Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XR9	38599	2025-06-10	2024-01-06	2.6	2.25	2.62	2.0	0.004	1.04	0.0	0.05	19.54	0.00	2.141	5.44	4.02	3.3	96.7	0.0	-0.38	0.83	0.85	3.40	2.0	0.003	0.57	0.0	0.04	18.40	0.00	2.314	4.08	4.32	3.3	96.7	0.0	0.05	0.89	0.83	0.85	3.29	11989	1469	9	0	23	0	0	logfile
✔	8XRA	38600	2025-07-30	2024-01-06	2.31	2.16	2.34	2.3	0.004	0.72	0.0	0.06	20.28	0.00	2.243	5.11	3.40	2.9	96.9	0.2	0.04	0.74	0.68	1.33	2.0	0.005	0.75	0.0	0.05	18.79	0.00	2.382	4.59	3.47	3.1	96.8	0.1	0.22	1.38	0.86	0.86	3.50	11881	1470	8	0	14	0	0	logfile
✔	8XRA	38600	2025-06-10	2024-01-06	2.31	2.16	2.34	2.3	0.004	0.72	0.0	0.06	20.28	0.00	2.243	5.11	3.40	2.9	96.9	0.2	0.04	0.74	0.68	1.33	2.0	0.005	0.75	0.0	0.05	18.79	0.00	2.382	4.59	3.47	3.1	96.8	0.1	0.22	1.38	0.86	0.86	3.50	11881	1470	8	0	14	0	0	logfile
✔	8XR9	38599	2025-07-30	2024-01-06	2.6	2.25	2.62	2.0	0.004	1.04	0.0	0.05	19.54	0.00	2.141	5.44	4.02	3.3	96.7	0.0	-0.38	0.83	0.85	3.40	2.0	0.003	0.57	0.0	0.04	18.40	0.00	2.314	4.08	4.32	3.3	96.7	0.0	0.05	0.89	0.83	0.85	3.29	11989	1469	9	0	23	0	0	logfile
✔	8XRA	38600	2025-05-14	2024-01-06	2.31	2.16	2.34	2.3	0.004	0.72	0.0	0.06	20.28	0.00	2.243	5.11	3.40	2.9	96.9	0.2	0.04	0.74	0.68	1.33	2.0	0.004	0.70	0.0	0.04	18.78	0.00	2.416	4.55	3.32	3.2	96.6	0.1	0.35	1.38	0.85	0.85	3.71	11881	1470	8	0	14	0	0	logfile
✔	8VJ9	43277	2025-05-13	2024-01-06	3.3	3.54	3.30	3.5	0.006	0.77	0.0	0.05	12.79	0.00	1.957	18.74	7.87	10.7	89.3	0.0	-2.26	0.58	0.57	2.01	3.5	0.003	0.60	0.0	0.04	14.82	0.00	2.421	9.46	4.82	7.7	92.3	0.0	-1.69	3.29	0.58	0.58	1.66	10983	705	4	0	0	0	5472	logfile
✔	8VJi	43282	2025-05-24	2024-01-06	3.3	3.63	3.32	3.5	0.009	0.82	0.0	0.05	15.45	0.01	2.018	9.96	1.59	5.7	94.2	0.0	-1.52	0.47	0.84	3.59	3.5	0.007	0.78	0.0	0.05	16.95	0.00	2.423	10.81	3.75	5.2	94.8	0.0	-1.07	1.20	0.47	0.84	2.87	25727	3318	14	0	0	0	0	logfile
✔	8VJi	43282	2025-06-22	2024-01-06	3.3	3.63	3.32	3.5	0.009	0.82	0.0	0.05	15.45	0.01	2.018	9.96	1.59	5.7	94.2	0.0	-1.52	0.47	0.84	3.59	3.5	0.003	0.69	0.0	0.04	16.78	0.00	2.364	8.65	3.18	3.0	97.0	0.0	-0.73	1.21	0.46	0.84	2.70	25727	3318	14	0	0	0	0	logfile
✔	8XRB	38601	2025-06-10	2024-01-06	2.49	2.20	2.53	1.9	0.003	0.58	0.0	0.04	19.64	0.00	2.189	5.48	4.62	4.0	96.0	0.0	0.03	0.84	0.85	2.73	1.9	0.004	0.63	0.0	0.04	19.18	0.00	2.509	3.72	4.55	3.4	96.6	0.0	0.18	0.25	0.84	0.85	2.98	11904	1482	9	0	13	0	0	logfile
✔	8XR7	38597	2025-06-10	2024-01-06	2.62	2.28	2.63	2.1	0.005	0.61	0.0	0.04	19.42	0.00	2.229	5.26	4.66	3.8	96.2	0.0	-0.42	0.83	0.85	3.14	2.1	0.004	0.62	0.0	0.04	18.83	0.00	2.440	4.01	3.73	2.9	97.1	0.0	-0.01	0.31	0.83	0.85	2.98	11812	1464	6	0	11	0	0	logfile
