The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8iKA | 35507 | 2023-04-25 | 2023-02-28 | 2.75 | 2.89 | 2.81 | 2.9 | 0.008 | 1.22 | 0.0 | 0.07 | 12.95 | 0.02 | 2.225 | 4.42 | 0.00 | 1.5 | 98.5 | 0.0 | -0.45 | 0.82 | 0.88 | 4.57 | 2.9 | 0.005 | 0.55 | 0.0 | 0.04 | 16.79 | 0.00 | 2.145 | 3.77 | 1.06 | 1.4 | 98.6 | 0.0 | 1.61 | 1.50 | 0.82 | 0.90 | 4.07 | 122040 | 15900 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G88 | 29843 | 2023-04-23 | 2023-02-17 | 4.8 | 7.18 | 4.63 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 28.10 | 0.00 | 2.275 | 7.12 | 0.93 | 1.0 | 99.0 | 0.0 | 1.45 | 0.78 | 0.60 | — | 3.2 | 0.006 | 0.68 | 0.0 | 0.04 | 29.42 | 0.00 | 2.075 | 29.38 | 0.00 | 2.5 | 97.5 | 0.0 | 1.55 | 2.54 | 0.91 | 0.81 | — | 13995 | 891 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 8G8G | 29850 | 2023-04-23 | 2023-02-17 | 3.2 | 4.22 | 3.27 | 3.4 | 0.005 | 0.59 | 0.0 | 0.03 | 27.75 | 0.00 | 1.622 | 6.71 | 0.64 | 1.8 | 98.2 | 0.0 | -0.50 | 0.70 | 0.50 | 0.77 | 3.0 | 0.004 | 0.65 | 0.0 | 0.03 | 28.86 | 0.00 | 2.193 | 11.69 | 0.13 | 2.9 | 97.1 | 0.0 | 1.87 | 1.57 | 0.91 | 0.87 | 1.73 | 14558 | 931 | 11 | 348 | 0 | 0 | 0 | logfile |
✔ | 8G86 | 29837 | 2023-04-22 | 2023-02-17 | 2.3 | 2.24 | 2.41 | 2.5 | 0.003 | 0.50 | 0.0 | 0.03 | 27.67 | 0.00 | 2.275 | 6.71 | 0.95 | 0.9 | 99.1 | 0.0 | 1.60 | 0.69 | 0.83 | 5.02 | 2.4 | 0.005 | 0.63 | 0.0 | 0.04 | 29.42 | 0.00 | 2.112 | 7.41 | 2.06 | 1.5 | 98.5 | 0.0 | 2.50 | 0.92 | 0.70 | 0.85 | 4.86 | 11972 | 759 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8G8B | 29845 | 2023-04-23 | 2023-02-17 | 4.3 | 7.82 | 4.33 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 29.04 | 0.00 | 2.061 | 8.20 | 1.98 | 1.8 | 98.1 | 0.1 | 1.94 | 0.87 | 0.75 | — | 3.2 | 0.005 | 0.70 | 0.0 | 0.04 | 29.28 | 0.00 | 2.175 | 22.94 | 0.00 | 2.8 | 97.2 | 0.0 | 0.84 | 1.95 | 0.88 | 0.80 | — | 14067 | 902 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 8G8E | 29846 | 2023-04-19 | 2023-02-17 | 4.2 | 7.38 | 5.01 | 5.9 | 0.004 | 0.73 | 0.0 | 0.04 | 28.65 | 0.00 | 2.277 | 15.90 | 0.79 | 1.5 | 98.5 | 0.0 | 0.35 | 0.81 | 0.66 | — | 6.0 | 0.003 | 0.63 | 0.0 | 0.03 | 28.39 | 0.00 | 2.243 | 15.67 | 0.00 | 2.9 | 97.1 | 0.0 | -0.23 | 1.84 | 0.91 | 0.85 | — | 2464 | 140 | 3 | 64 | 0 | 0 | 0 | logfile |
