Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y01	38800	2025-05-12	2024-01-21	2.48	3.45	2.57	3.2	0.013	1.36	7.0	0.10	11.41	0.01	1.998	12.18	2.63	4.3	95.5	0.2	-1.61	0.69	0.83	4.25	3.2	0.006	0.71	0.0	0.04	14.97	0.00	2.511	8.39	3.17	3.8	96.2	0.0	0.37	0.60	0.68	0.83	3.88	8705	1133	6	0	1	0	0	logfile
✔	8XZA	38791	2024-12-27	2024-01-21	4.07	4.37	3.89	4.2	0.007	1.10	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.005	0.86	0.0	0.05	14.42	0.01	2.348	23.08	0.00	6.1	93.8	0.1	-1.13	1.33	0.73	0.75	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-07-24	2024-01-21	4.07	4.37	3.86	4.2	0.007	1.11	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.006	0.83	0.0	0.05	14.07	0.00	2.375	19.41	0.14	5.7	94.1	0.1	-0.99	1.31	0.72	0.75	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-06-05	2024-01-21	4.07	4.37	3.86	4.2	0.007	1.11	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.006	0.83	0.0	0.05	14.07	0.00	2.375	19.41	0.14	5.7	94.1	0.1	-0.99	1.31	0.72	0.75	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-05-10	2024-01-21	4.07	4.37	3.86	4.2	0.007	1.11	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.007	0.81	0.0	0.05	14.24	0.00	2.402	18.63	0.00	5.3	94.5	0.1	-0.97	1.65	0.72	0.74	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-04-27	2024-01-21	4.07	4.37	3.86	4.2	0.007	1.11	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.006	0.83	0.0	0.05	14.07	0.00	2.375	19.41	0.14	5.7	94.1	0.1	-0.99	1.31	0.72	0.75	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-03-11	2024-01-21	4.07	4.37	3.86	4.2	0.007	1.10	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.003	0.79	0.0	0.05	14.10	0.00	2.362	16.53	0.00	5.5	94.4	0.1	-0.88	1.30	0.72	0.74	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-02-11	2024-01-21	4.07	4.37	3.89	4.2	0.007	1.10	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.003	0.78	0.0	0.05	14.07	0.00	2.396	17.54	0.00	5.2	94.7	0.1	-0.94	1.30	0.72	0.74	—	6565	790	4	0	9	0	0	logfile
✔	8XZA	38791	2025-01-14	2024-01-21	4.07	4.37	3.89	4.2	0.007	1.10	1.0	0.06	16.31	0.01	1.212	30.95	0.14	8.0	91.1	0.9	-1.65	0.71	0.72	—	4.2	0.003	0.78	0.0	0.05	14.07	0.00	2.396	17.54	0.00	5.2	94.7	0.1	-0.94	1.30	0.72	0.74	—	6565	790	4	0	9	0	0	logfile
✔	8XZV	38799	2025-01-18	2024-01-21	3.16	3.46	3.38	3.4	0.003	0.72	1.0	0.05	17.68	0.01	2.149	14.42	1.48	10.9	88.2	0.9	-2.26	0.67	0.78	1.63	3.4	0.005	0.71	1.0	0.05	17.98	0.01	1.911	12.01	3.55	11.8	87.7	0.5	-2.00	0.35	0.65	0.78	1.60	58999	7497	20	0	1	0	0	logfile
