Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9GAW	13931	2025-01-21	2024-07-29	2.9	2.23	2.97	2.7	0.004	0.70	0.0	0.04	15.06	0.00	2.198	11.60	0.78	3.1	96.8	0.0	1.23	0.79	0.79	2.07	2.0	0.003	0.65	0.0	0.04	17.49	0.00	2.342	9.16	2.94	2.9	97.0	0.0	1.33	0.56	0.79	0.81	2.28	66640	8600	24	0	6	0	0	logfile
✔	9iXX	60980	2025-06-07	2024-07-29	3.15	3.09	2.95	3.2	0.008	0.65	0.0	0.04	9.06	0.00	1.977	7.09	0.30	1.6	98.4	0.0	-1.89	0.41	0.57	1.04	3.2	0.003	0.60	0.0	0.04	13.94	0.00	2.444	6.37	2.54	3.4	96.6	0.0	0.24	0.96	0.58	0.80	2.47	9036	1141	6	0	1	0	0	logfile
✔	9GAW	13931	2024-12-31	2024-07-29	2.9	2.23	2.97	2.7	0.004	0.70	0.0	0.04	15.06	0.00	2.198	11.60	0.78	3.1	96.8	0.0	1.23	0.79	0.79	2.07	2.0	0.005	0.79	3.0	0.04	17.45	0.00	2.142	10.80	3.08	3.1	96.9	0.0	1.32	0.55	0.79	0.81	2.24	66640	8600	24	0	6	0	0	logfile
✔	9iXX	60980	2025-05-12	2024-07-29	3.15	3.09	2.95	3.2	0.008	0.65	0.0	0.04	9.06	0.00	1.977	7.09	0.30	1.6	98.4	0.0	-1.89	0.41	0.57	1.04	3.2	0.003	0.61	0.0	0.04	14.00	0.00	2.483	6.98	3.15	3.1	96.9	0.0	0.26	0.96	0.58	0.80	2.49	9036	1141	6	0	1	0	0	logfile
✔	9CV7	45957	2025-06-13	2024-07-28	3.8	4.16	3.75	3.8	0.006	1.18	0.0	0.06	16.81	0.01	2.141	5.77	0.42	5.0	95.0	0.0	-1.36	0.76	0.71	0.85	3.8	0.004	0.83	0.0	0.05	17.33	0.00	2.409	15.64	4.34	4.6	95.4	0.0	-0.72	1.56	0.77	0.74	1.22	15291	1863	12	0	42	0	0	logfile
✔	9CV6	45956	2024-12-30	2024-07-28	3.12	3.70	3.15	3.6	0.004	0.85	0.0	0.06	11.33	0.01	2.314	3.62	0.00	2.3	97.7	0.0	-1.51	0.87	0.87	4.36	3.5	0.003	0.59	0.0	0.04	13.88	0.00	2.499	4.29	0.79	2.6	97.4	0.0	0.88	1.13	0.84	0.89	3.13	12030	1520	2	0	0	0	0	logfile
✔	9CV6	45956	2024-11-16	2024-07-28	3.12	3.70	3.15	3.6	0.004	0.85	0.0	0.06	11.33	0.01	2.314	3.62	0.00	2.3	97.7	0.0	-1.51	0.87	0.87	4.36	3.5	0.003	0.59	0.0	0.04	13.88	0.00	2.499	4.29	0.79	2.6	97.4	0.0	0.88	1.13	0.84	0.89	3.13	12030	1520	2	0	0	0	0	logfile
✔	9CV6	45956	2024-10-12	2024-07-28	3.12	3.70	3.15	3.6	0.004	0.85	0.0	0.06	11.33	0.01	2.314	3.62	0.00	2.3	97.7	0.0	-1.51	0.87	0.87	4.36	3.5	0.003	0.59	0.0	0.04	13.88	0.00	2.499	4.29	0.79	2.6	97.4	0.0	0.88	1.13	0.84	0.89	3.13	12030	1520	2	0	0	0	0	logfile
✔	9CV6	45956	2025-06-11	2024-07-28	3.12	3.70	3.15	3.6	0.004	0.85	0.0	0.06	11.33	0.01	2.314	3.62	0.00	2.3	97.7	0.0	-1.51	0.87	0.87	4.36	3.5	0.003	0.57	0.0	0.04	13.61	0.00	2.507	4.62	0.40	2.9	97.1	0.0	1.05	1.12	0.84	0.89	3.04	12030	1520	2	0	0	0	0	logfile
✔	9CV6	45956	2025-05-14	2024-07-28	3.12	3.70	3.15	3.6	0.004	0.85	0.0	0.06	11.33	0.01	2.314	3.62	0.00	2.3	97.7	0.0	-1.51	0.87	0.87	4.36	3.5	0.003	0.58	0.0	0.04	13.70	0.00	2.511	4.29	0.79	2.8	97.2	0.0	0.98	1.13	0.84	0.88	3.17	12030	1520	2	0	0	0	0	logfile
