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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9BiS | 44600 | 2024-08-04 | 2024-04-24 | 3.2 | 3.55 | 3.16 | 3.4 | 0.004 | 0.78 | 0.0 | 0.04 | 18.67 | 0.00 | 1.376 | 7.08 | 0.40 | 8.7 | 91.3 | 0.0 | 0.07 | 0.59 | 0.82 | 2.90 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 18.34 | 0.00 | 2.278 | 4.65 | 1.60 | 7.0 | 93.0 | 0.0 | 0.77 | 0.78 | 0.61 | 0.84 | 3.10 | 9444 | 595 | 3 | 0 | 1 | 0 | 4734 | logfile |
✔ | 9BiU | 44602 | 2024-08-04 | 2024-04-24 | 2.9 | 3.33 | 2.90 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.204 | 4.85 | 2.00 | 7.0 | 93.0 | 0.0 | 0.77 | 0.63 | 0.84 | 2.63 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.16 | 0.00 | 2.278 | 5.49 | 2.59 | 6.5 | 93.5 | 0.0 | 0.80 | 0.83 | 0.62 | 0.85 | 2.50 | 9458 | 595 | 3 | 0 | 1 | 0 | 4738 | logfile |
✔ | 8Z9Z | 39873 | 2024-08-05 | 2024-04-24 | 3.5 | 3.90 | 3.63 | 3.8 | 0.002 | 0.48 | 0.0 | 0.04 | 18.14 | 0.00 | 2.209 | 9.03 | 0.29 | 2.5 | 97.5 | 0.0 | 3.18 | 0.61 | 0.77 | 1.29 | 3.8 | 0.003 | 0.49 | 0.0 | 0.04 | 18.32 | 0.00 | 2.441 | 7.82 | 3.77 | 2.3 | 97.7 | 0.0 | 3.23 | 0.28 | 0.61 | 0.79 | 1.33 | 12648 | 1519 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 9BiB | 44586 | 2024-08-07 | 2024-04-23 | 3.81 | 4.09 | 3.87 | 4.0 | 0.004 | 0.63 | 12.0 | 0.06 | 7.50 | 0.00 | 2.200 | 3.34 | 4.65 | 3.0 | 96.9 | 0.1 | -2.18 | 0.64 | 0.64 | 1.95 | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 11.64 | 0.00 | 2.425 | 3.52 | 3.72 | 4.1 | 95.9 | 0.0 | 0.70 | 0.65 | 0.68 | 0.71 | 1.94 | 19269 | 3172 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Z9Q | 39867 | 2024-08-05 | 2024-04-23 | 2.33 | 2.83 | 2.42 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 13.21 | 0.00 | 2.117 | 8.28 | 0.00 | 3.5 | 96.5 | 0.0 | 0.58 | 0.70 | 0.83 | 4.40 | 2.7 | 0.003 | 0.58 | 0.0 | 0.04 | 15.99 | 0.00 | 2.492 | 6.78 | 1.11 | 3.4 | 96.6 | 0.0 | 0.79 | 0.37 | 0.71 | 0.85 | 4.10 | 12362 | 1505 | 4 | 9 | 1 | 0 | 0 | logfile |
✔ | 8Z9R | 39868 | 2024-08-10 | 2024-04-23 | 2.58 | 3.13 | 2.69 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 13.83 | 0.00 | 2.121 | 7.99 | 0.00 | 4.2 | 95.8 | 0.0 | 0.23 | 0.72 | 0.81 | 3.56 | 3.0 | 0.003 | 0.56 | 1.0 | 0.04 | 16.26 | 0.00 | 2.305 | 6.68 | 1.20 | 3.6 | 96.4 | 0.0 | 0.51 | 1.06 | 0.73 | 0.82 | 3.07 | 28075 | 3358 | 11 | 47 | 2 | 0 | 0 | logfile |
