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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8X1i | 37996 | 2025-05-10 | 2023-11-07 | 4.0 | 4.14 | 2.16 | 4.1 | 0.012 | 1.87 | 1.0 | 0.10 | 15.72 | 0.01 | 1.891 | 0.00 | 2.93 | 5.2 | 94.8 | 0.0 | -2.05 | 0.41 | 0.68 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 15.07 | 0.00 | 1.809 | 5.93 | 0.98 | 5.7 | 94.3 | 0.0 | -0.18 | 1.92 | 0.43 | 0.77 | — | 5722 | 369 | 2 | 0 | 2 | 0 | 2840 | logfile |
✔ | 8R2H | 18842 | 2024-12-29 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.005 | 0.62 | 0.0 | 0.05 | 14.01 | 0.00 | 1.901 | 10.55 | 1.81 | 2.4 | 97.6 | 0.0 | -0.04 | 0.38 | 0.75 | 0.73 | 3.05 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8R2H | 18842 | 2025-08-23 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.004 | 0.59 | 0.0 | 0.04 | 14.11 | 0.00 | 1.920 | 9.64 | 1.49 | 2.6 | 97.4 | 0.0 | 0.13 | 0.39 | 0.75 | 0.72 | 2.82 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8R2H | 18842 | 2025-07-29 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.004 | 0.62 | 0.0 | 0.05 | 14.11 | 0.00 | 1.908 | 10.07 | 1.18 | 2.4 | 97.6 | 0.0 | 0.06 | 0.38 | 0.75 | 0.72 | 3.07 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8R2H | 18842 | 2025-05-14 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.003 | 0.59 | 0.0 | 0.04 | 14.01 | 0.00 | 1.936 | 9.25 | 1.57 | 2.3 | 97.7 | 0.0 | 0.13 | 0.39 | 0.75 | 0.72 | 3.11 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8R2H | 18842 | 2025-01-18 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.003 | 0.59 | 0.0 | 0.04 | 14.01 | 0.00 | 1.936 | 9.25 | 1.57 | 2.3 | 97.7 | 0.0 | 0.13 | 0.39 | 0.75 | 0.72 | 3.11 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8R2H | 18842 | 2025-06-10 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.004 | 0.62 | 0.0 | 0.05 | 14.11 | 0.00 | 1.908 | 10.07 | 1.18 | 2.4 | 97.6 | 0.0 | 0.06 | 0.38 | 0.75 | 0.72 | 3.07 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8R2H | 18842 | 2024-11-16 | 2023-11-06 | 2.42 | 2.05 | 2.56 | 1.6 | 0.003 | 0.52 | 0.0 | 0.04 | 10.24 | 0.01 | 1.914 | 10.77 | 0.55 | 2.6 | 97.4 | 0.0 | -0.09 | 0.76 | 0.72 | 3.71 | 1.6 | 0.005 | 0.62 | 0.0 | 0.05 | 14.01 | 0.00 | 1.901 | 10.55 | 1.81 | 2.4 | 97.6 | 0.0 | -0.04 | 0.38 | 0.75 | 0.73 | 3.05 | 11484 | 1394 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8UWC | 42661 | 2025-06-06 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.89 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.65 | 0.0 | 0.05 | 16.40 | 0.00 | 2.356 | 7.81 | 2.15 | 4.8 | 95.2 | 0.0 | -0.47 | 0.83 | 0.70 | 0.72 | 2.93 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-01-15 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.88 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.42 | 0.00 | 2.352 | 7.29 | 2.15 | 3.1 | 96.9 | 0.0 | -0.22 | 0.82 | 0.70 | 0.72 | 2.97 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-07-25 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.89 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.65 | 0.0 | 0.05 | 16.40 | 0.00 | 2.356 | 7.81 | 2.15 | 4.8 | 95.2 | 0.0 | -0.47 | 0.83 | 0.70 | 0.72 | 2.93 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-08-22 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.89 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.64 | 0.0 | 0.05 | 16.57 | 0.00 | 2.331 | 7.94 | 2.15 | 5.0 | 95.0 | 0.0 | -0.40 | 0.81 | 0.70 | 0.72 | 2.60 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2024-11-15 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.88 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.67 | 0.0 | 0.05 | 16.25 | 0.00 | 2.358 | 8.21 | 1.67 | 4.5 | 95.5 | 0.0 | -0.34 | 0.82 | 0.70 | 0.72 | 2.79 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2024-12-28 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.88 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.67 | 0.0 | 0.05 | 16.25 | 0.00 | 2.358 | 8.21 | 1.67 | 4.5 | 95.5 | 0.0 | -0.34 | 0.82 | 0.70 | 0.72 | 2.79 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-05-11 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.89 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.66 | 0.0 | 0.05 | 16.44 | 0.00 | 2.343 | 7.81 | 2.15 | 4.1 | 95.9 | 0.0 | -0.31 | 0.82 | 0.70 | 0.72 | 2.85 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-04-28 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.89 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.004 | 0.65 | 0.0 | 0.05 | 16.40 | 0.00 | 2.356 | 7.81 | 2.15 | 4.8 | 95.2 | 0.0 | -0.47 | 0.83 | 0.70 | 0.72 | 2.93 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-02-12 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.88 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.42 | 0.00 | 2.352 | 7.29 | 2.15 | 3.1 | 96.9 | 0.0 | -0.22 | 0.82 | 0.70 | 0.72 | 2.97 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8UWC | 42661 | 2025-03-12 | 2023-11-06 | 2.27 | 2.89 | 2.21 | 2.7 | 0.008 | 0.88 | 0.0 | 0.05 | 15.70 | 0.01 | 1.906 | 13.81 | 1.67 | 5.4 | 94.6 | 0.0 | -1.61 | 0.72 | 0.69 | 2.89 | 2.7 | 0.003 | 0.60 | 0.0 | 0.05 | 16.45 | 0.00 | 2.377 | 7.16 | 1.91 | 3.3 | 96.7 | 0.0 | -0.31 | 0.83 | 0.70 | 0.72 | 2.70 | 7767 | 494 | 2 | 0 | 1 | 97 | 3821 | logfile |
✔ | 8R2i | 18848 | 2024-11-20 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.021 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.91 | 0.0 | 0.04 | 16.39 | 0.00 | 2.001 | 8.96 | 1.22 | 3.0 | 97.0 | 0.0 | 1.72 | 0.35 | 0.73 | 0.89 | 3.07 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |
✔ | 8R2i | 18848 | 2025-05-20 | 2023-11-06 | 2.9 | 3.54 | 2.94 | 3.3 | 0.026 | 1.62 | 0.0 | 0.09 | 21.20 | 0.01 | 2.210 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | 1.58 | 0.75 | 0.83 | 3.31 | 3.3 | 0.003 | 0.88 | 0.0 | 0.04 | 16.14 | 0.00 | 2.030 | 9.07 | 0.90 | 3.2 | 96.8 | 0.0 | 1.85 | 0.34 | 0.72 | 0.88 | 3.02 | 18054 | 1923 | 21 | 0 | 58 | 5 | 0 | logfile |