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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9CHQ | 45598 | 2025-05-19 | 2024-07-01 | 3.0 | 2.94 | 3.00 | 3.2 | 0.013 | 1.73 | 4.0 | 0.09 | 11.63 | 0.02 | 2.549 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -0.39 | 0.51 | 0.78 | 3.82 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.04 | 0.00 | 2.479 | 1.94 | 1.57 | 1.9 | 98.1 | 0.0 | 2.64 | 1.72 | 0.49 | 0.77 | 3.35 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHP | 45597 | 2024-11-19 | 2024-07-01 | 3.3 | 3.33 | 3.28 | 3.4 | 0.013 | 1.75 | 0.0 | 0.09 | 11.61 | 0.02 | 2.568 | 0.00 | 0.00 | 1.8 | 98.2 | 0.0 | -0.91 | 0.53 | 0.78 | 3.14 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 15.49 | 0.00 | 2.433 | 1.73 | 1.18 | 4.9 | 95.1 | 0.0 | 2.07 | 1.28 | 0.52 | 0.78 | 2.96 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHQ | 45598 | 2025-01-22 | 2024-07-01 | 3.0 | 2.94 | 3.01 | 3.2 | 0.013 | 1.73 | 4.0 | 0.09 | 11.63 | 0.02 | 2.549 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -0.39 | 0.51 | 0.78 | 3.82 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.04 | 0.00 | 2.479 | 1.94 | 1.57 | 1.9 | 98.1 | 0.0 | 2.64 | 1.72 | 0.49 | 0.77 | 3.35 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHM | 45590 | 2025-05-11 | 2024-07-01 | 3.47 | 4.54 | 3.49 | 4.2 | 0.004 | 0.82 | 0.0 | 0.04 | 16.49 | 0.00 | 2.176 | 16.62 | 0.35 | 5.8 | 94.2 | 0.0 | -0.84 | 0.74 | 0.84 | 1.33 | 4.2 | 0.006 | 0.86 | 0.0 | 0.05 | 17.11 | 0.00 | 2.499 | 15.22 | 4.49 | 6.5 | 93.5 | 0.0 | -1.00 | 1.78 | 0.73 | 0.85 | 1.09 | 7498 | 967 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHM | 45590 | 2025-06-06 | 2024-07-01 | 3.47 | 4.54 | 3.49 | 4.2 | 0.004 | 0.82 | 0.0 | 0.04 | 16.49 | 0.00 | 2.176 | 16.62 | 0.35 | 5.8 | 94.2 | 0.0 | -0.84 | 0.74 | 0.84 | 1.33 | 4.1 | 0.004 | 0.75 | 0.0 | 0.04 | 17.24 | 0.00 | 2.525 | 12.03 | 3.78 | 5.3 | 94.7 | 0.0 | -0.72 | 1.77 | 0.73 | 0.84 | 1.38 | 7498 | 967 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHM | 45590 | 2025-03-12 | 2024-07-01 | 3.47 | 4.54 | 3.49 | 4.2 | 0.004 | 0.82 | 0.0 | 0.04 | 16.49 | 0.00 | 2.176 | 16.62 | 0.35 | 5.8 | 94.2 | 0.0 | -0.84 | 0.74 | 0.84 | 1.33 | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 17.13 | 0.00 | 2.523 | 10.90 | 4.72 | 5.0 | 95.0 | 0.0 | -0.74 | 1.77 | 0.73 | 0.84 | 1.33 | 7498 | 967 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHM | 45590 | 2025-04-28 | 2024-07-01 | 3.47 | 4.54 | 3.49 | 4.2 | 0.004 | 0.82 | 0.0 | 0.04 | 16.49 | 0.00 | 2.176 | 16.62 | 0.35 | 5.8 | 94.2 | 0.0 | -0.84 | 0.74 | 0.84 | 1.33 | 4.1 | 0.004 | 0.75 | 0.0 | 0.04 | 17.24 | 0.00 | 2.525 | 12.03 | 3.78 | 5.3 | 94.7 | 0.0 | -0.72 | 1.77 | 0.73 | 0.84 | 1.38 | 7498 | 967 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FX3 | 50842 | 2025-05-13 | 2024-07-01 | 3.2 | 3.90 | 3.46 | 3.7 | 0.005 | 0.92 | 0.0 | 0.06 | 14.83 | 0.01 | 2.280 | 4.31 | 0.57 | 2.5 | 97.5 | 0.0 | -0.71 | 0.80 | 0.79 | 2.49 | 3.7 | 0.003 | 0.56 | 0.0 | 0.04 | 14.81 | 0.00 | 2.537 | 5.99 | 2.84 | 2.4 | 97.6 | 0.0 | 0.97 | 1.35 | 0.84 | 0.85 | 2.76 | 9511 | 1178 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 9FX3 | 50842 | 2025-04-30 | 2024-07-01 | 3.2 | 3.90 | 3.46 | 3.7 | 0.005 | 0.92 | 0.0 | 0.06 | 14.83 | 0.01 | 2.280 | 4.31 | 0.57 | 2.5 | 97.5 | 0.0 | -0.71 | 0.80 | 0.79 | 2.49 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 14.83 | 0.00 | 2.541 | 5.94 | 2.84 | 2.1 | 97.9 | 0.0 | 1.15 | 1.34 | 0.84 | 0.84 | 2.67 | 9511 | 1178 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 9FX3 | 50842 | 2025-06-08 | 2024-07-01 | 3.2 | 3.90 | 3.46 | 3.7 | 0.005 | 0.92 | 0.0 | 0.06 | 14.83 | 0.01 | 2.280 | 4.31 | 0.57 | 2.5 | 97.5 | 0.0 | -0.71 | 0.80 | 0.79 | 2.49 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 14.83 | 0.00 | 2.541 | 5.94 | 2.84 | 2.1 | 97.9 | 0.0 | 1.15 | 1.34 | 0.84 | 0.84 | 2.67 | 9511 | 1178 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 9CGZ | 45589 | 2024-10-10 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2024-11-14 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2025-06-06 | 2024-07-01 | 2.69 | 2.42 | 2.57 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.74 | 0.00 | 2.493 | 4.99 | 1.82 | 7.0 | 93.0 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.10 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2025-05-10 | 2024-07-01 | 2.69 | 2.42 | 2.57 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.65 | 0.0 | 0.05 | 17.79 | 0.00 | 2.481 | 5.13 | 1.56 | 7.7 | 92.3 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.02 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2025-04-28 | 2024-07-01 | 2.69 | 2.42 | 2.57 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.74 | 0.00 | 2.493 | 4.99 | 1.82 | 7.0 | 93.0 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.10 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2025-03-12 | 2024-07-01 | 2.69 | 2.42 | 2.57 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.74 | 0.00 | 2.493 | 4.99 | 1.82 | 7.0 | 93.0 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.10 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2025-02-12 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.65 | 0.0 | 0.05 | 17.79 | 0.00 | 2.481 | 5.13 | 1.56 | 7.7 | 92.3 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.02 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2025-01-14 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.65 | 0.0 | 0.05 | 17.79 | 0.00 | 2.481 | 5.13 | 1.56 | 7.7 | 92.3 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.02 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2024-12-27 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CGZ | 45589 | 2024-09-24 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |