Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y01	38800	2025-04-29	2024-01-21	2.48	3.45	2.57	3.2	0.013	1.36	7.0	0.10	11.41	0.01	1.998	12.18	2.63	4.3	95.5	0.2	-1.61	0.69	0.83	4.25	3.2	0.005	0.69	0.0	0.04	15.01	0.00	2.528	7.63	2.52	3.4	96.6	0.0	0.45	0.61	0.67	0.83	3.81	8705	1133	6	0	1	0	0	logfile
✔	8Y01	38800	2025-05-12	2024-01-21	2.48	3.45	2.57	3.2	0.013	1.36	7.0	0.10	11.41	0.01	1.998	12.18	2.63	4.3	95.5	0.2	-1.61	0.69	0.83	4.25	3.2	0.006	0.71	0.0	0.04	14.97	0.00	2.511	8.39	3.17	3.8	96.2	0.0	0.37	0.60	0.68	0.83	3.88	8705	1133	6	0	1	0	0	logfile
✔	8XZG	38795	2024-12-27	2024-01-21	3.2	3.59	3.31	3.6	0.008	0.88	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.003	0.57	0.0	0.04	15.96	0.00	2.428	4.14	2.85	2.9	97.1	0.0	0.14	0.43	0.57	0.76	1.51	7172	919	5	0	0	0	0	logfile
✔	8XZG	38795	2024-11-14	2024-01-21	3.2	3.59	3.31	3.6	0.008	0.88	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.003	0.57	0.0	0.04	15.96	0.00	2.428	4.14	2.85	2.9	97.1	0.0	0.14	0.43	0.57	0.76	1.51	7172	919	5	0	0	0	0	logfile
✘	8XZG	38795	2025-02-12	2024-01-21	3.2	3.59	3.31	3.6	0.008	0.88	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7172	919	5	0	0	0	0	logfile
✔	8XZG	38795	2024-10-10	2024-01-21	3.2	3.59	3.31	3.6	0.008	0.88	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.003	0.57	0.0	0.04	15.96	0.00	2.428	4.14	2.85	2.9	97.1	0.0	0.14	0.43	0.57	0.76	1.51	7172	919	5	0	0	0	0	logfile
✔	8XZG	38795	2025-07-25	2024-01-21	3.2	3.59	3.31	3.6	0.008	1.02	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.004	0.60	0.0	0.04	15.87	0.00	2.524	4.42	2.46	3.4	96.6	0.0	-0.02	0.43	0.56	0.75	1.53	7172	919	5	0	0	0	0	logfile
✘	8XZG	38795	2025-01-14	2024-01-21	3.2	3.59	3.31	3.6	0.008	0.88	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7172	919	5	0	0	0	0	logfile
✔	8XZG	38795	2025-03-12	2024-01-21	3.2	3.59	3.31	3.6	0.008	0.88	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.004	0.60	0.0	0.04	15.87	0.00	2.524	4.42	2.46	3.4	96.6	0.0	-0.02	0.43	0.56	0.75	1.53	7172	919	5	0	0	0	0	logfile
✔	8XZG	38795	2025-06-06	2024-01-21	3.2	3.59	3.31	3.6	0.008	1.02	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.004	0.60	0.0	0.04	15.87	0.00	2.524	4.42	2.46	3.4	96.6	0.0	-0.02	0.43	0.56	0.75	1.53	7172	919	5	0	0	0	0	logfile
✔	8XZG	38795	2025-04-28	2024-01-21	3.2	3.59	3.31	3.6	0.008	1.02	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	3.6	0.004	0.60	0.0	0.04	15.87	0.00	2.524	4.42	2.46	3.4	96.6	0.0	-0.02	0.43	0.56	0.75	1.53	7172	919	5	0	0	0	0	logfile
