87.5	0.4	-1.68	0.71	0.83	1.47	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8657	1161	4	0	0	0	0	logfile
✔	8Y3V	38900	2024-12-27	2024-01-29	3.46	3.65	2.37	3.7	0.006	0.73	0.0	0.05	12.74	0.01	2.342	6.61	0.00	11.1	88.9	0.0	-2.06	0.48	0.85	4.09	3.7	0.004	0.65	0.0	0.05	15.02	0.00	2.567	4.89	1.46	8.5	91.5	0.0	-0.71	0.31	0.46	0.84	3.22	3785	513	4	0	0	0	0	logfile
✔	8Y3R	38896	2025-06-14	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.005	0.93	3.0	0.08	15.75	0.01	2.219	7.00	3.94	4.1	95.7	0.2	-0.82	0.60	0.71	0.75	1.81	15735	2001	9	0	0	0	0	logfile
✔	8Y3R	38896	2024-10-13	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.006	0.90	2.0	0.05	15.86	0.01	2.207	7.75	3.01	4.7	95.2	0.1	-0.90	0.62	0.72	0.76	1.88	15735	2001	9	0	0	0	0	logfile
✔	8Y3R	38896	2024-11-18	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.006	0.90	2.0	0.05	15.86	0.01	2.207	7.75	3.01	4.7	95.2	0.1	-0.90	0.62	0.72	0.76	1.88	15735	2001	9	0	0	0	0	logfile
✔	8Y3R	38896	2025-01-20	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.005	0.91	3.0	0.06	15.72	0.01	2.067	7.30	3.36	4.2	95.7	0.2	-0.81	0.60	0.71	0.75	1.92	15735	2001	9	0	0	0	0	logfile
✔	8Y3R	38896	2024-12-31	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.006	0.90	2.0	0.05	15.86	0.01	2.207	7.75	3.01	4.7	95.2	0.1	-0.90	0.62	0.72	0.76	1.88	15735	2001	9	0	0	0	0	logfile
✘	8VUW	43542	2025-01-18	2024-01-29	3.19	2.92	3.07	3.0	0.007	0.98	0.0	0.06	17.62	0.00	2.280	7.02	0.36	4.5	95.5	0.0	-1.89	0.66	0.80	4.06	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13055	1560	10	0	5	0	0	logfile
✔	8VUW	43542	2024-02-15	2024-01-29	3.19	2.92	3.07	3.0	0.007	0.98	0.0	0.06	17.62	0.00	2.280	7.02	0.36	4.5	95.5	0.0	-1.89	0.66	0.80	4.06	3.0	0.003	0.52	0.0	0.04	16.49	0.00	2.153	8.86	1.43	3.3	96.7	0.0	-0.70	0.31	0.65	0.82	3.30	13055	1560	10	0	5	0	0	logfile
✔	8VUW	43542	2025-06-11	2024-01-29	3.19	2.92	3.06	3.0	0.007	0.98	0.0	0.06	17.62	0.00	2.280	7.02	0.36	4.5	95.5	0.0	-1.89	0.66	0.80	4.06	3.0	0.003	0.56	0.0	0.04	16.54	0.00	2.590	7.40	0.93	3.4	96.6	0.0	-0.63	0.35	0.65	0.82	3.08	13055	1560	10	0	5	0	0	logfile
✔	8VUW	43542	2025-07-30	2024-01-29	3.19	2.92	3.06	3.0	0.007	0.98	0.0	0.06	17.62	0.00	2.280	7.02	0.36	4.5	95.5	0.0	-1.89	0.66	0.80	4.06	3.0	0.003	0.56	0.0	0.04	16.54	0.00	2.590	7.40	0.93	3.4	96.6	0.0	-0.63	0.35	0.65	0.82	3.08	13055	1560	10	0	5	0	0	logfile
✔	8VUW	43542	2024-10-12	2024-01-29	3.19	2.92	3.07	3.0	0.007	0.98	0.0	0.06	17.62	0.00	2.280	7.02	0.36	4.5	95.5	0.0	-1.89	0.66	0.80	4.06	3.0	0.003	0.57	0.0	0.04	16.53	0.00	2.591	7.13	1.15	4.1	95.9	0.0	-0.57	0.35	0.65	0.82	3.18	13055	1560	10	0	5	0	0	logfile

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