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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8XQT | 38588 | 2025-03-13 | 2024-01-05 | 2.94 | 2.26 | 3.08 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 16.15 | 0.00 | 2.360 | 11.96 | 3.49 | 2.7 | 97.3 | 0.0 | 0.01 | 1.10 | 0.76 | 0.77 | 2.16 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2025-04-29 | 2024-01-05 | 2.94 | 2.26 | 3.08 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 16.12 | 0.00 | 2.357 | 10.67 | 3.80 | 2.6 | 97.4 | 0.0 | 0.19 | 1.10 | 0.76 | 0.76 | 2.06 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2025-05-12 | 2024-01-05 | 2.94 | 2.26 | 3.08 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.004 | 0.63 | 0.0 | 0.04 | 16.10 | 0.00 | 2.369 | 10.90 | 3.80 | 2.7 | 97.3 | 0.0 | 0.11 | 1.11 | 0.76 | 0.76 | 2.04 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2025-06-07 | 2024-01-05 | 2.94 | 2.26 | 3.08 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 16.12 | 0.00 | 2.357 | 10.67 | 3.80 | 2.6 | 97.4 | 0.0 | 0.19 | 1.10 | 0.76 | 0.76 | 2.06 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2025-07-26 | 2024-01-05 | 2.94 | 2.26 | 3.08 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 16.12 | 0.00 | 2.357 | 10.67 | 3.80 | 2.6 | 97.4 | 0.0 | 0.19 | 1.10 | 0.76 | 0.76 | 2.06 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2024-10-11 | 2024-01-05 | 2.94 | 2.26 | 3.07 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.13 | 0.00 | 2.511 | 10.95 | 3.08 | 2.8 | 97.2 | 0.0 | 0.25 | 1.52 | 0.76 | 0.76 | 2.12 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2024-11-15 | 2024-01-05 | 2.94 | 2.26 | 3.07 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.13 | 0.00 | 2.511 | 10.95 | 3.08 | 2.8 | 97.2 | 0.0 | 0.25 | 1.52 | 0.76 | 0.76 | 2.12 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQT | 38588 | 2024-12-28 | 2024-01-05 | 2.94 | 2.26 | 3.07 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.34 | 0.00 | 2.168 | 16.18 | 0.21 | 3.1 | 96.9 | 0.0 | 0.33 | 0.74 | 0.74 | 2.16 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.13 | 0.00 | 2.511 | 10.95 | 3.08 | 2.8 | 97.2 | 0.0 | 0.25 | 1.52 | 0.76 | 0.76 | 2.12 | 8897 | 1125 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8XQE | 38574 | 2025-05-14 | 2024-01-05 | 3.48 | 2.31 | 3.68 | 1.9 | 0.003 | 0.75 | 0.0 | 0.04 | 16.12 | 0.00 | 2.128 | 20.23 | 0.00 | 6.1 | 93.9 | 0.0 | -1.58 | 0.69 | 0.64 | 1.27 | 1.8 | 0.004 | 0.99 | 0.0 | 0.04 | 17.13 | 0.00 | 2.201 | 18.02 | 4.28 | 5.5 | 94.5 | 0.0 | -1.21 | 0.55 | 0.71 | 0.67 | 0.91 | 11348 | 1442 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XQE | 38574 | 2025-06-10 | 2024-01-05 | 3.48 | 2.31 | 3.68 | 1.9 | 0.003 | 0.75 | 0.0 | 0.04 | 16.12 | 0.00 | 2.128 | 20.23 | 0.00 | 6.1 | 93.9 | 0.0 | -1.58 | 0.69 | 0.64 | 1.27 | 1.9 | 0.003 | 0.74 | 0.0 | 0.04 | 17.10 | 0.00 | 2.507 | 14.65 | 3.63 | 5.6 | 94.4 | 0.0 | -1.13 | 0.53 | 0.71 | 0.67 | 0.71 | 11348 | 1442 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XQE | 38574 | 2025-07-29 | 2024-01-05 | 3.48 | 2.31 | 3.68 | 1.9 | 0.003 | 0.75 | 0.0 | 0.04 | 16.12 | 0.00 | 2.128 | 20.23 | 0.00 | 6.1 | 93.9 | 0.0 | -1.58 | 0.69 | 0.64 | 1.27 | 1.9 | 0.003 | 0.74 | 0.0 | 0.04 | 17.10 | 0.00 | 2.507 | 14.65 | 3.63 | 5.6 | 94.4 | 0.0 | -1.13 | 0.53 | 0.71 | 0.67 | 0.71 | 11348 | 1442 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ViZ | 43274 | 2025-05-22 | 2024-01-05 | 2.63 | 3.43 | — | 3.0 | 0.007 | 1.05 | 2.0 | 0.06 | 13.27 | 0.01 | 2.286 | 1.80 | 0.08 | 2.9 | 97.1 | 0.0 | -1.70 | 0.88 | 0.91 | 3.65 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.234 | 4.25 | 0.73 | 2.5 | 97.5 | 0.0 | 1.03 | 0.35 | 0.88 | 0.91 | 3.10 | 23274 | 2955 | 14 | 0 | 20 | 0 | 0 | logfile |
