Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XoH	38529	2025-04-29	2024-01-01	3.2	3.06	3.21	3.2	0.003	0.56	0.0	0.04	15.16	0.00	2.215	4.05	0.21	2.6	97.4	0.0	0.74	0.60	0.81	3.13	3.2	0.003	0.58	0.0	0.04	16.65	0.00	2.483	6.28	2.71	2.0	98.0	0.0	1.03	1.18	0.56	0.80	1.95	8809	1116	5	0	0	0	0	logfile
✔	8XoH	38529	2025-03-13	2024-01-01	3.2	3.06	3.21	3.2	0.003	0.56	0.0	0.04	15.16	0.00	2.215	4.05	0.21	2.6	97.4	0.0	0.74	0.60	0.81	3.13	3.2	0.003	0.58	0.0	0.04	16.65	0.00	2.483	6.28	2.71	2.0	98.0	0.0	1.03	1.18	0.56	0.80	1.95	8809	1116	5	0	0	0	0	logfile
✔	8XoH	38529	2025-02-13	2024-01-01	3.2	3.06	3.20	3.2	0.003	0.56	0.0	0.04	15.16	0.00	2.215	4.05	0.21	2.6	97.4	0.0	0.74	0.60	0.81	3.13	3.2	0.004	0.61	0.0	0.04	16.64	0.00	2.355	6.34	2.50	2.6	97.4	0.0	0.98	1.19	0.57	0.81	2.34	8809	1116	5	0	0	0	0	logfile
✔	8XoH	38529	2025-01-15	2024-01-01	3.2	3.06	3.20	3.2	0.003	0.56	0.0	0.04	15.16	0.00	2.215	4.05	0.21	2.6	97.4	0.0	0.74	0.60	0.81	3.13	3.2	0.004	0.61	0.0	0.04	16.64	0.00	2.355	6.34	2.50	2.6	97.4	0.0	0.98	1.19	0.57	0.81	2.34	8809	1116	5	0	0	0	0	logfile
✔	8XoH	38529	2024-12-28	2024-01-01	3.2	3.06	3.20	3.2	0.003	0.56	0.0	0.04	15.16	0.00	2.215	4.05	0.21	2.6	97.4	0.0	0.74	0.60	0.81	3.13	3.2	0.003	0.61	0.0	0.04	16.50	0.00	2.467	6.51	2.71	2.2	97.8	0.0	0.91	1.21	0.56	0.80	2.14	8809	1116	5	0	0	0	0	logfile
✔	8VHF	43236	2024-12-28	2024-01-01	3.51	3.98	3.52	3.9	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.004	0.67	0.0	0.04	17.63	0.00	2.476	9.27	3.92	4.1	95.9	0.0	0.33	0.29	0.68	0.81	1.13	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2024-11-15	2024-01-01	3.51	3.98	3.52	3.9	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.004	0.67	0.0	0.04	17.63	0.00	2.476	9.27	3.92	4.1	95.9	0.0	0.33	0.29	0.68	0.81	1.13	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2025-07-26	2024-01-01	3.51	3.98	3.52	3.8	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.003	0.70	0.0	0.04	17.69	0.00	2.408	10.30	4.37	4.7	95.3	0.0	0.27	0.31	0.68	0.81	1.21	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2025-06-07	2024-01-01	3.51	3.98	3.52	3.8	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.003	0.70	0.0	0.04	17.69	0.00	2.408	10.30	4.37	4.7	95.3	0.0	0.27	0.31	0.68	0.81	1.21	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2025-05-11	2024-01-01	3.51	3.98	3.52	3.8	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.004	0.70	0.0	0.04	17.62	0.00	2.407	10.24	4.26	4.2	95.8	0.0	0.26	0.30	0.68	0.81	1.16	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2025-04-29	