✔	9CV6	45956	2025-01-18	2024-07-28	3.12	3.70	3.15	3.6	0.004	0.85	0.0	0.06	11.33	0.01	2.314	3.62	0.00	2.3	97.7	0.0	-1.51	0.87	0.87	4.36	3.5	0.003	0.58	0.0	0.04	13.70	0.00	2.511	4.29	0.79	2.8	97.2	0.0	0.98	1.13	0.84	0.88	3.17	12030	1520	2	0	0	0	0	logfile
✔	9GA3	51170	2025-06-16	2024-07-26	4.3	8.47	4.38	4.2	0.004	0.72	0.0	0.04	19.76	0.01	2.224	15.69	1.97	8.4	91.6	0.0	-1.90	0.90	0.78	—	4.3	0.004	0.74	0.0	0.04	18.61	0.01	2.405	25.44	0.00	7.4	92.6	0.0	-1.09	1.18	0.90	0.78	—	18691	2207	7	79	7	0	0	logfile
✔	9GA3	51170	2025-05-19	2024-07-26	4.3	8.47	4.38	4.2	0.004	0.72	0.0	0.04	19.76	0.01	2.224	15.69	1.97	8.4	91.6	0.0	-1.90	0.90	0.78	—	4.3	0.004	0.79	0.0	0.05	18.65	0.01	2.359	31.01	0.00	8.5	91.5	0.0	-1.39	1.73	0.90	0.78	—	18691	2207	7	79	7	0	0	logfile
✔	9GA5	51174	2025-06-12	2024-07-26	3.2	4.30	3.30	3.6	0.004	0.84	1.0	0.05	20.06	0.00	1.844	17.70	0.23	5.6	94.4	0.0	-0.04	0.91	0.86	1.31	3.6	0.004	0.76	0.0	0.04	20.72	0.00	2.452	11.97	2.15	5.9	94.1	0.0	0.02	0.36	0.91	0.87	1.05	13715	1594	6	71	6	0	0	logfile
✔	9GA5	51174	2025-05-16	2024-07-26	3.2	4.30	3.30	3.6	0.004	0.84	1.0	0.05	20.06	0.00	1.844	17.70	0.23	5.6	94.4	0.0	-0.04	0.91	0.86	1.31	3.6	0.004	0.73	0.0	0.04	20.62	0.00	2.468	11.22	2.07	5.8	94.2	0.0	0.16	0.36	0.91	0.87	1.15	13715	1594	6	71	6	0	0	logfile
✘	9CUJ	45935	2025-01-24	2024-07-26	2.78	2.95	2.81	3.0	0.011	1.39	0.0	0.05	17.60	0.01	2.291	5.23	1.51	4.3	95.7	0.0	-5.66	0.60	0.82	4.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21557	2440	12	0	65	72	0	logfile
✘	9CUJ	45935	2025-05-21	2024-07-26	2.78	2.95	2.81	3.0	0.011	1.39	0.0	0.05	17.60	0.01	2.291	5.23	1.51	4.3	95.7	0.0	-5.66	0.60	0.82	4.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21557	2440	12	0	65	72	0	logfile
✔	9CUJ	45935	2025-06-18	2024-07-26	2.78	2.95	2.81	3.0	0.011	1.39	0.0	0.05	17.60	0.01	2.291	5.23	1.51	4.3	95.7	0.0	-5.66	0.60	0.82	4.84	3.0	0.002	0.60	0.0	0.04	16.99	0.00	2.356	6.55	1.51	3.0	97.0	0.0	1.00	0.56	0.62	0.85	3.45	21557	2440	12	0	65	72	0	logfile
✔	9CUK	45936	2025-06-19	2024-07-26	3.26	3.55	3.38	3.6	0.013	1.37	0.0	0.06	16.40	0.01	2.269	4.36	0.44	10.0	89.7	0.3	-6.36	0.64	0.82	3.52	3.6	0.004	0.72	0.0	0.04	16.19	0.00	2.242	6.59	2.71	9.4	90.5	0.2	-0.27	1.13	0.65	0.85	2.68	22531	2635	11	0	62	1	0	logfile
✔	9CUH	45933	2025-01-23	2024-07-26	3.03	3.20	3.06	3.2	0.014	1.53	0.0	0.06	17.81	0.01	2.295	4.45	1.16	6.3	93.5	0.2	-5.89	0.68	0.83	4.17	3.2	0.002	0.62	0.0	0.04	16.05	0.00	2.429	6.21	1.11	3.9	96.1	0.0	0.47	0.59	0.73	0.86	2.47	20877	2376	12	0	49	72	0	logfile

• ← previous
• Page 101 of 5208
• next →