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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8WPY | 37726 | 2025-01-15 | 2023-10-10 | 3.02 | 2.32 | 3.01 | 2.1 | 0.003 | 0.50 | 0.0 | 0.04 | 10.49 | 0.00 | 2.208 | 3.63 | 0.65 | 2.7 | 97.3 | 0.0 | 0.14 | 0.76 | 0.79 | 3.69 | 2.0 | 0.005 | 0.62 | 0.0 | 0.04 | 13.50 | 0.00 | 2.430 | 5.87 | 2.06 | 3.5 | 96.5 | 0.0 | -0.18 | 0.96 | 0.77 | 0.82 | 3.24 | 8408 | 1090 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8WPY | 37726 | 2025-02-12 | 2023-10-10 | 3.02 | 2.32 | 3.01 | 2.1 | 0.003 | 0.50 | 0.0 | 0.04 | 10.49 | 0.00 | 2.208 | 3.63 | 0.65 | 2.7 | 97.3 | 0.0 | 0.14 | 0.76 | 0.79 | 3.69 | 2.0 | 0.005 | 0.62 | 0.0 | 0.04 | 13.50 | 0.00 | 2.430 | 5.87 | 2.06 | 3.5 | 96.5 | 0.0 | -0.18 | 0.96 | 0.77 | 0.82 | 3.24 | 8408 | 1090 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8WPY | 37726 | 2025-03-12 | 2023-10-10 | 3.02 | 2.32 | 3.01 | 2.1 | 0.003 | 0.50 | 0.0 | 0.04 | 10.49 | 0.00 | 2.208 | 3.63 | 0.65 | 2.7 | 97.3 | 0.0 | 0.14 | 0.76 | 0.79 | 3.69 | 2.1 | 0.008 | 1.29 | 3.0 | 0.06 | 13.27 | 0.01 | 2.290 | 7.39 | 1.41 | 2.8 | 97.2 | 0.0 | -0.05 | 0.96 | 0.77 | 0.82 | 3.15 | 8408 | 1090 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8WPY | 37726 | 2025-04-29 | 2023-10-10 | 3.02 | 2.32 | 3.01 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 10.49 | 0.00 | 2.208 | 3.63 | 0.65 | 2.7 | 97.3 | 0.0 | 0.14 | 0.76 | 0.79 | 3.69 | 2.0 | 0.004 | 0.62 | 0.0 | 0.04 | 13.44 | 0.00 | 2.423 | 5.63 | 2.61 | 3.2 | 96.8 | 0.0 | -0.18 | 0.96 | 0.77 | 0.82 | 3.23 | 8408 | 1090 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8WPM | 37719 | 2025-05-21 | 2023-10-10 | 3.43 | 3.65 | 3.46 | 3.7 | 0.005 | 0.80 | 0.0 | 0.04 | 16.53 | 0.01 | 2.233 | 5.65 | 0.46 | 2.7 | 97.3 | 0.0 | -0.26 | 0.67 | 0.82 | 1.33 | 3.7 | 0.005 | 0.63 | 0.0 | 0.04 | 16.92 | 0.00 | 2.210 | 8.67 | 1.95 | 3.1 | 96.9 | 0.0 | 1.89 | 0.41 | 0.67 | 0.83 | 1.34 | 22034 | 2685 | 8 | 0 | 11 | 0 | 0 | logfile |
✔ | 8QSi | 18633 | 2024-12-28 | 2023-10-10 | 2.75 | 3.33 | 2.76 | 3.1 | 0.010 | 1.47 | 28.0 | 0.10 | 14.45 | 0.01 | 1.925 | 0.42 | 0.39 | 4.3 | 95.7 | 0.0 | -0.88 | 0.75 | 0.89 | 4.07 | 3.1 | 0.003 | 0.62 | 0.0 | 0.04 | 16.92 | 0.00 | 1.968 | 4.78 | 0.84 | 3.3 | 96.7 | 0.0 | 1.12 | 0.71 | 0.68 | 0.86 | 3.56 | 50784 | 6492 | 36 | 0 | 12 | 0 | 0 | logfile |