✔ | 8ViZ | 43274 | 2025-06-20 | 2024-01-05 | 2.63 | 3.43 | — | 3.0 | 0.007 | 1.05 | 2.0 | 0.06 | 13.27 | 0.01 | 2.286 | 1.80 | 0.08 | 2.9 | 97.1 | 0.0 | -1.70 | 0.88 | 0.91 | 3.65 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 14.53 | 0.00 | 2.248 | 3.97 | 0.77 | 2.5 | 97.5 | 0.0 | 1.13 | 0.35 | 0.88 | 0.91 | 2.97 | 23274 | 2955 | 14 | 0 | 20 | 0 | 0 | logfile |
✔ | 8ViZ | 43274 | 2025-01-25 | 2024-01-05 | 2.63 | 3.43 | — | 3.0 | 0.007 | 1.05 | 2.0 | 0.06 | 13.27 | 0.01 | 2.286 | 1.80 | 0.08 | 2.9 | 97.1 | 0.0 | -1.70 | 0.88 | 0.91 | 3.65 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.234 | 4.25 | 0.73 | 2.5 | 97.5 | 0.0 | 1.03 | 0.35 | 0.88 | 0.91 | 3.10 | 23274 | 2955 | 14 | 0 | 20 | 0 | 0 | logfile |
✔ | 8XQL | 38580 | 2025-01-15 | 2024-01-05 | 2.99 | 2.28 | 3.05 | 2.0 | 0.005 | 0.63 | 0.0 | 0.04 | 15.56 | 0.00 | 2.156 | 14.24 | 0.00 | 4.2 | 95.7 | 0.1 | 0.98 | 0.78 | 0.78 | 2.64 | 2.0 | 0.005 | 0.67 | 0.0 | 0.04 | 16.46 | 0.00 | 2.494 | 10.65 | 2.98 | 3.9 | 96.0 | 0.1 | 0.89 | 1.09 | 0.77 | 0.79 | 2.38 | 8368 | 1052 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8XQL | 38580 | 2025-03-12 | 2024-01-05 | 2.99 | 2.28 | 3.04 | 2.0 | 0.005 | 0.63 | 0.0 | 0.04 | 15.56 | 0.00 | 2.156 | 14.24 | 0.00 | 4.2 | 95.7 | 0.1 | 0.98 | 0.78 | 0.78 | 2.64 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.46 | 0.00 | 2.510 | 10.11 | 2.10 | 3.6 | 96.3 | 0.1 | 1.07 | 1.09 | 0.77 | 0.79 | 2.19 | 8368 | 1052 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8XQL | 38580 | 2025-02-12 | 2024-01-05 | 2.99 | 2.28 | 3.05 | 2.0 | 0.005 | 0.63 | 0.0 | 0.04 | 15.56 | 0.00 | 2.156 | 14.24 | 0.00 | 4.2 | 95.7 | 0.1 | 0.98 | 0.78 | 0.78 | 2.64 | 2.0 | 0.005 | 0.67 | 0.0 | 0.04 | 16.46 | 0.00 | 2.494 | 10.65 | 2.98 | 3.9 | 96.0 | 0.1 | 0.89 | 1.09 | 0.77 | 0.79 | 2.38 | 8368 | 1052 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8XQL | 38580 | 2024-11-15 | 2024-01-05 | 2.99 | 2.28 | 3.05 | 2.0 | 0.005 | 0.63 | 0.0 | 0.04 | 15.56 | 0.00 | 2.156 | 14.24 | 0.00 | 4.2 | 95.7 | 0.1 | 0.98 | 0.78 | 0.78 | 2.64 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 16.40 | 0.00 | 2.499 | 9.75 | 2.87 | 3.9 | 96.0 | 0.2 | 1.11 | 1.08 | 0.77 | 0.79 | 2.44 | 8368 | 1052 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8XQL | 38580 | 2024-10-10 | 2024-01-05 | 2.99 | 2.28 | 3.05 | 2.0 | 0.005 | 0.63 | 0.0 | 0.04 | 15.56 | 0.00 | 2.156 | 14.24 | 0.00 | 4.2 | 95.7 | 0.1 | 0.98 | 0.78 | 0.78 | 2.64 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 16.40 | 0.00 | 2.499 | 9.75 | 2.87 | 3.9 | 96.0 | 0.2 | 1.11 | 1.08 | 0.77 | 0.79 | 2.44 | 8368 | 1052 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8XQL | 38580 | 2025-07-26 | 2024-01-05 | 2.99 | 2.28 | 3.04 | 2.0 | 0.005 | 0.63 | 0.0 | 0.04 | 15.56 | 0.00 | 2.156 | 14.24 | 0.00 | 4.2 | 95.7 | 0.1 | 0.98 | 0.78 | 0.78 | 2.64 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.46 | 0.00 | 2.510 | 10.11 | 2.10 | 3.6 | 96.3 | 0.1 | 1.07 | 1.09 | 0.77 | 0.79 | 2.19 | 8368 | 1052 | 6 | 0 | 3 | 0 | 0 | logfile |