✔ | 8Z90 | 39852 | 2024-08-05 | 2024-04-22 | 2.87 | 3.20 | 2.88 | 3.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.44 | 0.01 | 2.113 | 10.76 | 0.00 | 3.8 | 96.2 | 0.0 | -0.73 | 0.81 | 0.88 | 3.65 | 3.1 | 0.003 | 0.65 | 0.0 | 0.04 | 16.79 | 0.00 | 2.499 | 9.14 | 1.13 | 3.9 | 96.1 | 0.0 | 0.26 | 1.01 | 0.80 | 0.89 | 3.31 | 13481 | 1575 | 6 | 35 | 1 | 0 | 0 | logfile |
✘ | 9BHT | 44552 | 2024-08-05 | 2024-04-22 | 3.26 | 4.41 | 3.27 | 3.3 | 0.006 | 1.13 | 4.0 | 0.05 | 19.39 | 0.01 | 2.058 | 21.47 | 2.05 | 6.0 | 93.0 | 1.0 | -0.68 | 0.84 | 0.70 | 1.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12725 | 1562 | 12 | 4 | 2 | 0 | 0 | logfile |
✔ | 9BHW | 44555 | 2024-08-03 | 2024-04-22 | 2.72 | 3.56 | 2.84 | 3.3 | 0.005 | 0.72 | 0.0 | 0.05 | 14.14 | 0.00 | 2.158 | 6.79 | 0.31 | 2.0 | 98.0 | 0.0 | 0.77 | 0.85 | 0.86 | 4.93 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 15.95 | 0.00 | 2.467 | 4.73 | 1.13 | 2.1 | 97.9 | 0.0 | 2.06 | 0.68 | 0.79 | 0.85 | 3.99 | 8759 | 1071 | 8 | 4 | 0 | 0 | 0 | logfile |
✔ | 8Z8J | 39848 | 2024-08-05 | 2024-04-22 | 3.16 | 3.46 | 3.17 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 13.58 | 0.01 | 2.218 | 9.57 | 0.00 | 4.7 | 95.3 | 0.0 | -0.26 | 0.79 | 0.87 | 2.49 | 3.4 | 0.002 | 0.58 | 0.0 | 0.04 | 15.32 | 0.00 | 2.337 | 8.07 | 1.20 | 4.7 | 95.3 | 0.0 | 0.31 | 0.38 | 0.81 | 0.89 | 2.31 | 13766 | 1665 | 5 | 15 | 0 | 0 | 0 | logfile |
✔ | 8Z8X | 39850 | 2024-08-06 | 2024-04-22 | 3.06 | 3.36 | 3.12 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 14.96 | 0.01 | 2.148 | 12.31 | 0.00 | 4.9 | 95.1 | 0.0 | -0.67 | 0.80 | 0.87 | 2.83 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 16.40 | 0.00 | 2.470 | 8.61 | 1.41 | 4.8 | 95.2 | 0.0 | -0.03 | 1.34 | 0.81 | 0.90 | 2.80 | 14768 | 1730 | 6 | 35 | 1 | 0 | 0 | logfile |
✔ | 8Z8N | 39849 | 2024-08-05 | 2024-04-22 | 2.79 | 3.11 | 2.79 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 12.85 | 0.01 | 2.114 | 10.07 | 0.00 | 4.2 | 95.8 | 0.0 | -0.39 | 0.75 | 0.84 | 2.78 | 3.0 | 0.004 | 0.67 | 0.0 | 0.04 | 16.18 | 0.01 | 2.444 | 8.46 | 1.77 | 4.3 | 95.7 | 0.0 | -0.21 | 1.35 | 0.77 | 0.87 | 2.84 | 12485 | 1510 | 5 | 15 | 0 | 0 | 0 | logfile |
✔ | 8Z85 | 39838 | 2024-08-04 | 2024-04-21 | 2.3 | 2.74 | 2.30 | 2.6 | 0.002 | 0.48 | 0.0 | 0.04 | 13.26 | 0.00 | 2.234 | 7.19 | 0.00 | 2.4 | 97.6 | 0.0 | 0.02 | 0.79 | 0.86 | 4.75 | 2.6 | 0.002 | 0.53 | 0.0 | 0.04 | 15.44 | 0.00 | 2.467 | 6.08 | 1.07 | 2.2 | 97.8 | 0.0 | 0.96 | 1.10 | 0.79 | 0.87 | 4.18 | 10467 | 1256 | 5 | 18 | 0 | 0 | 0 | logfile |
