Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Vi3	43247	2025-02-12	2024-01-03	2.9	3.36	3.11	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.002	0.47	0.0	0.04	14.71	0.00	2.494	3.78	0.78	1.7	98.3	0.0	2.31	0.33	0.64	0.89	4.41	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2025-05-11	2024-01-03	2.9	3.36	3.06	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.002	0.47	0.0	0.04	14.71	0.00	2.494	3.78	0.78	1.7	98.3	0.0	2.31	0.33	0.64	0.89	4.41	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2025-06-06	2024-01-03	2.9	3.36	3.06	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.003	0.49	0.0	0.04	14.74	0.00	2.472	3.71	1.04	1.7	98.3	0.0	2.25	0.33	0.61	0.89	4.55	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2025-07-25	2024-01-03	2.9	3.36	3.06	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.003	0.49	0.0	0.04	14.74	0.00	2.472	3.71	1.04	1.7	98.3	0.0	2.25	0.33	0.61	0.89	4.55	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2024-10-10	2024-01-03	2.9	3.36	3.11	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.003	0.48	0.0	0.04	14.76	0.00	2.440	3.78	1.17	1.9	98.1	0.0	2.19	0.33	0.61	0.89	4.54	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2024-11-14	2024-01-03	2.9	3.36	3.11	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.003	0.48	0.0	0.04	14.76	0.00	2.440	3.78	1.17	1.9	98.1	0.0	2.19	0.33	0.61	0.89	4.54	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2025-01-14	2024-01-03	2.9	3.36	3.11	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.002	0.47	0.0	0.04	14.71	0.00	2.494	3.78	0.78	1.7	98.3	0.0	2.31	0.33	0.64	0.89	4.41	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2024-12-28	2024-01-03	2.9	3.36	3.11	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.003	0.48	0.0	0.04	14.76	0.00	2.440	3.78	1.17	1.9	98.1	0.0	2.19	0.33	0.61	0.89	4.54	7359	924	3	0	0	0	0	logfile
✔	8Vi3	43247	2025-04-28	2024-01-03	2.9	3.36	3.06	3.3	0.002	0.44	0.0	0.04	12.32	0.00	2.186	4.59	0.00	1.2	98.8	0.0	2.50	0.69	0.87	5.29	3.3	0.003	0.49	0.0	0.04	14.74	0.00	2.472	3.71	1.04	1.7	98.3	0.0	2.25	0.33	0.61	0.89	4.55	7359	924	3	0	0	0	0	logfile
✔	8XoP	38537	2025-06-17	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.004	0.83	0.0	0.04	16.28	0.01	2.277	10.00	2.75	1.9	98.1	0.0	1.69	0.97	0.86	0.89	2.70	19740	2562	28	0	14	0	0	logfile
✘	8RL6	19332	2025-07-24	2024-01-02	3.18	2.29	3.42	2.9	0.003	0.55	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6493	436	2	0	1	0	3217	logfile
✔	8XoP	38537	2025-01-23	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.004	0.84	0.0	0.04	16.26	0.00	2.294	9.82	2.27	1.6	98.4	0.0	1.69	0.98	0.86	0.89	2.73	19740	2562	28	0	14	0	0	logfile
✔	8XoP	38537	2024-10-15	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.005	0.83	0.0	0.04	16.32	0.01	2.269	10.48	2.94	2.3	97.7	0.0	1.82	1.29	0.86	0.89	2.71	19740	2562	28	0	14	0	0	logfile
✘	8RLA	19336	2025-06-07	2024-01-02	3.03	2.57	3.09	3.1	0.002	0.54	0.0	0.04	13.05	0.00	2.009	10.36	0.00	2.0	98.0	0.0	0.42	0.73	0.71	2.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8304	560	3	0	1	0	4091	logfile
✘	8XoP	38537	2024-11-19	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19740	2562	28	0	14	0	0	logfile
✔	8XoP	38537	2025-05-20	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.004	0.81	0.0	0.04	16.23	0.01	2.286	10.00	2.32	1.8	98.2	0.0	1.76	0.98	0.85	0.89	2.67	19740	2562	28	0	14	0	0	logfile
✔	8XoR	38538	2025-05-13	2024-01-02	3.0	3.68	2.91	3.3	0.005	0.90	0.0	0.06	14.20	0.01	2.242	5.41	0.33	4.3	95.7	0.0	-0.55	0.72	0.83	3.69	3.3	0.003	0.68	0.0	0.04	14.58	0.00	2.468	5.19	1.30	2.8	97.2	0.0	1.22	1.65	0.72	0.84	2.55	8979	1160	6	0	6	0	0	logfile
✔	8XoR	38538	2025-01-17	2024-01-02	3.0	3.68	2.90	3.3	0.005	0.90	0.0	0.06	14.20	0.01	2.242	5.41	0.33	4.3	95.7	0.0	-0.55	0.72	0.83	3.69	3.3	0.003	0.68	0.0	0.04	14.58	0.00	2.468	5.19	1.30	2.8	97.2	0.0	1.22	1.65	0.72	0.84	2.55	8979	1160	6	0	6	0	0	logfile
✔	8RL5	19331	2025-06-12	2024-01-02	3.79	3.17	3.84	4.1	0.002	0.45	0.0	0.04	12.74	0.00	2.293	5.29	0.00	1.9	98.1	0.0	1.26	0.74	0.63	1.37	4.0	0.005	0.98	0.0	0.04	15.09	0.00	2.177	18.93	2.70	5.3	94.7	0.0	0.44	0.96	0.76	0.68	1.32	14373	1112	6	0	2	0	6713	logfile
✔	8XoR	38538	2024-12-29	2024-01-02	3.0	3.68	2.90	3.3	0.005	0.90	0.0	0.06	14.20	0.01	2.242	5.41	0.33	4.3	95.7	0.0	-0.55	0.72	0.83	3.69	3.3	0.003	0.69	0.0	0.04	14.54	0.00	2.480	6.14	1.41	2.4	97.6	0.0	1.31	1.66	0.72	0.84	2.55	8979	1160	6	0	6	0	0	logfile

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