✔	8Y02	38801	2025-07-25	2024-01-21	2.61	2.97	2.75	3.0	0.016	1.66	12.0	0.11	14.40	0.02	2.184	7.98	8.33	5.2	94.6	0.2	-2.34	0.63	0.85	4.18	3.0	0.003	0.60	0.0	0.04	15.30	0.00	2.601	6.11	2.46	2.2	97.8	0.0	0.48	2.72	0.57	0.84	3.69	8156	1069	6	0	1	0	0	logfile
✔	8XZF	38794	2025-04-29	2024-01-21	3.0	2.18	—	2.9	0.007	0.72	1.0	0.05	12.98	0.00	2.091	9.31	0.51	4.3	95.5	0.2	-2.36	0.79	0.81	4.27	2.9	0.003	0.58	0.0	0.04	15.96	0.00	2.462	6.80	2.45	3.9	96.0	0.1	0.50	1.07	0.80	0.83	3.19	9062	1161	7	0	1	0	0	logfile
✘	8XZG	38795	2025-05-10	2024-01-21	3.2	3.59	3.31	3.6	0.008	1.02	0.0	0.06	14.04	0.00	2.173	9.19	1.56	6.1	93.8	0.1	-2.72	0.62	0.77	2.19	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7172	919	5	0	0	0	0	logfile
✔	8XZH	38796	2024-12-28	2024-01-21	2.6	2.02	—	1.6	0.012	0.97	0.0	0.07	13.62	0.01	2.171	7.47	0.61	4.3	95.6	0.1	-1.34	0.77	0.83	5.30	1.8	0.003	0.58	0.0	0.04	16.37	0.00	2.457	5.52	2.24	2.5	97.5	0.0	1.14	0.48	0.77	0.85	4.08	9048	1159	6	0	0	0	0	logfile
✔	8XZH	38796	2024-11-15	2024-01-21	2.6	2.02	—	1.6	0.012	0.97	0.0	0.07	13.62	0.01	2.171	7.47	0.61	4.3	95.6	0.1	-1.34	0.77	0.83	5.30	1.8	0.003	0.58	0.0	0.04	16.37	0.00	2.457	5.52	2.24	2.5	97.5	0.0	1.14	0.48	0.77	0.85	4.08	9048	1159	6	0	0	0	0	logfile
✔	8XZH	38796	2024-10-11	2024-01-21	2.6	2.02	—	1.6	0.012	0.97	0.0	0.07	13.62	0.01	2.171	7.47	0.61	4.3	95.6	0.1	-1.34	0.77	0.83	5.30	1.8	0.003	0.58	0.0	0.04	16.37	0.00	2.457	5.52	2.24	2.5	97.5	0.0	1.14	0.48	0.77	0.85	4.08	9048	1159	6	0	0	0	0	logfile
✔	8XZH	38796	2025-07-26	2024-01-21	2.6	2.02	—	1.6	0.012	0.97	0.0	0.07	13.62	0.01	2.171	7.47	0.61	4.2	95.7	0.1	-1.34	0.77	0.83	5.30	1.8	0.003	0.56	0.0	0.04	16.34	0.00	2.497	5.41	2.14	2.1	97.9	0.0	1.11	0.94	0.77	0.84	3.98	9048	1159	6	0	0	0	0	logfile
✔	8XZH	38796	2025-06-07	2024-01-21	2.6	2.02	—	1.6	0.012	0.97	0.0	0.07	13.62	0.01	2.171	7.47	0.61	4.2	95.7	0.1	-1.34	0.77	0.83	5.30	1.8	0.003	0.56	0.0	0.04	16.34	0.00	2.497	5.41	2.14	2.1	97.9	0.0	1.11	0.94	0.77	0.84	3.98	9048	1159	6	0	0	0	0	logfile
✔	8XZH	38796	2025-05-12	2024-01-21	2.6	2.02	—	1.6	0.012	0.97	0.0	0.07	13.62	0.01	2.171	7.47	0.61	4.2	95.7	0.1	-1.34	0.77	0.83	5.30	1.8	0.004	0.61	0.0	0.04	16.43	0.00	2.475	5.74	2.65	2.3	97.7	0.0	1.04	0.45	0.78	0.85	4.07	9048	1159	6	0	0	0	0	logfile

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