Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9CBU	42499	2025-06-10	2024-06-20	2.2	2.61	2.34	2.6	0.014	1.85	0.0	0.09	23.00	0.05	1.831	0.24	0.00	0.0	0.0	0.0	—	0.58	0.72	—	2.6	0.005	0.65	0.0	0.04	24.05	0.01	1.764	5.86	0.00	0.0	0.0	0.0	—	1.25	0.65	0.80	—	12600	0	2	387	22	134	4161	logfile
✔	9CBU	42499	2025-01-18	2024-06-20	2.2	2.61	2.34	2.6	0.014	1.85	0.0	0.09	23.00	0.05	1.831	0.24	0.00	0.0	0.0	0.0	—	0.58	0.72	—	2.6	0.005	0.65	0.0	0.04	24.05	0.01	1.764	5.62	0.00	0.0	0.0	0.0	—	1.25	0.65	0.80	—	12600	0	2	387	22	134	4161	logfile
✔	9CC1	45431	2025-05-23	2024-06-20	2.92	3.26	2.88	3.2	0.003	0.65	1.0	0.04	12.73	0.00	2.013	5.36	0.08	1.4	98.5	0.0	0.65	0.80	0.84	3.20	3.1	0.005	0.69	0.0	0.04	15.60	0.00	1.903	5.71	1.51	2.0	98.0	0.0	0.76	0.50	0.81	0.88	2.91	24523	3123	13	0	24	0	0	logfile
✔	9CC1	45431	2025-06-21	2024-06-20	2.92	3.26	2.88	3.2	0.003	0.65	1.0	0.04	12.73	0.00	2.013	5.36	0.08	1.4	98.5	0.0	0.65	0.80	0.84	3.20	3.2	0.004	0.79	2.0	0.04	15.57	0.00	1.992	5.91	1.47	1.7	98.3	0.0	1.16	0.50	0.81	0.87	2.70	24523	3123	13	0	24	0	0	logfile
✘	9CC3	45433	2025-05-25	2024-06-20	3.23	3.69	3.26	3.5	0.002	0.55	0.0	0.04	12.88	0.00	2.068	4.56	0.00	1.4	98.6	0.0	1.22	0.79	0.83	2.26	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25779	3323	11	0	38	0	0	logfile
✔	9CC3	45433	2025-06-22	2024-06-20	3.23	3.69	3.26	3.5	0.002	0.55	0.0	0.04	12.88	0.00	2.068	4.56	0.00	1.4	98.6	0.0	1.22	0.79	0.83	2.26	3.5	0.004	0.60	0.0	0.04	14.56	0.00	1.911	4.85	1.44	2.1	97.9	0.0	1.22	1.87	0.79	0.85	2.18	25779	3323	11	0	38	0	0	logfile
✔	9FS5	50723	2025-01-21	2024-06-20	2.66	3.55	2.70	3.5	0.004	0.50	0.0	0.04	15.59	0.00	2.222	6.29	3.60	4.5	95.5	0.0	0.97	0.61	0.63	0.52	3.3	0.004	0.58	0.0	0.04	16.71	0.00	2.477	7.38	3.49	3.0	97.0	0.0	1.06	1.08	0.70	0.87	3.49	16770	2250	10	0	0	0	0	logfile
✔	9FS5	50723	2025-05-18	2024-06-20	2.66	3.55	2.70	3.5	0.004	0.50	0.0	0.04	15.59	0.00	2.222	6.29	3.60	4.5	95.5	0.0	0.97	0.61	0.63	0.52	3.3	0.004	0.58	0.0	0.04	16.71	0.00	2.477	7.38	3.49	3.0	97.0	0.0	1.06	1.08	0.70	0.87	3.49	16770	2250	10	0	0	0	0	logfile
✔	9FS5	50723	2025-06-15	2024-06-20	2.66	3.55	2.70	3.5	0.004	0.50	0.0	0.04	15.59	0.00	2.222	6.29	3.60	4.5	95.5	0.0	0.97	0.61	0.63	0.52	3.3	0.004	0.58	0.0	0.04	16.67	0.00	2.440	7.23	3.37	3.1	96.9	0.0	1.07	1.08	0.70	0.87	3.48	16770	2250	10	0	0	0	0	logfile
✔	9ii3	60589	2025-05-18	2024-06-19	3.9	3.97	—	3.9	0.004	0.62	0.0	0.04	12.82	0.00	2.110	13.02	0.00	6.4	93.6	0.0	-0.92	0.80	0.72	1.33	3.8	0.003	0.73	0.0	0.04	15.42	0.00	2.340	13.11	2.20	6.7	93.3	0.0	-1.30	1.23	0.81	0.74	0.94	16488	2156	10	0	6	0	0	logfile