✔ | 8CK1 | 16689 | 2023-04-22 | 2023-02-14 | 3.9 | 3.75 | 3.90 | 3.8 | 0.004 | 0.75 | 0.0 | 0.05 | 16.95 | 0.00 | 2.200 | 15.75 | 0.59 | 8.4 | 91.6 | 0.0 | -2.07 | 0.42 | 0.81 | 1.48 | 3.8 | 0.003 | 0.70 | 0.0 | 0.05 | 17.90 | 0.00 | 2.215 | 14.33 | 0.30 | 9.0 | 91.0 | 0.0 | -1.64 | 0.55 | 0.42 | 0.81 | 1.82 | 12580 | 1616 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CK0 | 16688 | 2023-04-20 | 2023-02-14 | 3.8 | 3.83 | 3.70 | 3.8 | 0.005 | 0.80 | 0.0 | 0.05 | 16.63 | 0.01 | 2.259 | 15.81 | 0.00 | 5.3 | 94.7 | 0.0 | 0.79 | 0.17 | 0.78 | 1.47 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 17.61 | 0.00 | 2.237 | 10.99 | 0.24 | 4.0 | 96.0 | 0.0 | 2.20 | 0.72 | 0.18 | 0.78 | 1.71 | 3762 | 478 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iD8 | 35359 | 2023-04-20 | 2023-02-12 | 3.0 | 3.25 | 3.12 | 3.3 | 0.004 | 0.66 | 0.0 | 0.04 | 13.18 | 0.00 | 1.393 | 8.92 | 0.33 | 3.3 | 96.7 | 0.0 | -0.43 | 0.67 | 0.78 | 2.54 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 15.71 | 0.00 | 2.175 | 7.16 | 2.77 | 3.0 | 97.0 | 0.0 | 0.47 | 0.41 | 0.62 | 0.78 | 2.33 | 8635 | 1137 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iD6 | 35358 | 2023-04-21 | 2023-02-12 | 2.8 | 2.99 | 2.85 | 3.0 | 0.004 | 0.67 | 0.0 | 0.05 | 11.40 | 0.01 | 2.180 | 7.91 | 0.00 | 0.7 | 99.3 | 0.0 | 0.86 | 0.68 | 0.81 | 3.66 | 3.0 | 0.002 | 0.58 | 0.0 | 0.04 | 14.24 | 0.00 | 2.134 | 4.79 | 1.52 | 2.1 | 97.9 | 0.0 | 1.31 | 0.52 | 0.67 | 0.83 | 3.38 | 8727 | 1139 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8G59 | 29736 | 2023-04-20 | 2023-02-12 | 2.64 | 2.58 | — | 2.9 | 0.005 | 0.76 | 1.0 | 0.05 | 12.18 | 0.01 | 1.930 | 10.26 | 0.22 | 3.8 | 96.1 | 0.1 | -0.15 | 0.82 | 0.76 | 2.19 | 2.9 | 0.007 | 0.75 | 0.0 | 0.05 | 15.37 | 0.01 | 2.117 | 10.26 | 1.32 | 4.4 | 95.6 | 0.0 | 0.52 | 0.50 | 0.82 | 0.80 | 1.87 | 8583 | 1118 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iD9 | 35360 | 2023-04-20 | 2023-02-12 | 3.0 | 3.00 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.05 | 13.95 | 0.02 | 2.182 | 9.55 | 0.13 | 2.7 | 97.3 | 0.0 | -0.21 | 0.88 | 0.84 | 3.28 | 2.9 | 0.005 | 0.65 | 0.0 | 0.04 | 14.91 | 0.00 | 2.166 | 6.84 | 1.56 | 4.0 | 96.0 | 0.0 | 0.29 | 1.80 | 0.89 | 0.87 | 3.28 | 7996 | 1095 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iD3 | 35356 | 2023-04-21 | 2023-02-12 | 3.1 | 3.38 | 3.17 | 3.3 | 0.005 | 0.87 | 0.0 | 0.05 | 14.38 | 0.01 | 2.199 | 8.84 | 0.76 | 3.9 | 96.1 | 0.0 | -1.42 | 0.65 | 0.79 | 3.03 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 14.82 | 0.00 | 2.208 | 6.41 | 0.33 | 3.2 | 96.8 | 0.0 | 0.26 | 0.41 | 0.65 | 0.80 | 2.55 | 8742 | 1141 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iD4 | 35357 | 2023-04-20 | 2023-02-12 | 3.1 | 3.26 | 3.09 | 3.2 | 0.004 | 0.73 | 1.0 | 0.05 | 12.92 | 0.01 | 2.217 | 8.68 | 0.22 | 3.7 | 96.1 | 0.2 | -1.06 | 0.65 | 0.79 | 3.25 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 14.62 | 0.00 | 2.216 | 6.35 | 0.11 | 3.2 | 96.8 | 0.0 | 0.27 | 0.35 | 0.67 | 0.82 | 2.83 | 8665 | 1134 | 6 | 0 | 1 | 1 | 0 | logfile |
