Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9JNP	61624	2025-08-23	2024-09-23	2.3	3.23	2.38	2.9	0.008	0.75	0.0	0.04	26.69	0.01	2.067	7.38	1.45	3.8	96.2	0.0	0.83	0.87	0.86	3.01	2.9	0.004	0.58	0.0	0.04	26.08	0.00	2.078	6.66	1.45	3.0	97.0	0.0	2.18	0.29	0.87	0.87	2.93	15781	1221	12	292	2	0	0	logfile
✔	9JNP	61624	2025-06-13	2024-09-23	2.3	3.23	2.38	2.9	0.008	0.75	0.0	0.04	26.69	0.01	2.067	7.38	1.45	3.8	96.2	0.0	0.83	0.87	0.86	3.01	2.9	0.006	0.61	0.0	0.04	26.28	0.00	2.072	5.56	1.83	2.9	97.1	0.0	1.91	0.28	0.88	0.87	3.03	15781	1221	12	292	2	0	0	logfile
✔	9JNP	61624	2025-05-17	2024-09-23	2.3	3.23	2.38	2.9	0.008	0.75	0.0	0.04	26.69	0.01	2.067	7.38	1.45	3.8	96.2	0.0	0.83	0.87	0.86	3.01	2.9	0.006	0.61	0.0	0.04	26.21	0.00	2.074	5.66	2.22	2.9	97.1	0.0	2.06	0.29	0.88	0.87	3.07	15781	1221	12	292	2	0	0	logfile
✘	9JN9	61620	2025-07-31	2024-09-23	3.36	2.41	3.22	2.2	0.010	1.02	2.0	0.06	16.72	0.01	2.280	5.91	0.99	10.4	89.4	0.1	-4.81	0.69	0.63	2.00	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13552	1692	4	0	2	0	0	logfile
✘	9DPL	47106	2025-05-19	2024-09-22	2.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10555	1092	10	76	6	0	0	logfile
✘	9DPL	47106	2025-08-24	2024-09-22	2.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10555	1092	10	76	6	0	0	logfile
✘	9DPL	47106	2025-06-16	2024-09-22	2.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10555	1092	10	76	6	0	0	logfile
✔	9GV5	51624	2025-07-24	2024-09-22	4.0	4.59	4.06	4.6	0.002	0.52	0.0	0.04	11.20	0.00	2.306	5.31	0.35	6.9	93.1	0.0	0.71	0.63	0.60	—	4.6	0.003	0.60	0.0	0.04	14.40	0.00	2.264	9.15	0.70	8.6	91.4	0.0	0.44	0.89	0.62	0.61	—	5465	355	1	0	0	0	2766	logfile
✔	9GV5	51624	2025-08-22	2024-09-22	4.0	4.59	4.06	4.6	0.002	0.52	0.0	0.04	11.20	0.00	2.306	5.31	0.35	6.9	93.1	0.0	0.71	0.63	0.60	—	4.6	0.003	0.58	0.0	0.04	14.28	0.00	2.286	7.14	1.05	7.7	92.3	0.0	0.55	0.97	0.61	0.61	—	5465	355	1	0	0	0	2766	logfile
✔	9GV5	51624	2025-06-05	2024-09-22	4.0	4.59	4.06	4.6	0.002	0.52	0.0	0.04	11.20	0.00	2.306	5.31	0.35	6.9	93.1	0.0	0.71	0.63	0.60	—	4.6	0.003	0.60	0.0	0.04	14.40	0.00	2.264	9.15	0.70	8.6	91.4	0.0	0.44	0.89	0.62	0.61	—	5465	355	1	0	0	0	2766	logfile
✔	9JMZ	61616	2025-07-30	2024-09-22	2.91	4.17	2.98	3.5	0.004	0.90	0.0	0.05	14.15	0.00	2.176	5.57	0.78	3.7	96.3	0.0	0.45	0.92	0.90	3.46	3.5	0.003	0.66	0.0	0.04	14.25	0.00	2.494	3.65	1.25	3.7	96.3	0.0	0.30	0.76	0.92	0.90	3.59	12001	1459	12	0	22	0	0	logfile