2024-01-01	3.51	3.98	3.52	3.8	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.003	0.70	0.0	0.04	17.69	0.00	2.408	10.30	4.37	4.7	95.3	0.0	0.27	0.31	0.68	0.81	1.21	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2025-01-15	2024-01-01	3.51	3.98	3.52	3.9	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.004	0.71	0.0	0.04	17.70	0.00	2.405	10.72	4.93	4.4	95.6	0.0	0.19	0.30	0.68	0.81	1.16	8299	1057	6	0	1	0	0	logfile
✔	8VHF	43236	2025-03-12	2024-01-01	3.51	3.98	3.52	3.8	0.004	0.82	0.0	0.04	17.72	0.00	2.237	9.63	0.34	3.7	96.3	0.0	-0.22	0.66	0.79	1.26	3.9	0.003	0.69	0.0	0.04	17.70	0.00	2.406	9.99	4.82	4.5	95.4	0.1	0.31	0.30	0.68	0.81	1.07	8299	1057	6	0	1	0	0	logfile
✘	8XoG	38528	2025-05-12	2024-01-01	2.9	3.23	3.03	3.2	0.003	0.56	0.0	0.04	14.84	0.00	2.247	3.53	0.21	2.5	97.5	0.0	0.78	0.47	0.74	3.23	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8708	1115	6	0	0	2	0	logfile
✔	8Xoo	38536	2025-01-13	2024-01-01	1.84	2.57	3.02	2.8	0.002	0.55	0.0	0.04	14.65	0.00	2.063	8.76	0.02	3.7	96.2	0.1	1.08	0.80	0.80	2.08	2.2	0.003	0.67	0.0	0.04	17.40	0.00	1.972	6.96	1.81	3.9	96.0	0.1	1.47	2.01	0.89	0.89	2.40	47229	6018	27	0	43	0	0	logfile
✔	8XoN	38535	2025-01-13	2024-01-01	1.96	2.51	3.08	2.2	0.003	0.57	0.0	0.04	14.06	0.00	2.025	7.97	0.00	4.1	95.7	0.2	0.94	0.79	0.81	2.16	2.2	0.003	0.67	0.0	0.04	17.10	0.00	2.009	6.66	2.08	4.5	95.4	0.1	1.25	0.69	0.88	0.88	2.18	47409	6044	27	0	43	0	0	logfile
✔	8Xoo	38536	2024-12-27	2024-01-01	1.84	2.57	3.02	2.8	0.002	0.55	0.0	0.04	14.65	0.00	2.063	8.76	0.02	3.7	96.2	0.1	1.08	0.80	0.80	2.08	2.2	0.003	0.68	0.0	0.04	17.47	0.00	1.976	6.55	2.01	4.2	95.7	0.1	1.27	1.84	0.89	0.89	2.43	47229	6018	27	0	43	0	0	logfile
✔	8Xoo	38536	2024-10-09	2024-01-01	1.84	2.57	3.02	2.8	0.002	0.55	0.0	0.04	14.65	0.00	2.063	8.76	0.02	3.7	96.2	0.1	1.08	0.80	0.80	2.08	2.2	0.003	0.68	0.0	0.04	17.47	0.00	1.976	6.55	2.01	4.2	95.7	0.1	1.27	1.84	0.89	0.89	2.43	47229	6018	27	0	43	0	0	logfile
✔	8XoN	38535	2024-10-09	2024-01-01	1.96	2.51	3.08	2.2	0.003	0.57	0.0	0.04	14.06	0.00	2.025	7.97	0.00	4.1	95.7	0.2	0.94	0.79	0.81	2.16	2.2	0.004	0.72	1.0	0.04	17.03	0.00	2.004	7.60	1.92	4.5	95.3	0.1	1.15	0.68	0.88	0.88	2.31	47409	6044	27	0	43	0	0	logfile
✔	8Xoo	38536	2024-11-18	2024-01-01	1.84	2.57	3.02	2.8	0.002	0.55	0.0	0.04	14.65	0.00	2.063	8.76	0.02	3.7	96.2	0.1	1.08	0.80	0.80	2.08	2.2	0.003	0.68	0.0	0.04	17.47	0.00	1.976	6.55	2.01	4.2	95.7	0.1	1.27	1.84	0.89	0.89	2.43	47229	6018	27	0	43	0	0	logfile

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