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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8RBM | 19032 | 2025-01-17 | 2023-12-04 | 3.24 | 3.96 | 3.31 | 3.8 | 0.007 | 0.91 | 0.0 | 0.23 | 19.32 | 0.00 | 2.218 | 6.53 | 2.06 | 3.2 | 96.5 | 0.3 | 0.31 | 0.76 | 0.83 | 2.56 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 13.82 | 0.00 | 2.446 | 6.75 | 1.70 | 5.3 | 94.5 | 0.2 | 1.33 | 0.51 | 0.75 | 0.88 | 2.19 | 11259 | 1425 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 8RBM | 19032 | 2025-05-13 | 2023-12-04 | 3.24 | 3.96 | 3.31 | 3.8 | 0.006 | 1.01 | 0.0 | 0.23 | 18.91 | 0.00 | 2.218 | 6.53 | 2.06 | 3.2 | 96.5 | 0.3 | 0.31 | 0.76 | 0.83 | 2.56 | 3.8 | 0.004 | 0.90 | 0.0 | 0.04 | 13.75 | 0.00 | 2.438 | 6.83 | 1.88 | 5.2 | 94.5 | 0.2 | 1.26 | 0.51 | 0.75 | 0.89 | 2.21 | 11259 | 1425 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 8RBM | 19032 | 2025-06-10 | 2023-12-04 | 3.24 | 3.96 | 3.31 | 3.8 | 0.006 | 1.01 | 0.0 | 0.23 | 18.91 | 0.00 | 2.218 | 6.53 | 2.06 | 3.2 | 96.5 | 0.3 | 0.31 | 0.76 | 0.83 | 2.56 | 3.8 | 0.004 | 0.88 | 0.0 | 0.04 | 13.70 | 0.00 | 2.439 | 7.14 | 2.14 | 5.0 | 94.8 | 0.2 | 1.37 | 0.52 | 0.75 | 0.89 | 2.27 | 11259 | 1425 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 8RBM | 19032 | 2025-07-29 | 2023-12-04 | 3.24 | 3.96 | 3.31 | 3.8 | 0.006 | 1.01 | 0.0 | 0.23 | 18.91 | 0.00 | 2.218 | 6.53 | 2.06 | 3.2 | 96.5 | 0.3 | 0.31 | 0.76 | 0.83 | 2.56 | 3.8 | 0.004 | 0.88 | 0.0 | 0.04 | 13.70 | 0.00 | 2.439 | 7.14 | 2.14 | 5.0 | 94.8 | 0.2 | 1.37 | 0.52 | 0.75 | 0.89 | 2.27 | 11259 | 1425 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 8RBM | 19032 | 2024-10-12 | 2023-12-04 | 3.24 | 3.96 | 3.31 | 3.8 | 0.007 | 0.91 | 0.0 | 0.23 | 19.32 | 0.00 | 2.218 | 6.53 | 2.06 | 3.2 | 96.5 | 0.3 | 0.31 | 0.76 | 0.83 | 2.56 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 13.82 | 0.00 | 2.440 | 7.01 | 1.88 | 5.2 | 94.5 | 0.2 | 1.38 | 0.53 | 0.75 | 0.88 | 2.18 | 11259 | 1425 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 8RB7 | 19027 | 2024-12-27 | 2023-12-03 | 3.2 | 3.80 | 3.05 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 17.94 | 0.00 | 2.317 | 8.21 | 0.32 | 2.5 | 97.5 | 0.0 | 1.87 | 2.08 | 0.28 | 0.76 | 1.70 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 8RB7 | 19027 | 2025-06-05 | 2023-12-03 | 3.2 | 3.80 | 2.40 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.60 | 0.0 | 0.04 | 17.78 | 0.01 | 2.468 | 7.70 | 0.64 | 2.5 | 97.5 | 0.0 | 1.89 | 2.07 | 0.28 | 0.77 | 1.70 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 8RB7 | 19027 | 2025-07-24 | 2023-12-03 | 3.2 | 3.80 | 2.40 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.60 | 0.0 | 0.04 | 17.78 | 0.01 | 2.468 | 7.70 | 0.64 | 2.5 | 97.5 | 0.0 | 1.89 | 2.07 | 0.28 | 0.77 | 1.70 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 8RB7 | 19027 | 2024-10-10 | 2023-12-03 | 3.2 | 3.80 | 3.05 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 17.94 | 0.00 | 2.317 | 8.21 | 0.32 | 2.5 | 97.5 | 0.0 | 1.87 | 2.08 | 0.28 | 0.76 | 1.70 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 8RB7 | 19027 | 2024-11-14 | 2023-12-03 | 3.2 | 3.80 | 3.05 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 17.94 | 0.00 | 2.317 | 8.21 | 0.32 | 2.5 | 97.5 | 0.0 | 1.87 | 2.08 | 0.28 | 0.76 | 1.70 