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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9BH9 | 44537 | 2024-08-05 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.76 | 0.00 | 2.524 | 6.81 | 1.47 | 1.9 | 98.1 | 0.0 | 0.87 | 2.06 | 0.74 | 0.76 | 1.60 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-07-21 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 17.61 | 0.00 | 2.205 | 7.95 | 1.92 | 2.2 | 97.8 | 0.0 | 0.82 | 1.87 | 0.74 | 0.77 | 1.48 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-06-27 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 17.61 | 0.00 | 2.205 | 7.95 | 1.92 | 2.2 | 97.8 | 0.0 | 0.82 | 1.87 | 0.74 | 0.77 | 1.48 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2025-01-19 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 17.72 | 0.00 | 2.467 | 6.92 | 1.55 | 2.1 | 97.9 | 0.0 | 0.73 | 2.06 | 0.74 | 0.76 | 1.53 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-12-30 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.76 | 0.00 | 2.524 | 6.81 | 1.47 | 1.9 | 98.1 | 0.0 | 0.87 | 2.06 | 0.74 | 0.76 | 1.60 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-11-17 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.76 | 0.00 | 2.524 | 6.81 | 1.47 | 1.9 | 98.1 | 0.0 | 0.87 | 2.06 | 0.74 | 0.76 | 1.60 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-10-12 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.76 | 0.00 | 2.524 | 6.81 | 1.47 | 1.9 | 98.1 | 0.0 | 0.87 | 2.06 | 0.74 | 0.76 | 1.60 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 9BH9 | 44537 | 2024-09-26 | 2024-04-19 | 3.5 | 3.53 | 3.42 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.03 | 0.01 | 2.362 | 1.75 | 0.07 | 0.6 | 99.4 | 0.0 | -2.11 | 0.72 | 0.76 | 2.80 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.76 | 0.00 | 2.524 | 6.81 | 1.47 | 1.9 | 98.1 | 0.0 | 0.87 | 2.06 | 0.74 | 0.76 | 1.60 | 13155 | 1574 | 4 | 50 | 0 | 0 | 0 | logfile |
✔ | 8Z74 | 39810 | 2025-02-11 | 2024-04-19 | 3.01 | 2.28 | 3.02 | 2.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.94 | 0.00 | 2.235 | 13.45 | 0.00 | 3.9 | 96.1 | 0.0 | 0.52 | 0.73 | 0.74 | 2.84 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 15.17 | 0.00 | 2.558 | 10.41 | 2.78 | 3.2 | 96.8 | 0.0 | 0.52 | 0.27 | 0.71 | 0.73 | 2.95 | 6709 | 847 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 8Z74 | 39810 | 2025-03-11 | 2024-04-19 | 3.01 | 2.28 | 3.02 | 2.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.94 | 0.00 | 2.235 | 13.45 | 0.00 | 3.9 | 96.1 | 0.0 | 0.52 | 0.73 | 0.74 | 2.84 | 2.1 | 0.003 | 0.65 | 0.0 | 0.04 | 15.21 | 0.00 | 2.513 | 10.48 | 2.64 | 3.3 | 96.7 | 0.0 | 0.46 | 0.28 | 0.73 | 0.75 | 2.86 | 6709 | 847 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-08-05 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.09 | 0.00 | 2.534 | 6.56 | 2.32 | 2.0 | 98.0 | 0.0 | 1.96 | 2.04 | 0.83 | 0.79 | 1.12 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH8 | 44536 | 2024-09-26 | 2024-04-19 | 3.6 | 3.61 | 3.50 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.01 | 2.310 | 1.53 | 0.15 | 0.7 | 99.3 | 0.0 | -2.28 | 0.74 | 0.75 | 2.34 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 17.65 | 0.00 | 2.439 | 7.50 | 1.84 | 1.9 | 98.1 | 0.0 | 0.55 | 1.22 | 0.76 | 0.76 | 1.40 | 13051 | 1574 | 4 | 44 | 0 | 0 | 0 | logfile |
✔ | 9BH8 | 44536 | 2025-01-19 | 2024-04-19 | 3.6 | 3.61 | 3.50 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.01 | 2.310 | 1.53 | 0.15 | 0.7 | 99.3 | 0.0 | -2.28 | 0.74 | 0.75 | 2.34 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 17.55 | 0.00 | 2.504 | 6.74 | 1.47 | 2.1 | 97.9 | 0.0 | 0.60 | 1.23 | 0.76 | 0.76 | 1.40 | 13051 | 1574 | 4 | 44 | 0 | 0 | 0 | logfile |
✔ | 9BH8 | 44536 | 2024-06-27 | 2024-04-19 | 3.6 | 3.61 | 3.50 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.01 | 2.310 | 1.53 | 0.15 | 0.7 | 99.3 | 0.0 | -2.28 | 0.74 | 0.75 | 2.34 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 17.54 | 0.00 | 2.156 | 9.76 | 1.84 | 2.2 | 97.8 | 0.0 | 0.84 | 1.23 | 0.76 | 0.76 | 1.46 | 13051 | 1574 | 4 | 44 | 0 | 0 | 0 | logfile |
✔ | 9BH8 | 44536 | 2024-07-21 | 2024-04-19 | 3.6 | 3.61 | 3.50 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.01 | 2.310 | 1.53 | 0.15 | 0.7 | 99.3 | 0.0 | -2.28 | 0.74 | 0.75 | 2.34 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 17.54 | 0.00 | 2.156 | 9.76 | 1.84 | 2.2 | 97.8 | 0.0 | 0.84 | 1.23 | 0.76 | 0.76 | 1.46 | 13051 | 1574 | 4 | 44 | 0 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-12-30 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.09 | 0.00 | 2.534 | 6.56 | 2.32 | 2.0 | 98.0 | 0.0 | 1.96 | 2.04 | 0.83 | 0.79 | 1.12 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-11-16 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.09 | 0.00 | 2.534 | 6.56 | 2.32 | 2.0 | 98.0 | 0.0 | 1.96 | 2.04 | 0.83 | 0.79 | 1.12 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-10-12 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.09 | 0.00 | 2.534 | 6.56 | 2.32 | 2.0 | 98.0 | 0.0 | 1.96 | 2.04 | 0.83 | 0.79 | 1.12 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-09-26 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.09 | 0.00 | 2.534 | 6.56 | 2.32 | 2.0 | 98.0 | 0.0 | 1.96 | 2.04 | 0.83 | 0.79 | 1.12 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9BH7 | 44535 | 2024-07-20 | 2024-04-19 | 3.5 | 3.43 | 3.54 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 12.66 | 0.01 | 2.370 | 1.58 | 0.00 | 0.7 | 99.2 | 0.1 | -1.16 | 0.83 | 0.78 | 2.21 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 15.81 | 0.00 | 2.192 | 7.98 | 2.32 | 2.1 | 97.9 | 0.0 | 2.05 | 2.05 | 0.83 | 0.78 | 0.89 | 12166 | 1544 | 2 | 0 | 0 | 0 | 0 | logfile |