Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9BBM	44422	2024-08-03	2024-04-06	3.2	3.01	3.08	3.2	0.012	2.05	4.0	0.11	13.73	0.01	2.513	0.00	0.51	12.7	82.4	4.9	-3.91	0.33	0.62	3.86	3.2	0.003	0.67	0.0	0.05	16.37	0.00	2.383	6.18	1.28	10.4	88.7	0.9	-3.22	1.30	0.35	0.73	4.15	6966	444	6	0	0	0	3558	logfile
✔	9BBM	44422	2024-07-19	2024-04-06	3.2	3.01	3.08	3.2	0.012	2.05	4.0	0.11	13.73	0.01	2.513	0.00	0.51	12.7	82.4	4.9	-3.91	0.33	0.62	3.86	3.2	0.003	0.66	0.0	0.05	16.39	0.00	2.149	7.90	1.79	8.3	90.7	0.9	-3.08	1.33	0.34	0.73	3.97	6966	444	6	0	0	0	3558	logfile
✔	8YZ5	39685	2024-07-25	2024-04-06	3.93	3.86	3.78	3.8	0.003	0.66	0.0	0.05	12.98	0.01	1.479	16.77	0.07	5.9	94.0	0.1	-1.75	0.44	0.50	0.29	3.8	0.003	0.69	0.0	0.05	15.39	0.00	2.074	18.46	2.54	6.7	93.3	0.0	-1.89	1.00	0.45	0.53	0.26	27677	3556	7	0	0	0	0	logfile
✘	8YZ5	39685	2024-08-09	2024-04-06	3.93	3.86	3.78	3.8	0.003	0.66	0.0	0.05	12.98	0.01	1.479	16.77	0.07	5.9	94.0	0.1	-1.75	0.44	0.50	0.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	27677	3556	7	0	0	0	0	logfile
✔	8YZ6	39686	2024-07-24	2024-04-06	4.55	4.63	4.46	4.6	0.004	0.67	0.0	0.05	13.46	0.01	1.194	18.91	0.36	3.8	96.0	0.2	-0.97	0.50	0.60	—	4.5	0.003	0.67	0.0	0.05	13.49	0.00	2.086	16.48	0.04	5.8	94.1	0.1	-1.26	1.03	0.50	0.62	—	24972	3161	13	0	18	0	0	logfile
✔	8YZ6	39686	2024-08-09	2024-04-06	4.55	4.63	4.46	4.6	0.004	0.67	0.0	0.05	13.46	0.01	1.194	18.91	0.36	3.8	96.0	0.2	-0.97	0.50	0.60	—	4.5	0.003	0.64	0.0	0.04	13.37	0.00	2.368	11.55	0.00	4.5	95.5	0.1	-1.05	1.00	0.50	0.61	—	24972	3161	13	0	18	0	0	logfile
✔	9BBL	44421	2025-01-17	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.005	0.70	0.0	0.05	16.94	0.00	2.430	3.27	0.85	8.8	91.2	0.0	-3.01	2.35	0.39	0.83	5.45	10395	666	9	0	0	0	5301	logfile
✔	8YZ6	39686	2024-09-30	2024-04-06	4.55	4.63	4.46	4.6	0.004	0.67	0.0	0.05	13.46	0.01	1.194	18.91	0.36	3.8	96.0	0.2	-0.97	0.50	0.60	—	4.5	0.003	0.64	0.0	0.04	13.37	0.00	2.368	11.55	0.00	4.5	95.5	0.1	-1.05	1.00	0.50	0.61	—	24972	3161	13	0	18	0	0	logfile
✘	8YZD	39690	2025-02-11	2024-04-06	3.07	2.88	3.09	1.9	0.002	0.42	0.0	0.04	7.78	0.00	2.299	1.99	1.29	2.2	97.8	0.0	-1.69	0.87	0.87	2.54	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6436	792	2	0	0	0	0	logfile
✔	8YZD	39690	2025-03-11	2024-04-06	3.07	2.88	3.09	1.9	0.002	0.42	0.0	0.04	7.78	0.00	2.299	1.99	1.29	2.2	97.8	0.0	-1.69	0.87	0.87	2.54	1.5	0.004	0.62	0.0	0.04	14.18	0.00	2.047	2.39	2.01	3.4	96.6	0.0	0.53	0.65	0.90	0.92	2.38	6436	792	2	0	0	0	0	logfile