✘	8XZV	38799	2024-12-29	2024-01-21	3.16	3.46	3.38	3.4	0.003	0.72	1.0	0.05	17.68	0.01	2.149	14.42	1.48	10.9	88.2	0.9	-2.26	0.67	0.78	1.63	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	58999	7497	20	0	1	0	0	logfile
✔	8XYo	38779	2025-07-24	2024-01-20	3.04	2.30	3.00	2.0	0.005	0.61	0.0	0.04	13.69	0.00	2.097	6.03	0.00	3.5	96.5	0.0	0.35	0.79	0.82	3.95	2.1	0.004	0.58	0.0	0.04	15.88	0.00	2.351	4.75	1.62	3.3	96.7	0.0	0.98	0.93	0.78	0.82	3.56	6369	771	4	0	8	0	0	logfile
✔	8XYo	38779	2025-05-10	2024-01-20	3.04	2.30	3.00	2.0	0.005	0.61	0.0	0.04	13.69	0.00	2.097	6.03	0.00	3.5	96.5	0.0	0.35	0.79	0.82	3.95	2.0	0.003	0.55	0.0	0.04	15.85	0.00	2.339	5.15	2.51	3.1	96.9	0.0	0.91	0.94	0.78	0.82	3.33	6369	771	4	0	8	0	0	logfile
✔	8XYo	38779	2025-04-27	2024-01-20	3.04	2.30	3.00	2.0	0.005	0.61	0.0	0.04	13.69	0.00	2.097	6.03	0.00	3.5	96.5	0.0	0.35	0.79	0.82	3.95	2.1	0.004	0.58	0.0	0.04	15.88	0.00	2.351	4.75	1.62	3.3	96.7	0.0	0.98	0.93	0.78	0.82	3.56	6369	771	4	0	8	0	0	logfile
✔	8XYM	38778	2025-06-22	2024-01-20	2.74	3.67	2.87	3.3	0.004	0.62	0.0	0.05	12.49	0.01	2.197	4.07	0.00	7.0	93.0	0.0	-1.06	0.87	0.88	3.84	3.3	0.003	0.58	0.0	0.04	13.60	0.00	2.485	2.90	0.99	7.0	93.0	0.0	-0.69	0.31	0.86	0.87	3.51	25979	3236	11	0	49	0	0	logfile
✔	8XYM	38778	2025-05-25	2024-01-20	2.74	3.67	2.87	3.3	0.004	0.62	0.0	0.05	12.49	0.01	2.197	4.07	0.00	7.0	93.0	0.0	-1.06	0.87	0.88	3.84	3.3	0.004	0.61	0.0	0.04	13.56	0.00	2.504	2.77	0.99	7.3	92.7	0.0	-0.78	0.30	0.86	0.88	3.64	25979	3236	11	0	49	0	0	logfile
✔	8XYo	38779	2025-02-11	2024-01-20	3.04	2.30	3.00	2.0	0.004	0.59	0.0	0.04	13.69	0.00	2.097	6.03	0.00	3.5	96.5	0.0	0.35	0.79	0.82	3.95	2.1	0.005	0.61	0.0	0.04	15.93	0.00	2.361	4.67	2.51	3.3	96.7	0.0	0.65	0.93	0.78	0.82	3.72	6369	771	4	0	8	0	0	logfile
✔	8XYo	38779	2025-03-11	2024-01-20	3.04	2.30	3.00	2.0	0.004	0.59	0.0	0.04	13.69	0.00	2.097	6.03	0.00	3.5	96.5	0.0	0.35	0.79	0.82	3.95	2.1	0.003	0.57	0.0	0.04	15.84	0.00	2.350	4.67	1.92	3.0	97.0	0.0	0.84	0.94	0.78	0.82	3.53	6369	771	4	0	8	0	0	logfile
✔	8XYo	38779	2025-06-05	2024-01-20	3.04	2.30	3.00	2.0	0.005	0.61	0.0	0.04	13.69	0.00	2.097	6.03	0.00	3.5	96.5	0.0	0.35	0.79	0.82	3.95	2.1	0.004	0.58	0.0	0.04	15.88	0.00	2.351	4.75	1.62	3.3	96.7	0.0	0.98	0.93	0.78	0.82	3.56	6369	771	4	0	8	0	0	logfile
✔	8XYZ	38784	2024-10-11	2024-01-20	2.96	2.61	3.07	2.2	0.006	1.02	2.0	0.07	19.01	0.01	2.056	12.35	1.86	1.9	97.8	0.3	0.97	0.81	0.78	2.79	2.4	0.003	0.64	0.0	0.04	19.27	0.00	2.069	5.74	3.01	3.0	97.0	0.0	1.26	0.86	0.80	0.84	2.81	6429	791	3	0	1	0	0	logfile

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