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 8RB8 | 19028 | 2024-10-12 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 0.87 | 0.0 | 0.22 | 19.00 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 13.60 | 0.00 | 2.465 | 6.21 | 1.03 | 4.7 | 95.3 | 0.1 | 1.79 | 0.61 | 0.77 | 0.90 | 1.64 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB8 | 19028 | 2025-01-18 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 0.87 | 0.0 | 0.22 | 19.00 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 13.56 | 0.00 | 2.490 | 5.78 | 1.59 | 4.2 | 95.8 | 0.1 | 1.77 | 0.60 | 0.77 | 0.89 | 1.58 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB8 | 19028 | 2024-12-30 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 0.87 | 0.0 | 0.22 | 19.00 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 13.60 | 0.00 | 2.465 | 6.21 | 1.03 | 4.7 | 95.3 | 0.1 | 1.79 | 0.61 | 0.77 | 0.90 | 1.64 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB8 | 19028 | 2024-11-17 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 0.87 | 0.0 | 0.22 | 19.00 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 13.60 | 0.00 | 2.465 | 6.21 | 1.03 | 4.7 | 95.3 | 0.1 | 1.79 | 0.61 | 0.77 | 0.90 | 1.64 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB8 | 19028 | 2025-05-14 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 1.10 | 0.0 | 0.22 | 18.68 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.8 | 0.002 | 0.88 | 0.0 | 0.04 | 13.26 | 0.00 | 2.520 | 5.93 | 1.59 | 4.2 | 95.8 | 0.1 | 1.78 | 0.59 | 0.77 | 0.89 | 1.67 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB8 | 19028 | 2025-06-11 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 1.10 | 0.0 | 0.22 | 18.68 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.9 | 0.003 | 0.89 | 0.0 | 0.04 | 13.30 | 0.00 | 2.519 | 5.54 | 1.59 | 4.3 | 95.7 | 0.1 | 1.80 | 0.60 | 0.77 | 0.89 | 1.51 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB8 | 19028 | 2025-07-30 | 2023-12-03 | 3.41 | 4.14 | 3.49 | 3.8 | 0.006 | 1.10 | 0.0 | 0.22 | 18.68 | 0.00 | 2.169 | 5.23 | 1.51 | 4.5 | 95.3 | 0.2 | 0.92 | 0.77 | 0.84 | 1.81 | 3.9 | 0.003 | 0.89 | 0.0 | 0.04 | 13.30 | 0.00 | 2.519 | 5.54 | 1.59 | 4.3 | 95.7 | 0.1 | 1.80 | 0.60 | 0.77 | 0.89 | 1.51 | 12585 | 1605 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 8RB9 | 19029 | 2025-01-18 | 2023-12-03 | 3.19 | 3.83 | 3.27 | 3.6 | 0.007 | 0.94 | 0.0 | 0.22 | 20.53 | 0.00 | 2.148 | 5.77 | 1.99 | 5.0 | 94.9 | 0.1 | 0.54 | 0.79 | 0.85 | 2.38 | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 14.22 | 0.00 | 2.369 | 5.50 | 2.14 | 4.6 | 95.3 | 0.1 | 1.39 | 1.02 | 0.79 | 0.91 | 1.98 | 12743 | 1605 | 13 | 0 | 26 | 0 | 0 | logfile |
✔ | 8V6U | 42999 | 2024-11-15 | 2023-12-03 | 3.0 | 2.35 | — | 3.0 | 0.011 | 1.67 | 3.0 | 0.09 | 14.06 | 0.01 | 1.999 | 1.24 | 1.31 | 4.1 | 95.8 | 0.1 | 0.40 | 0.83 | 0.79 | 4.50 | 3.0 | 0.004 | 0.64 | 0.0 | 0.04 | 16.05 | 0.00 | 2.474 | 3.67 | 3.80 | 3.4 | 96.6 | 0.0 | 0.84 | 1.34 | 0.85 | 0.81 | 3.11 | 8211 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8V6U | 42999 | 2025-02-12 | 2023-12-03 | 3.0 | 2.35 | — | 3.0 | 0.011 | 1.67 | 3.0 | 0.09 | 14.06 | 0.01 | 1.999 | 1.24 | 1.31 | 4.1 | 95.8 | 0.1 | 0.40 | 0.83 | 0.79 | 4.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8211 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |