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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9FT7 | 50741 | 2025-04-27 | 2024-06-24 | 3.16 | 3.67 | 3.16 | 3.5 | 0.006 | 0.67 | 0.0 | 0.04 | 11.56 | 0.01 | 2.317 | 1.26 | 0.00 | 1.2 | 98.8 | 0.0 | 1.52 | 0.61 | 0.86 | 5.08 | 3.5 | 0.003 | 0.45 | 0.0 | 0.03 | 13.12 | 0.00 | 2.650 | 1.89 | 2.02 | 1.6 | 98.4 | 0.0 | 5.00 | 0.28 | 0.52 | 0.81 | 3.73 | 4016 | 516 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 9CDB | 45466 | 2025-05-26 | 2024-06-24 | 3.6 | 4.64 | 3.64 | 3.7 | 0.007 | 0.75 | 0.0 | 0.04 | 18.81 | 0.01 | 1.971 | 13.17 | 0.52 | 5.6 | 94.2 | 0.2 | 0.36 | 0.91 | 0.78 | 0.90 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 18.18 | 0.00 | 2.023 | 10.79 | 2.31 | 5.2 | 94.7 | 0.1 | 0.79 | 0.51 | 0.94 | 0.87 | 1.08 | 28605 | 3576 | 15 | 9 | 18 | 0 | 0 | logfile |
✔ | 9CDB | 45466 | 2025-06-24 | 2024-06-24 | 3.6 | 4.64 | 3.64 | 3.7 | 0.007 | 0.75 | 0.0 | 0.04 | 18.81 | 0.01 | 1.971 | 13.17 | 0.52 | 5.6 | 94.2 | 0.2 | 0.36 | 0.91 | 0.78 | 0.90 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 18.17 | 0.00 | 2.056 | 9.51 | 2.47 | 5.2 | 94.7 | 0.1 | 0.87 | 0.48 | 0.94 | 0.87 | 1.01 | 28605 | 3576 | 15 | 9 | 18 | 0 | 0 | logfile |
✘ | 9CDC | 45467 | 2025-06-10 | 2024-06-24 | 3.08 | 3.33 | 3.12 | 3.4 | 0.102 | 1.66 | 0.0 | 0.21 | 26.76 | 0.01 | 0.000 | 21.66 | 1.95 | 5.0 | 95.0 | 0.0 | 0.78 | 0.48 | 0.62 | 2.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11410 | 1200 | 10 | 0 | 40 | 100 | 0 | logfile |
✔ | 9FT7 | 50741 | 2025-06-04 | 2024-06-24 | 3.16 | 3.67 | 3.16 | 3.5 | 0.006 | 0.67 | 0.0 | 0.04 | 11.56 | 0.01 | 2.317 | 1.26 | 0.00 | 1.2 | 98.8 | 0.0 | 1.52 | 0.61 | 0.86 | 5.08 | 3.5 | 0.003 | 0.45 | 0.0 | 0.03 | 13.12 | 0.00 | 2.650 | 1.89 | 2.02 | 1.6 | 98.4 | 0.0 | 5.00 | 0.28 | 0.52 | 0.81 | 3.73 | 4016 | 516 | 4 | 0 | 4 | 0 | 0 | logfile |
✘ | 9FTi | 50746 | 2024-11-19 | 2024-06-24 | 3.5 | 3.01 | 3.49 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 2.028 | 5.56 | 0.27 | 5.7 | 94.3 | 0.0 | -1.77 | 0.70 | 0.80 | 2.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19935 | 2780 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FTi | 50746 | 2024-09-28 | 2024-06-24 | 3.5 | 3.01 | 3.49 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 2.028 | 5.56 | 0.27 | 5.7 | 94.3 | 0.0 | -1.77 | 0.70 | 0.80 | 2.93 | 3.0 | 0.005 | 0.81 | 1.0 | 0.05 | 17.38 | 0.00 | 2.388 | 4.88 | 4.72 | 3.5 | 96.5 | 0.0 | -0.66 | 0.93 | 0.68 | 0.77 | 2.11 | 19935 | 2780 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FTi | 50746 | 2025-05-20 | 2024-06-24 | 3.5 | 3.01 | 3.49 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 2.028 | 5.56 | 0.27 | 5.7 | 94.3 | 0.0 | -1.77 | 0.70 | 0.80 | 2.93 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 17.42 | 0.00 | 2.367 | 4.30 | 4.50 | 3.1 | 96.9 | 0.0 | -0.78 | 0.93 | 0.69 | 0.78 | 2.40 | 19935 | 2780 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 9FTi | 50746 | 2024-10-15 | 2024-06-24 | 3.5 | 3.01 | 3.49 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 2.028 | 5.56 | 0.27 | 5.7 | 94.3 | 0.0 | -1.77 | 0.70 | 0.80 | 2.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19935 | 2780 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FTi | 50746 | 2025-06-17 | 2024-06-24 | 3.5 | 3.01 | 3.49 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 2.028 | 5.56 | 0.27 | 5.7 | 94.3 | 0.0 | -1.77 | 0.70 | 0.80 | 2.93 | 3.0 | 0.004 | 0.68 | 0.0 | 0.04 | 17.52 | 0.00 | 2.382 | 4.41 | 6.67 | 4.8 | 95.2 | 0.0 | -0.95 | 0.92 | 0.68 | 0.79 | 2.36 | 19935 | 2780 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FTi | 50746 | 2025-01-23 | 2024-06-24 | 3.5 | 3.01 | 3.49 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 2.028 | 5.56 | 0.27 | 5.7 | 94.3 | 0.0 | -1.77 | 0.70 | 0.80 | 2.93 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 17.42 | 0.00 | 2.367 | 4.30 | 4.50 | 3.1 | 96.9 | 0.0 | -0.78 | 0.93 | 0.69 | 0.78 | 2.40 | 19935 | 2780 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CDA | 45465 | 2025-03-14 | 2024-06-24 | 3.3 | 3.08 | 3.29 | 3.3 | 0.006 | 0.59 | 0.0 | 0.05 | 18.16 | 0.00 | 1.993 | 7.61 | 1.85 | 5.1 | 94.9 | 0.0 | -2.65 | 0.60 | 0.87 | 4.03 | 3.3 | 0.008 | 0.72 | 0.0 | 0.05 | 18.56 | 0.00 | 2.524 | 5.54 | 2.88 | 8.2 | 91.8 | 0.0 | -2.76 | 0.51 | 0.61 | 0.90 | 4.30 | 9855 | 1440 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CDA | 45465 | 2025-02-14 | 2024-06-24 | 3.3 | 3.08 | 3.30 | 3.3 | 0.006 | 0.59 | 0.0 | 0.05 | 18.16 | 0.00 | 1.993 | 7.61 | 1.85 | 5.1 | 94.9 | 0.0 | -2.65 | 0.60 | 0.87 | 4.03 | 3.3 | 0.004 | 0.60 | 0.0 | 0.05 | 18.58 | 0.00 | 2.546 | 4.79 | 3.09 | 6.4 | 93.6 | 0.0 | -2.58 | 0.51 | 0.61 | 0.90 | 4.20 | 9855 | 1440 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CDD | 45468 | 2025-04-28 | 2024-06-24 | 3.05 | 3.24 | 3.04 | 3.4 | 0.014 | 1.21 | 0.0 | 0.08 | 25.46 | 0.01 | 0.629 | 22.39 | 1.95 | 3.4 | 96.6 | 0.0 | -1.04 | 0.50 | 0.64 | 2.41 | 3.3 | 0.004 | 0.68 | 0.0 | 0.04 | 17.81 | 0.00 | 2.248 | 17.96 | 2.28 | 3.1 | 96.9 | 0.0 | 0.88 | 0.89 | 0.55 | 0.71 | 2.00 | 6867 | 720 | 6 | 0 | 24 | 81 | 0 | logfile |
