Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Vi2	43246	2025-03-12	2024-01-03	3.1	3.54	3.19	3.5	0.003	0.48	0.0	0.04	12.42	0.00	2.029	6.59	0.00	3.7	96.3	0.0	0.67	0.62	0.86	5.04	3.5	0.003	0.54	0.0	0.04	13.72	0.00	2.592	4.77	0.52	2.6	97.4	0.0	3.41	0.65	0.59	0.86	4.32	7382	924	3	0	0	0	0	logfile
✔	8Vi2	43246	2025-04-28	2024-01-03	3.1	3.54	3.19	3.5	0.003	0.48	0.0	0.04	12.42	0.00	2.029	6.59	0.00	3.7	96.3	0.0	0.67	0.62	0.86	5.04	3.5	0.003	0.54	0.0	0.04	13.72	0.00	2.592	4.77	0.52	2.6	97.4	0.0	3.41	0.65	0.59	0.86	4.32	7382	924	3	0	0	0	0	logfile
✔	8Vi2	43246	2025-05-11	2024-01-03	3.1	3.54	3.19	3.5	0.003	0.48	0.0	0.04	12.42	0.00	2.029	6.59	0.00	3.7	96.3	0.0	0.67	0.62	0.86	5.04	3.5	0.003	0.54	0.0	0.04	13.69	0.00	2.590	4.77	0.52	2.6	97.4	0.0	3.40	0.86	0.59	0.87	4.32	7382	924	3	0	0	0	0	logfile
✔	8Vi2	43246	2025-06-06	2024-01-03	3.1	3.54	3.19	3.5	0.003	0.48	0.0	0.04	12.42	0.00	2.029	6.59	0.00	3.7	96.3	0.0	0.67	0.62	0.86	5.04	3.5	0.003	0.54	0.0	0.04	13.72	0.00	2.592	4.77	0.52	2.6	97.4	0.0	3.41	0.65	0.59	0.86	4.32	7382	924	3	0	0	0	0	logfile
✔	8Vi4	43248	2024-12-28	2024-01-03	3.1	3.45	3.13	3.4	0.003	0.46	0.0	0.04	12.37	0.00	2.132	4.99	0.13	1.7	98.3	0.0	2.48	0.70	0.88	4.44	3.4	0.003	0.47	0.0	0.04	13.67	0.00	2.634	3.17	1.04	2.0	98.0	0.0	3.07	0.30	0.65	0.89	3.64	7359	924	3	0	0	0	0	logfile
✔	8Vi4	43248	2024-11-14	2024-01-03	3.1	3.45	3.13	3.4	0.003	0.46	0.0	0.04	12.37	0.00	2.132	4.99	0.13	1.7	98.3	0.0	2.48	0.70	0.88	4.44	3.4	0.003	0.47	0.0	0.04	13.67	0.00	2.634	3.17	1.04	2.0	98.0	0.0	3.07	0.30	0.65	0.89	3.64	7359	924	3	0	0	0	0	logfile
✔	8Vi4	43248	2025-07-25	2024-01-03	3.1	3.45	3.13	3.4	0.003	0.46	0.0	0.04	12.37	0.00	2.132	4.99	0.13	1.7	98.3	0.0	2.48	0.70	0.88	4.44	3.4	0.003	0.48	0.0	0.04	13.52	0.00	2.634	3.51	1.17	2.0	98.0	0.0	2.62	0.29	0.65	0.89	3.75	7359	924	3	0	0	0	0	logfile
✔	8XoT	38540	2024-12-26	2024-01-02	3.51	4.52	3.54	3.9	0.005	0.81	0.0	0.04	16.39	0.01	2.109	19.64	0.67	5.2	94.5	0.4	0.82	0.77	0.84	1.37	4.0	0.003	0.83	0.0	0.04	16.92	0.01	2.458	11.78	2.79	5.0	94.7	0.2	0.73	0.42	0.77	0.84	1.16	44532	5688	12	0	0	0	0	logfile
✔	8XoP	38537	2025-01-23	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.004	0.84	0.0	0.04	16.26	0.00	2.294	9.82	2.27	1.6	98.4	0.0	1.69	0.98	0.86	0.89	2.73	19740	2562	28	0	14	0	0	logfile
✔	8XoP	38537	2025-05-20	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.004	0.81	0.0	0.04	16.23	0.01	2.286	10.00	2.32	1.8	98.2	0.0	1.76	0.98	0.85	0.89	2.67	19740	2562	28	0	14	0	0	logfile
✔	8XoP	38537	2025-06-17	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.004	0.83	0.0	0.04	16.28	0.01	2.277	10.00	2.75	1.9	98.1	0.0	1.69	0.97	0.86	0.89	2.70	19740	2562	28	0	14	0	0	logfile
✘	8XoP	38537	2024-11-19	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19740	2562	28	0	14	0	0	logfile
✔	8XoP	38537	2025-08-24	2024-01-02	2.8	3.94	2.89	3.5	0.005	0.69	0.0	0.04	12.47	0.01	2.120	10.63	0.00	2.0	97.9	0.0	1.41	0.85	0.87	2.82	3.5	0.005	0.84	0.0	0.05	16.41	0.01	2.253	10.73	2.70	2.3	97.7	0.0	1.60	1.30	0.86	0.89	2.87	19740	2562	28	0	14	0	0	logfile
✔	8XoT	38540	2025-08-27	2024-01-02	3.51	4.52	3.54	3.9	0.005	0.81	0.0	0.04	16.39	0.01	2.109	19.60	0.67	5.2	94.5	0.4	0.82	0.77	0.84	1.37	4.0	0.005	0.82	0.0	0.04	16.93	0.01	2.335	13.45	3.62	5.5	94.3	0.2	0.66	0.43	0.78	0.85	1.16	44532	5688	12	0	0	0	0	logfile
✔	8RL8	19334	2025-06-05	2024-01-02	2.79	2.21	2.86	2.9	0.003	0.59	0.0	0.04	12.36	0.00	2.172	7.53	0.00	1.2	98.8	0.0	1.43	0.65	0.72	2.63	2.8	0.004	0.57	0.0	0.04	15.29	0.00	2.431	7.84	2.41	1.4	98.6	0.0	2.48	1.02	0.67	0.74	3.17	6469	421	2	0	1	0	3252	logfile
✔	8RLD	19339	2025-02-11	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.60	0.0	0.04	15.26	0.01	2.345	7.59	0.91	3.1	96.9	0.0	1.51	0.68	0.49	0.63	2.23	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-03-11	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.58	0.0	0.04	15.43	0.00	2.337	7.43	2.13	3.4	96.6	0.0	1.32	0.70	0.50	0.64	2.35	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-04-27	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.58	0.0	0.04	15.43	0.00	2.337	7.43	2.13	3.4	96.6	0.0	1.32	0.70	0.50	0.64	2.35	6416	422	2	0	1	0	3209	logfile
✔	8RLC	19338	2025-08-23	2024-01-02	3.9	4.07	3.88	4.0	0.003	0.49	0.0	0.04	13.21	0.00	2.204	6.32	0.00	1.5	98.5	0.0	1.54	0.58	0.66	1.68	4.0	0.003	0.56	0.0	0.04	14.95	0.00	2.210	8.64	2.81	2.5	97.5	0.0	1.60	0.64	0.61	0.71	1.55	12911	866	5	0	1	0	6330	logfile
✔	8RLD	19339	2025-05-10	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.60	0.0	0.04	15.26	0.01	2.345	7.59	0.91	3.1	96.9	0.0	1.51	0.68	0.49	0.63	2.23	6416	422	2	0	1	0	3209	logfile

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