✔	9ii3	60589	2025-06-14	2024-06-19	3.9	3.97	—	3.9	0.004	0.62	0.0	0.04	12.82	0.00	2.110	13.02	0.00	6.4	93.6	0.0	-0.92	0.80	0.72	1.33	3.8	0.003	0.69	0.0	0.04	15.43	0.00	2.336	11.35	1.90	6.6	93.4	0.0	-1.16	1.23	0.81	0.73	0.88	16488	2156	10	0	6	0	0	logfile
✔	9CBB	45421	2025-05-11	2024-06-18	4.15	4.29	4.00	4.2	0.007	0.92	0.0	0.04	14.26	0.01	2.221	3.12	0.00	6.2	93.8	0.0	-2.08	0.49	0.73	—	4.2	0.003	0.62	0.0	0.04	13.97	0.00	2.373	8.42	0.00	7.1	92.9	0.0	-0.04	0.96	0.50	0.74	—	7356	470	2	0	1	0	3733	logfile
✔	9CBB	45421	2025-02-12	2024-06-18	4.15	4.29	4.01	4.2	0.007	0.92	0.0	0.04	14.26	0.01	2.221	3.12	0.00	6.2	93.8	0.0	-2.08	0.49	0.73	—	4.2	0.003	0.62	0.0	0.04	13.97	0.00	2.373	8.42	0.00	7.1	92.9	0.0	-0.04	0.96	0.50	0.74	—	7356	470	2	0	1	0	3733	logfile
✔	9CBB	45421	2025-03-12	2024-06-18	4.15	4.29	4.00	4.2	0.007	0.92	0.0	0.04	14.26	0.01	2.221	3.12	0.00	6.2	93.8	0.0	-2.08	0.49	0.73	—	4.2	0.003	0.63	0.0	0.04	14.04	0.00	2.379	7.88	0.00	7.3	92.7	0.0	-0.08	0.96	0.49	0.74	—	7356	470	2	0	1	0	3733	logfile
✔	9CBB	45421	2025-06-06	2024-06-18	4.15	4.29	4.00	4.2	0.007	0.92	0.0	0.04	14.26	0.01	2.221	3.12	0.00	6.2	93.8	0.0	-2.08	0.49	0.73	—	4.2	0.003	0.63	0.0	0.04	14.04	0.00	2.379	7.88	0.00	7.3	92.7	0.0	-0.08	0.96	0.49	0.74	—	7356	470	2	0	1	0	3733	logfile
✔	9FR4	50708	2025-05-10	2024-06-18	3.1	3.44	3.07	3.5	0.004	0.68	0.0	0.04	13.90	0.00	2.125	5.93	0.00	5.9	94.1	0.0	-3.57	0.60	0.80	2.99	3.5	0.003	0.53	0.0	0.04	16.25	0.00	2.472	3.39	2.51	4.8	95.2	0.0	-1.45	0.39	0.56	0.79	2.45	4874	614	4	0	0	0	0	logfile
✔	9FR4	50708	2025-04-27	2024-06-18	3.1	3.44	3.07	3.5	0.004	0.68	0.0	0.04	13.90	0.00	2.125	5.93	0.00	5.9	94.1	0.0	-3.57	0.60	0.80	2.99	3.5	0.003	0.54	0.0	0.04	16.24	0.00	2.430	3.71	3.67	5.4	94.6	0.0	-1.62	0.38	0.56	0.79	2.83	4874	614	4	0	0	0	0	logfile
✔	9FR4	50708	2025-06-05	2024-06-18	3.1	3.44	3.07	3.5	0.004	0.68	0.0	0.04	13.90	0.00	2.125	5.93	0.00	5.9	94.1	0.0	-3.57	0.60	0.80	2.99	3.5	0.003	0.54	0.0	0.04	16.24	0.00	2.430	3.71	3.67	5.4	94.6	0.0	-1.62	0.38	0.56	0.79	2.83	4874	614	4	0	0	0	0	logfile
✔	8ZYW	60581	2025-01-15	2024-06-18	3.43	3.41	3.36	3.6	0.003	0.55	0.0	0.04	17.93	0.00	2.109	8.67	0.32	1.7	98.3	0.0	3.05	0.60	0.78	0.40	3.6	0.003	0.48	0.0	0.04	18.39	0.00	2.493	6.24	3.09	1.7	98.3	0.0	3.86	0.27	0.55	0.78	0.36	8910	1174	10	0	0	4	0	logfile
✔	8ZYW	60581	2025-02-13	2024-06-18	3.43	3.41	3.36	3.6	0.003	0.55	0.0	0.04	17.93	0.00	2.109	8.67	0.32	1.7	98.3	0.0	3.05	0.60	0.78	0.40	3.6	0.003	0.48	0.0	0.04	18.39	0.00	2.493	6.24	3.09	1.7	98.3	0.0	3.86	0.27	0.55	0.78	0.36	8910	1174	10	0	0	4	0	logfile

• ← previous
• Page 152 of 5208
• next →