✔ | 8G46 | 29714 | 2023-04-20 | 2023-02-08 | 2.2 | 2.34 | 2.28 | 2.4 | 0.009 | 0.98 | 0.0 | 0.06 | 15.92 | 0.01 | 2.207 | 6.43 | 1.70 | 3.0 | 97.0 | 0.0 | -0.25 | 0.54 | 0.79 | 4.41 | 2.4 | 0.003 | 0.65 | 0.0 | 0.04 | 16.36 | 0.00 | 2.128 | 5.78 | 1.27 | 2.7 | 97.3 | 0.0 | 0.07 | 0.27 | 0.62 | 0.83 | 4.26 | 8603 | 1064 | 7 | 0 | 2 | 110 | 0 | logfile |
✔ | 8CEo | 16611 | 2023-04-21 | 2023-02-02 | 3.6 | 3.26 | 3.48 | 2.9 | 0.004 | 0.75 | 1.0 | 0.05 | 16.34 | 0.01 | 2.091 | 6.70 | 0.00 | 2.9 | 97.1 | 0.0 | -0.68 | 0.73 | 0.56 | 1.54 | 2.9 | 0.004 | 0.65 | 0.0 | 0.04 | 17.74 | 0.00 | 1.928 | 14.28 | 0.16 | 3.1 | 96.9 | 0.0 | 0.59 | 0.66 | 0.68 | 0.52 | 1.48 | 113584 | 13074 | 66 | 418 | 19 | 0 | 0 | logfile |
✔ | 8G0C | 29653 | 2023-04-25 | 2023-01-31 | 2.8 | 3.69 | 2.84 | 2.8 | 0.005 | 0.85 | 0.0 | 0.17 | 6.80 | 0.00 | 1.814 | 0.39 | 0.00 | 2.6 | 97.3 | 0.0 | 0.98 | 0.69 | 0.67 | — | 2.8 | 0.006 | 0.79 | 0.0 | 0.07 | 5.95 | 0.00 | 1.778 | 2.08 | 0.00 | 9.1 | 90.9 | 0.0 | 0.66 | 1.21 | 0.79 | 0.80 | — | 19874 | 4860 | 30 | 0 | 16 | 0 | 0 | logfile |
✔ | 8G0B | 29652 | 2023-04-20 | 2023-01-31 | 2.8 | 2.96 | 2.80 | 3.0 | 0.007 | 1.12 | 0.0 | 0.04 | 14.68 | 0.00 | 2.221 | 7.63 | 0.14 | 2.9 | 97.1 | 0.0 | 0.73 | 0.67 | 0.83 | 2.51 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 15.63 | 0.01 | 2.111 | 11.64 | 1.29 | 2.4 | 97.6 | 0.0 | 1.21 | 0.39 | 0.66 | 0.85 | 1.86 | 7758 | 1044 | 19 | 0 | 7 | 0 | 0 | logfile |
✔ | 8G0D | 29654 | 2023-04-25 | 2023-01-31 | 2.9 | 3.84 | 3.02 | 2.9 | 0.005 | 0.87 | 0.0 | 0.18 | 6.79 | 0.00 | 1.844 | 0.67 | 0.00 | 2.6 | 97.3 | 0.0 | 0.74 | 0.68 | 0.65 | — | 2.9 | 0.004 | 0.76 | 0.0 | 0.08 | 6.41 | 0.00 | 1.793 | 2.47 | 0.00 | 7.3 | 92.7 | 0.0 | 0.44 | 1.63 | 0.80 | 0.81 | — | 19874 | 4860 | 30 | 0 | 16 | 0 | 0 | logfile |
✔ | 8G09 | 29650 | 2023-04-25 | 2023-01-31 | 3.1 | 3.88 | 3.23 | 3.2 | 0.005 | 0.71 | 0.0 | 0.23 | 5.31 | 0.00 | 1.766 | 0.75 | 0.00 | 3.1 | 96.9 | 0.0 | 0.54 | 0.74 | 0.70 | — | 3.4 | 0.009 | 1.01 | 0.0 | 0.07 | 6.67 | 0.01 | 1.686 | 8.59 | 0.00 | 13.5 | 86.5 | 0.0 | -1.37 | 0.75 | 0.82 | 0.82 | — | 19599 | 4860 | 26 | 0 | 10 | 0 | 0 | logfile |