✔ | 9CDD | 45468 | 2025-06-05 | 2024-06-24 | 3.05 | 3.24 | 3.04 | 3.4 | 0.014 | 1.21 | 0.0 | 0.08 | 25.46 | 0.01 | 0.629 | 22.39 | 1.95 | 3.4 | 96.6 | 0.0 | -1.04 | 0.50 | 0.64 | 2.41 | 3.3 | 0.004 | 0.68 | 0.0 | 0.04 | 17.81 | 0.00 | 2.248 | 17.96 | 2.28 | 3.1 | 96.9 | 0.0 | 0.88 | 0.89 | 0.55 | 0.71 | 2.00 | 6867 | 720 | 6 | 0 | 24 | 81 | 0 | logfile |
✔ | 9CDD | 45468 | 2025-03-11 | 2024-06-24 | 3.05 | 3.24 | 3.04 | 3.4 | 0.009 | 1.21 | 0.0 | 0.08 | 25.46 | 0.01 | 0.629 | 22.39 | 1.95 | 3.4 | 96.6 | 0.0 | -1.04 | 0.50 | 0.64 | 2.41 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 17.66 | 0.00 | 2.299 | 16.96 | 1.30 | 2.7 | 97.3 | 0.0 | 0.97 | 0.89 | 0.55 | 0.70 | 1.98 | 6867 | 720 | 6 | 0 | 24 | 81 | 0 | logfile |
✔ | 9CDD | 45468 | 2025-05-10 | 2024-06-24 | 3.05 | 3.24 | 3.04 | 3.4 | 0.014 | 1.21 | 0.0 | 0.08 | 25.46 | 0.01 | 0.629 | 22.39 | 1.95 | 3.4 | 96.6 | 0.0 | -1.04 | 0.50 | 0.64 | 2.41 | 3.3 | 0.004 | 0.69 | 0.0 | 0.04 | 17.77 | 0.00 | 2.135 | 18.25 | 2.44 | 2.8 | 97.2 | 0.0 | 1.06 | 0.89 | 0.56 | 0.72 | 2.03 | 6867 | 720 | 6 | 0 | 24 | 81 | 0 | logfile |
✔ | 9CDA | 45465 | 2025-01-16 | 2024-06-24 | 3.3 | 3.08 | 3.30 | 3.3 | 0.006 | 0.59 | 0.0 | 0.05 | 18.16 | 0.00 | 1.993 | 7.61 | 1.85 | 5.1 | 94.9 | 0.0 | -2.65 | 0.60 | 0.87 | 4.03 | 3.3 | 0.004 | 0.60 | 0.0 | 0.05 | 18.58 | 0.00 | 2.546 | 4.79 | 3.09 | 6.4 | 93.6 | 0.0 | -2.58 | 0.51 | 0.61 | 0.90 | 4.20 | 9855 | 1440 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FTG | 50744 | 2025-05-21 | 2024-06-24 | 3.1 | 3.38 | 3.05 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 15.40 | 0.00 | 2.278 | 4.17 | 0.00 | 6.2 | 93.8 | 0.0 | -0.54 | 0.71 | 0.90 | 3.62 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 15.72 | 0.00 | 2.337 | 3.63 | 3.29 | 5.7 | 94.3 | 0.0 | 0.18 | 0.32 | 0.67 | 0.89 | 3.26 | 21205 | 2795 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 9FTG | 50744 | 2025-06-18 | 2024-06-24 | 3.1 | 3.38 | 3.05 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 15.40 | 0.00 | 2.278 | 4.17 | 0.00 | 6.2 | 93.8 | 0.0 | -0.54 | 0.71 | 0.90 | 3.62 | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 15.75 | 0.00 | 2.356 | 3.78 | 2.78 | 5.6 | 94.4 | 0.0 | 0.25 | 0.31 | 0.67 | 0.89 | 3.26 | 21205 | 2795 | 10 | 0 | 5 | 0 | 0 | logfile |