✔ | 8WPM | 37719 | 2025-06-19 | 2023-10-10 | 3.43 | 3.65 | 3.46 | 3.7 | 0.005 | 0.80 | 0.0 | 0.04 | 16.53 | 0.01 | 2.233 | 5.65 | 0.46 | 2.7 | 97.3 | 0.0 | -0.26 | 0.67 | 0.82 | 1.33 | 3.6 | 0.005 | 0.61 | 0.0 | 0.04 | 16.93 | 0.00 | 2.230 | 7.67 | 2.87 | 2.9 | 97.1 | 0.0 | 2.10 | 0.39 | 0.67 | 0.83 | 1.30 | 22034 | 2685 | 8 | 0 | 11 | 0 | 0 | logfile |
✔ | 8WPY | 37726 | 2025-05-11 | 2023-10-10 | 3.02 | 2.32 | 3.01 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 10.49 | 0.00 | 2.208 | 3.63 | 0.65 | 2.7 | 97.3 | 0.0 | 0.14 | 0.76 | 0.79 | 3.69 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.53 | 0.00 | 2.418 | 5.15 | 2.17 | 3.2 | 96.8 | 0.0 | -0.17 | 0.96 | 0.77 | 0.82 | 3.26 | 8408 | 1090 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8QSi | 18633 | 2024-11-19 | 2023-10-10 | 2.75 | 3.33 | 2.76 | 3.1 | 0.010 | 1.47 | 28.0 | 0.10 | 14.45 | 0.01 | 1.925 | 0.42 | 0.39 | 4.3 | 95.7 | 0.0 | -0.88 | 0.75 | 0.89 | 4.07 | 3.1 | 0.003 | 0.62 | 0.0 | 0.04 | 16.92 | 0.00 | 1.968 | 4.78 | 0.84 | 3.3 | 96.7 | 0.0 | 1.12 | 0.71 | 0.68 | 0.86 | 3.56 | 50784 | 6492 | 36 | 0 | 12 | 0 | 0 | logfile |
✔ | 8WPY | 37726 | 2025-06-07 | 2023-10-10 | 3.02 | 2.32 | 3.01 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 10.49 | 0.00 | 2.208 | 3.63 | 0.65 | 2.7 | 97.3 | 0.0 | 0.14 | 0.76 | 0.79 | 3.69 | 2.0 | 0.004 | 0.62 | 0.0 | 0.04 | 13.44 | 0.00 | 2.423 | 5.63 | 2.61 | 3.2 | 96.8 | 0.0 | -0.18 | 0.96 | 0.77 | 0.82 | 3.23 | 8408 | 1090 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8UiR | 42302 | 2025-06-21 | 2023-10-10 | 3.2 | 3.38 | 3.20 | 3.4 | 0.004 | 0.75 | 0.0 | 0.05 | 14.13 | 0.01 | 2.307 | 2.38 | 0.04 | 4.0 | 96.0 | 0.0 | -1.30 | 0.71 | 0.82 | 2.71 | 3.4 | 0.003 | 0.59 | 0.0 | 0.05 | 14.96 | 0.00 | 2.493 | 3.62 | 1.30 | 3.3 | 96.7 | 0.0 | 0.00 | 1.15 | 0.70 | 0.84 | 2.61 | 24879 | 3105 | 15 | 0 | 48 | 0 | 0 | logfile |
✔ | 8UiR | 42302 | 2025-05-24 | 2023-10-10 | 3.2 | 3.38 | 3.20 | 3.4 | 0.004 | 0.75 | 0.0 | 0.05 | 14.13 | 0.01 | 2.307 | 2.38 | 0.04 | 4.0 | 96.0 | 0.0 | -1.30 | 0.71 | 0.82 | 2.71 | 3.4 | 0.004 | 0.62 | 0.0 | 0.05 | 14.94 | 0.00 | 2.481 | 3.34 | 1.34 | 3.7 | 96.3 | 0.0 | -0.12 | 1.15 | 0.71 | 0.84 | 2.65 | 24879 | 3105 | 15 | 0 | 48 | 0 | 0 | logfile |
✘ | 8WPK | 37717 | 2024-12-31 | 2023-10-10 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16854 | 1909 | 11 | 70 | 1 | 0 | 0 | logfile |
✘ | 8WPK | 37717 | 2024-11-18 | 2023-10-10 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16854 | 1909 | 11 | 70 | 1 | 0 | 0 | logfile |
✔ | 8Ui9 | 42289 | 2025-06-18 | 2023-10-10 | 3.5 | 3.72 | 3.53 | 3.6 | 0.005 | 0.88 | 0.0 | 0.05 | 17.19 | 0.01 | 1.992 | 8.23 | 0.78 | 3.2 | 96.8 | 0.0 | -1.22 | 0.76 | 0.74 | 1.02 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 17.45 | 0.00 | 1.964 | 12.13 | 2.75 | 3.0 | 97.0 | 0.0 | 0.17 | 0.49 | 0.77 | 0.74 | 0.91 | 21836 | 2760 | 13 | 0 | 9 | 0 | 0 | logfile |
✔ | 8UiN | 42300 | 2024-10-10 | 2023-10-10 | 3.86 | 4.18 | 3.93 | 4.1 | 0.003 | 0.53 | 0.0 | 0.04 | 14.53 | 0.00 | 2.178 | 9.14 | 0.07 | 3.7 | 96.2 | 0.1 | 0.38 | 0.78 | 0.79 | 1.85 | 4.1 | 0.005 | 0.68 | 0.0 | 0.04 | 16.15 | 0.00 | 2.471 | 9.85 | 2.74 | 3.7 | 96.2 | 0.1 | 0.09 | 0.42 | 0.81 | 0.83 | 1.49 | 28249 | 3746 | 12 | 0 | 5 | 0 | 0 | logfile |
✔ | 8Ui7 | 42287 | 2025-05-21 | 2023-10-10 | 4.2 | 4.65 | 4.35 | 4.2 | 0.004 | 0.97 | 0.0 | 0.05 | 14.14 | 0.01 | 1.992 | 10.65 | 0.04 | 3.4 | 96.6 | 0.0 | -1.37 | 0.85 | 0.77 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 14.27 | 0.00 | 1.787 | 18.29 | 0.00 | 3.8 | 96.2 | 0.0 | 0.01 | 0.98 | 0.86 | 0.78 | — | 21831 | 2760 | 13 | 0 | 8 | 0 | 0 | logfile |
✔ | 8Ui7 | 42287 | 2025-01-24 | 2023-10-10 | 4.2 | 4.65 | 4.37 | 4.2 | 0.004 | 0.97 | 0.0 | 0.05 | 14.14 | 0.01 | 1.992 | 10.65 | 0.04 | 3.4 | 96.6 | 0.0 | -1.37 | 0.85 | 0.77 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 14.27 | 0.00 | 1.787 | 18.29 | 0.00 | 3.8 | 96.2 | 0.0 | 0.01 | 0.98 | 0.86 | 0.78 | — | 21831 | 2760 | 13 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UiN | 42300 | 2024-11-19 | 2023-10-10 | 3.86 | 4.18 | 3.93 | 4.1 | 0.003 | 0.53 | 0.0 | 0.04 | 14.53 | 0.00 | 2.178 | 9.14 | 0.07 | 3.7 | 96.2 | 0.1 | 0.38 | 0.78 | 0.79 | 1.85 | 4.1 | 0.005 | 0.68 | 0.0 | 0.04 | 16.15 | 0.00 | 2.471 | 9.85 | 2.74 | 3.7 | 96.2 | 0.1 | 0.09 | 0.42 | 0.81 | 0.83 | 1.49 | 28249 | 3746 | 12 | 0 | 5 | 0 | 0 | logfile |
✔ | 8Ui9 | 42289 | 2024-11-20 | 2023-10-10 | 3.5 | 3.72 | 3.53 | 3.6 | 0.005 | 0.88 | 0.0 | 0.05 | 17.19 | 0.01 | 1.992 | 8.23 | 0.78 | 3.2 | 96.8 | 0.0 | -1.22 | 0.76 | 0.74 | 1.02 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 17.51 | 0.00 | 1.944 | 11.40 | 2.59 | 3.1 | 96.9 | 0.0 | 0.25 | 0.46 | 0.76 | 0.73 | 0.91 | 21836 | 2760 | 13 | 0 | 9 | 0 | 0 | logfile |