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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8Uo4 | 42427 | 2025-05-10 | 2023-10-19 | 4.0 | 4.28 | 3.99 | 4.2 | 0.004 | 0.72 | 0.0 | 0.04 | 12.00 | 0.00 | 2.322 | 5.46 | 0.00 | 3.2 | 96.8 | 0.0 | -0.04 | 0.69 | 0.80 | — | 4.2 | 0.007 | 1.02 | 1.0 | 0.04 | 13.54 | 0.00 | 2.359 | 4.25 | 3.35 | 3.1 | 96.9 | 0.0 | 0.58 | 0.95 | 0.69 | 0.80 | — | 5702 | 910 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-01-14 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.005 | 0.58 | 0.0 | 0.04 | 15.29 | 0.00 | 2.496 | 2.48 | 1.54 | 1.9 | 98.1 | 0.0 | 1.07 | 0.93 | 0.65 | 0.88 | 2.51 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-02-11 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.005 | 0.58 | 0.0 | 0.04 | 15.29 | 0.00 | 2.496 | 2.48 | 1.54 | 1.9 | 98.1 | 0.0 | 1.07 | 0.93 | 0.65 | 0.88 | 2.51 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-03-11 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 15.40 | 0.00 | 2.503 | 2.56 | 2.23 | 1.7 | 98.3 | 0.0 | 1.23 | 0.93 | 0.65 | 0.88 | 2.38 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-04-27 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 15.40 | 0.00 | 2.503 | 2.56 | 2.23 | 1.7 | 98.3 | 0.0 | 1.23 | 0.93 | 0.65 | 0.88 | 2.38 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-05-10 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.004 | 0.53 | 0.0 | 0.04 | 15.30 | 0.00 | 2.501 | 2.48 | 1.88 | 1.6 | 98.4 | 0.0 | 1.39 | 0.93 | 0.65 | 0.87 | 2.74 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-06-05 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 15.40 | 0.00 | 2.503 | 2.56 | 2.23 | 1.7 | 98.3 | 0.0 | 1.23 | 0.93 | 0.65 | 0.88 | 2.38 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2025-07-24 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 15.40 | 0.00 | 2.503 | 2.56 | 2.23 | 1.7 | 98.3 | 0.0 | 1.23 | 0.93 | 0.65 | 0.88 | 2.38 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2024-10-10 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.002 | 0.50 | 0.0 | 0.04 | 15.26 | 0.00 | 2.508 | 2.96 | 1.37 | 1.2 | 98.8 | 0.0 | 1.46 | 1.28 | 0.64 | 0.87 | 2.41 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2024-11-14 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.002 | 0.50 | 0.0 | 0.04 | 15.26 | 0.00 | 2.508 | 2.96 | 1.37 | 1.2 | 98.8 | 0.0 | 1.46 | 1.28 | 0.64 | 0.87 | 2.41 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNP | 42412 | 2024-12-27 | 2023-10-19 | 3.3 | 3.63 | 3.39 | 3.6 | 0.006 | 0.80 | 0.0 | 0.04 | 13.79 | 0.00 | 2.207 | 6.73 | 0.00 | 1.9 | 98.1 | 0.0 | 0.82 | 0.65 | 0.87 | 3.59 | 3.6 | 0.002 | 0.50 | 0.0 | 0.04 | 15.26 | 0.00 | 2.508 | 2.96 | 1.37 | 1.2 | 98.8 | 0.0 | 1.46 | 1.28 | 0.64 | 0.87 | 2.41 | 6559 | 906 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-01-14 | 2023-10-19 | 3.5 | 3.84 | 3.62 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.14 | 0.00 | 2.436 | 2.97 | 2.18 | 1.7 | 98.3 | 0.0 | 1.71 | 0.39 | 0.64 | 0.84 | 2.55 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-02-11 | 2023-10-19 | 3.5 | 3.84 | 3.62 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.14 | 0.00 | 2.436 | 2.97 | 2.18 | 1.7 | 98.3 | 0.0 | 1.71 | 0.39 | 0.64 | 0.84 | 2.55 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-03-11 | 2023-10-19 | 3.5 | 3.84 | 3.61 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.17 | 0.00 | 2.509 | 3.37 | 2.01 | 2.1 | 97.9 | 0.0 | 1.70 | 0.38 | 0.64 | 0.84 | 2.50 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-04-27 | 2023-10-19 | 3.5 | 3.84 | 3.61 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.17 | 0.00 | 2.509 | 3.37 | 2.01 | 2.1 | 97.9 | 0.0 | 1.70 | 0.38 | 0.64 | 0.84 | 2.50 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-05-10 | 2023-10-19 | 3.5 | 3.84 | 3.61 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.14 | 0.00 | 2.436 | 2.97 | 2.18 | 1.7 | 98.3 | 0.0 | 1.71 | 0.39 | 0.64 | 0.84 | 2.55 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-06-05 | 2023-10-19 | 3.5 | 3.84 | 3.61 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.17 | 0.00 | 2.509 | 3.37 | 2.01 | 2.1 | 97.9 | 0.0 | 1.70 | 0.38 | 0.64 | 0.84 | 2.50 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2025-07-24 | 2023-10-19 | 3.5 | 3.84 | 3.61 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.17 | 0.00 | 2.509 | 3.37 | 2.01 | 2.1 | 97.9 | 0.0 | 1.70 | 0.38 | 0.64 | 0.84 | 2.50 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2024-10-10 | 2023-10-19 | 3.5 | 3.84 | 3.62 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.002 | 0.50 | 0.0 | 0.04 | 15.15 | 0.00 | 2.513 | 3.13 | 2.01 | 1.3 | 98.7 | 0.0 | 1.81 | 0.39 | 0.64 | 0.84 | 2.53 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UNU | 42417 | 2024-11-14 | 2023-10-19 | 3.5 | 3.84 | 3.62 | 3.8 | 0.005 | 0.83 | 0.0 | 0.05 | 14.14 | 0.00 | 2.227 | 6.74 | 0.50 | 1.5 | 98.5 | 0.0 | 1.67 | 0.63 | 0.83 | 2.91 | 3.8 | 0.002 | 0.50 | 0.0 | 0.04 | 15.15 | 0.00 | 2.513 | 3.13 | 2.01 | 1.3 | 98.7 | 0.0 | 1.81 | 0.39 | 0.64 | 0.84 | 2.53 | 6514 | 890 | 6 | 0 | 2 | 0 | 0 | logfile |