✔	8XR7	38597	2025-07-29	2024-01-06	2.62	2.28	2.63	2.1	0.005	0.61	0.0	0.04	19.42	0.00	2.229	5.26	4.66	3.8	96.2	0.0	-0.42	0.83	0.85	3.14	2.1	0.004	0.62	0.0	0.04	18.83	0.00	2.440	4.01	3.73	2.9	97.1	0.0	-0.01	0.31	0.83	0.85	2.98	11812	1464	6	0	11	0	0	logfile
✔	8XR8	38598	2025-07-30	2024-01-06	2.53	2.21	2.62	1.9	0.005	0.83	0.0	0.05	20.79	0.00	2.208	7.55	5.92	4.0	96.0	0.0	-0.58	0.83	0.84	3.07	1.9	0.005	0.91	1.0	0.05	19.24	0.00	2.338	6.69	4.99	4.1	95.9	0.0	-0.39	0.25	0.83	0.84	3.01	11809	1458	11	0	18	0	0	logfile
✔	8XR8	38598	2025-06-10	2024-01-06	2.53	2.21	2.62	1.9	0.005	0.83	0.0	0.05	20.79	0.00	2.208	7.55	5.92	4.0	96.0	0.0	-0.58	0.83	0.84	3.07	1.9	0.005	0.91	1.0	0.05	19.24	0.00	2.338	6.69	4.99	4.1	95.9	0.0	-0.39	0.25	0.83	0.84	3.01	11809	1458	11	0	18	0	0	logfile
✔	8XR8	38598	2025-05-14	2024-01-06	2.53	2.21	2.62	1.9	0.005	0.83	0.0	0.05	20.79	0.00	2.208	7.55	5.92	4.0	96.0	0.0	-0.58	0.83	0.84	3.07	1.9	0.003	0.64	0.0	0.04	19.10	0.00	2.419	5.39	4.29	3.4	96.6	0.0	-0.34	0.26	0.83	0.84	2.94	11809	1458	11	0	18	0	0	logfile
✔	8XRB	38601	2025-05-14	2024-01-06	2.49	2.20	2.53	1.9	0.003	0.58	0.0	0.04	19.64	0.00	2.189	5.48	4.62	4.0	96.0	0.0	0.03	0.84	0.85	2.73	1.9	0.004	0.63	0.0	0.04	19.10	0.00	2.421	4.11	4.31	3.4	96.6	0.0	0.18	0.26	0.84	0.85	3.03	11904	1482	9	0	13	0	0	logfile
✔	8XRB	38601	2025-07-30	2024-01-06	2.49	2.20	2.53	1.9	0.003	0.58	0.0	0.04	19.64	0.00	2.189	5.48	4.62	4.0	96.0	0.0	0.03	0.84	0.85	2.73	1.9	0.004	0.63	0.0	0.04	19.18	0.00	2.509	3.72	4.55	3.4	96.6	0.0	0.18	0.25	0.84	0.85	2.98	11904	1482	9	0	13	0	0	logfile
✔	8XR7	38597	2025-05-14	2024-01-06	2.62	2.28	2.63	2.1	0.005	0.61	0.0	0.04	19.42	0.00	2.229	5.26	4.66	3.8	96.2	0.0	-0.42	0.83	0.85	3.14	2.1	0.004	0.62	0.0	0.04	18.93	0.00	2.429	4.18	3.96	3.0	97.0	0.0	-0.20	0.28	0.83	0.85	3.09	11812	1464	6	0	11	0	0	logfile
✔	8VJC	43280	2024-12-31	2024-01-06	3.8	4.21	3.77	3.9	0.003	0.65	0.0	0.05	15.46	0.00	2.157	15.56	0.51	8.2	91.6	0.2	-1.46	0.85	0.80	1.76	3.9	0.005	0.68	0.0	0.05	16.21	0.00	2.429	11.55	2.75	8.5	91.3	0.2	-1.58	0.36	0.85	0.82	1.85	13927	1726	5	0	0	0	0	logfile
✔	8VJC	43280	2024-11-18	2024-01-06	3.8	4.21	3.77	3.9	0.003	0.65	0.0	0.05	15.46	0.00	2.157	15.56	0.51	8.2	91.6	0.2	-1.46	0.85	0.80	1.76	3.9	0.005	0.68	0.0	0.05	16.21	0.00	2.429	11.55	2.75	8.5	91.3	0.2	-1.58	0.36	0.85	0.82	1.85	13927	1726	5	0	0	0	0	logfile
✔	8VJC	43280	2024-10-14	2024-01-06	3.8	4.21	3.77	3.9	0.003	0.65	0.0	0.05	15.46	0.00	2.157	15.56	0.51	8.2	91.6	0.2	-1.46	0.85	0.80	1.76	3.9	0.005	0.68	0.0	0.05	16.21	0.00	2.429	11.55	2.75	8.5	91.3	0.2	-1.58	0.36	0.85	0.82	1.85	13927	1726	5	0	0	0	0	logfile

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