✔ | 9BHA | 44538 | 2024-08-05 | 2024-04-19 | 3.5 | 3.62 | 3.42 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.47 | 0.01 | 2.343 | 1.70 | 0.00 | 0.5 | 99.4 | 0.1 | -1.83 | 0.72 | 0.77 | 2.78 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 17.85 | 0.00 | 2.498 | 6.57 | 1.54 | 1.6 | 98.4 | 0.0 | 1.05 | 0.81 | 0.73 | 0.78 | 1.90 | 13264 | 1586 | 4 | 49 | 0 | 0 | 0 | logfile |
✔ | 9BH6 | 44534 | 2024-08-08 | 2024-04-19 | 3.3 | 2.41 | 3.32 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 12.64 | 0.01 | 2.304 | 1.35 | 0.00 | 0.5 | 99.4 | 0.1 | -1.51 | 0.84 | 0.81 | 3.48 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 15.30 | 0.00 | 2.498 | 5.15 | 1.57 | 1.7 | 98.3 | 0.0 | 1.54 | 1.36 | 0.84 | 0.82 | 2.34 | 24388 | 3096 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-08-05 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.76 | 0.00 | 2.524 | 6.81 | 1.47 | 1.9 | 98.1 | 0.0 | 0.87 | 2.06 | 0.74 | 0.76 | 1.60 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-08-05 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.09 | 0.00 | 2.534 | 6.56 | 2.32 | 2.0 | 98.0 | 0.0 | 1.96 | 2.04 | 0.83 | 0.79 | 1.12 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH8 | 44536 | 2024-08-05 | 2024-04-19 | 3.6 | 3.61 | 3.50 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.01 | 2.310 | 1.53 | 0.15 | 0.7 | 99.3 | 0.0 | -2.28 | 0.74 | 0.75 | 2.34 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 17.65 | 0.00 | 2.439 | 7.50 | 1.84 | 1.9 | 98.1 | 0.0 | 0.55 | 1.22 | 0.76 | 0.76 | 1.40 | 13051 | 1574 | 4 | 44 | 0 | 0 | 0 | logfile |
✔ | 9BEW | 44484 | 2024-08-09 | 2024-04-16 | 3.3 | 3.87 | 3.35 | 3.6 | 0.004 | 0.73 | 0.0 | 0.14 | 15.81 | 0.00 | 2.322 | 2.73 | 1.01 | 3.7 | 96.3 | 0.0 | -3.67 | 0.78 | 0.83 | 2.92 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 13.99 | 0.00 | 2.149 | 4.80 | 1.91 | 4.3 | 95.7 | 0.0 | -0.99 | 0.58 | 0.79 | 0.85 | 2.57 | 26100 | 3087 | 51 | 0 | 135 | 0 | 0 | logfile |
✔ | 9BF6 | 44491 | 2024-08-07 | 2024-04-16 | 4.5 | 7.51 | 4.66 | 4.5 | 0.003 | 0.67 | 2.0 | 0.05 | 12.77 | 0.00 | 2.022 | 3.80 | 0.10 | 8.4 | 91.4 | 0.2 | -1.57 | 0.83 | 0.78 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.05 | 12.86 | 0.00 | 2.320 | 11.07 | 0.00 | 8.9 | 91.0 | 0.1 | -1.56 | 0.88 | 0.84 | 0.80 | — | 20330 | 2367 | 39 | 0 | 130 | 0 | 0 | logfile |