✔	8YZB	39688	2025-04-27	2024-04-06	3.29	3.29	3.39	1.8	0.003	0.54	1.0	0.04	7.28	0.00	2.242	2.62	1.43	2.2	97.8	0.0	-0.85	0.86	0.81	2.16	1.4	0.003	0.77	0.0	0.05	13.60	0.00	2.295	4.29	1.43	3.8	96.2	0.0	0.60	1.59	0.90	0.90	2.79	6448	792	2	0	0	0	0	logfile
✔	8YZB	39688	2025-03-11	2024-04-06	3.29	3.29	3.39	1.8	0.003	0.54	1.0	0.04	7.28	0.00	2.242	2.62	1.43	2.2	97.8	0.0	-0.85	0.86	0.81	2.16	1.4	0.003	0.74	0.0	0.04	13.57	0.00	2.294	4.05	1.15	3.3	96.7	0.0	0.72	1.75	0.90	0.89	2.67	6448	792	2	0	0	0	0	logfile
✔	8YZB	39688	2025-02-11	2024-04-06	3.29	3.29	3.38	1.8	0.003	0.54	1.0	0.04	7.28	0.00	2.242	2.62	1.43	2.2	97.8	0.0	-0.85	0.86	0.81	2.16	1.4	0.003	0.75	0.0	0.05	13.64	0.00	2.265	3.65	1.72	3.4	96.6	0.0	0.49	1.59	0.90	0.90	2.64	6448	792	2	0	0	0	0	logfile
✔	8YZD	39690	2025-04-27	2024-04-06	3.07	2.88	3.09	1.9	0.002	0.42	0.0	0.04	7.78	0.00	2.299	1.99	1.29	2.2	97.8	0.0	-1.69	0.87	0.87	2.54	1.5	0.003	0.61	0.0	0.04	14.07	0.00	2.302	2.31	1.72	3.3	96.7	0.0	0.53	0.65	0.90	0.91	2.37	6436	792	2	0	0	0	0	logfile
✔	9BBL	44421	2024-09-25	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.002	0.60	0.0	0.05	15.78	0.00	2.573	2.31	0.17	6.8	93.2	0.0	-2.88	0.80	0.39	0.82	5.22	10395	666	9	0	0	0	5301	logfile
✔	9BBL	44421	2024-11-16	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.002	0.60	0.0	0.05	15.78	0.00	2.573	2.31	0.17	6.8	93.2	0.0	-2.88	0.80	0.39	0.82	5.22	10395	666	9	0	0	0	5301	logfile
✔	9BBL	44421	2024-07-20	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.004	0.65	0.0	0.05	15.78	0.00	2.215	2.79	0.85	7.9	92.1	0.0	-2.87	0.82	0.39	0.83	5.64	10395	666	9	0	0	0	5301	logfile
✔	9BBL	44421	2025-02-14	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.005	0.70	0.0	0.05	16.94	0.00	2.430	3.27	0.85	8.8	91.2	0.0	-3.01	2.35	0.39	0.83	5.45	10395	666	9	0	0	0	5301	logfile
✔	9BBL	44421	2024-12-29	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.002	0.60	0.0	0.05	15.78	0.00	2.573	2.31	0.17	6.8	93.2	0.0	-2.88	0.80	0.39	0.82	5.22	10395	666	9	0	0	0	5301	logfile
✔	9BBL	44421	2024-10-11	2024-04-06	2.5	2.33	2.51	2.6	0.011	2.11	2.0	0.10	10.02	0.01	2.489	0.19	0.00	9.7	88.9	1.4	-2.48	0.27	0.65	5.75	2.6	0.002	0.60	0.0	0.05	15.78	0.00	2.573	2.31	0.17	6.8	93.2	0.0	-2.88	0.80	0.39	0.82	5.22	10395	666	9	0	0	0	5301	logfile

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