✔	9JN0	61617	2025-06-10	2024-09-22	2.84	3.91	2.92	3.4	0.003	0.71	0.0	0.05	14.14	0.00	2.199	4.38	0.70	3.5	96.5	0.0	0.44	0.90	0.89	3.49	3.4	0.002	0.63	0.0	0.04	14.12	0.00	2.532	3.19	1.17	3.9	96.1	0.0	0.45	0.29	0.90	0.89	3.59	12001	1459	11	0	22	0	0	logfile
✔	9JMZ	61616	2025-05-14	2024-09-22	2.91	4.17	2.98	3.5	0.004	0.90	0.0	0.05	14.15	0.00	2.176	5.57	0.78	3.7	96.3	0.0	0.45	0.92	0.90	3.46	3.5	0.003	0.66	0.0	0.04	14.25	0.00	2.500	3.74	1.32	3.8	96.2	0.0	0.33	0.76	0.92	0.90	3.54	12001	1459	12	0	22	0	0	logfile
✔	9JN0	61617	2025-07-30	2024-09-22	2.84	3.91	2.92	3.4	0.003	0.71	0.0	0.05	14.14	0.00	2.199	4.38	0.70	3.5	96.5	0.0	0.44	0.90	0.89	3.49	3.4	0.002	0.63	0.0	0.04	14.12	0.00	2.532	3.19	1.17	3.9	96.1	0.0	0.45	0.29	0.90	0.89	3.59	12001	1459	11	0	22	0	0	logfile
✔	9JMZ	61616	2025-08-23	2024-09-22	2.91	4.17	2.98	3.5	0.004	0.90	0.0	0.05	14.15	0.00	2.176	5.57	0.78	3.7	96.3	0.0	0.45	0.92	0.90	3.46	3.5	0.003	0.67	0.0	0.04	14.14	0.00	2.475	3.57	1.32	3.5	96.5	0.0	0.34	0.76	0.92	0.90	3.33	12001	1459	12	0	22	0	0	logfile
✔	9JMZ	61616	2025-06-10	2024-09-22	2.91	4.17	2.98	3.5	0.004	0.90	0.0	0.05	14.15	0.00	2.176	5.57	0.78	3.7	96.3	0.0	0.45	0.92	0.90	3.46	3.5	0.003	0.66	0.0	0.04	14.25	0.00	2.494	3.65	1.25	3.7	96.3	0.0	0.30	0.76	0.92	0.90	3.59	12001	1459	12	0	22	0	0	logfile
✔	9JN0	61617	2025-05-14	2024-09-22	2.84	3.91	2.92	3.4	0.003	0.71	0.0	0.05	14.14	0.00	2.199	4.38	0.70	3.5	96.5	0.0	0.44	0.90	0.89	3.49	3.4	0.003	0.64	0.0	0.04	14.14	0.00	2.529	3.02	1.09	5.2	94.8	0.0	0.38	0.30	0.90	0.89	3.67	12001	1459	11	0	22	0	0	logfile
✔	9JN0	61617	2025-08-23	2024-09-22	2.84	3.91	2.92	3.4	0.003	0.71	0.0	0.05	14.14	0.00	2.199	4.38	0.70	3.5	96.5	0.0	0.44	0.90	0.89	3.49	3.4	0.003	0.64	0.0	0.04	14.08	0.00	2.488	3.02	1.25	4.3	95.7	0.0	0.40	0.29	0.90	0.89	3.63	12001	1459	11	0	22	0	0	logfile
✔	9DPE	47104	2025-07-30	2024-09-21	3.86	4.57	3.79	3.9	0.002	0.45	0.0	0.04	7.39	0.00	2.119	3.63	0.15	1.8	98.2	0.0	1.23	0.86	0.79	2.16	3.9	0.003	0.56	0.0	0.04	11.04	0.00	2.386	5.65	1.51	3.8	96.2	0.0	0.02	0.83	0.87	0.81	2.46	11800	779	5	0	4	0	5786	logfile
✔	9DPE	47104	2025-08-23	2024-09-21	3.86	4.57	3.79	3.9	0.002	0.45	0.0	0.04	7.39	0.00	2.119	3.63	0.15	1.8	98.2	0.0	1.23	0.86	0.79	2.16	3.9	0.004	0.60	0.0	0.04	11.04	0.00	2.399	7.93	1.66	5.2	94.8	0.0	-0.28	1.34	0.87	0.81	2.51	11800	779	5	0	4	0	5786	logfile

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