Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9AYW	44000	2024-07-24	2024-03-08	3.0	3.21	3.04	3.2	0.005	0.78	0.0	0.06	14.17	0.01	2.290	2.83	0.00	4.0	96.0	0.0	-0.76	0.68	0.81	3.01	3.2	0.002	0.51	0.0	0.04	15.64	0.00	2.187	5.38	1.80	2.9	97.1	0.0	0.62	1.13	0.69	0.83	2.88	24813	3123	6	0	30	0	0	logfile
✔	9AYX	44001	2024-07-24	2024-03-08	3.0	3.22	3.09	3.3	0.004	0.71	0.0	0.05	13.83	0.01	2.313	3.10	0.00	4.0	96.0	0.0	-1.09	0.66	0.79	2.73	3.2	0.003	0.55	0.0	0.04	15.54	0.00	2.187	5.28	2.50	3.6	96.4	0.0	0.24	0.43	0.68	0.83	2.84	24813	3123	6	0	30	0	0	logfile
✘	9AYX	44001	2025-01-26	2024-03-08	3.0	3.22	3.09	3.3	0.004	0.71	0.0	0.05	13.83	0.01	2.313	3.10	0.00	4.0	96.0	0.0	-1.09	0.66	0.79	2.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24813	3123	6	0	30	0	0	logfile
✘	9AYX	44001	2024-09-30	2024-03-08	3.0	3.22	3.09	3.3	0.004	0.71	0.0	0.05	13.83	0.01	2.313	3.10	0.00	4.0	96.0	0.0	-1.09	0.66	0.79	2.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24813	3123	6	0	30	0	0	logfile
✘	9AYX	44001	2024-08-09	2024-03-08	3.0	3.22	3.09	3.3	0.004	0.71	0.0	0.05	13.83	0.01	2.313	3.10	0.00	4.0	96.0	0.0	-1.09	0.66	0.79	2.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24813	3123	6	0	30	0	0	logfile
✔	9EMN	19821	2024-12-31	2024-03-08	3.3	3.55	3.25	3.5	0.003	0.59	0.0	0.04	17.62	0.01	2.236	5.30	0.38	6.0	94.0	0.0	-2.43	0.76	0.84	2.72	3.5	0.003	0.59	0.0	0.04	17.91	0.00	2.489	3.93	2.54	6.4	93.6	0.0	-1.63	0.96	0.75	0.82	2.70	14680	1829	4	0	0	0	0	logfile
✔	9EMN	19821	2025-01-20	2024-03-08	3.3	3.55	3.25	3.5	0.003	0.59	0.0	0.04	17.62	0.01	2.236	5.30	0.38	6.0	94.0	0.0	-2.43	0.76	0.84	2.72	3.5	0.005	0.70	0.0	0.05	17.99	0.01	2.461	4.41	3.30	7.3	92.7	0.0	-2.07	0.96	0.75	0.83	2.87	14680	1829	4	0	0	0	0	logfile
✔	9EME	19818	2024-09-23	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.019	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.90	0.00	2.560	3.61	1.35	6.2	93.8	0.0	-3.04	1.18	0.49	0.82	5.35	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2025-02-11	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.019	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.93	0.00	2.500	3.86	1.13	5.5	94.5	0.0	-3.06	1.19	0.49	0.82	4.97	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2024-10-09	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.019	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.90	0.00	2.560	3.61	1.35	6.2	93.8	0.0	-3.04	1.18	0.49	0.82	5.35	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2024-11-14	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.019	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.90	0.00	2.560	3.61	1.35	6.2	93.8	0.0	-3.04	1.18	0.49	0.82	5.35	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2025-01-13	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.019	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.93	0.00	2.500	3.86	1.13	5.5	94.5	0.0	-3.06	1.19	0.49	0.82	4.97	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2024-12-27	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.019	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.90	0.00	2.560	3.61	1.35	6.2	93.8	0.0	-3.04	1.18	0.49	0.82	5.35	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2024-08-02	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.562	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.61	0.0	0.04	15.79	0.00	2.537	3.12	1.80	3.6	96.4	0.0	-2.99	1.18	0.49	0.83	5.38	4140	552	6	0	0	0	0	logfile
✔	9EME	19818	2025-03-06	2024-03-08	2.92	3.09	2.69	3.1	0.015	2.12	0.0	0.12	14.21	0.01	2.562	0.00	0.00	0.0	100.0	0.0	-4.40	0.34	0.61	5.02	3.1	0.003	0.62	0.0	0.04	15.84	0.00	2.547	3.37	0.90	3.4	96.6	0.0	-2.95	1.18	0.49	0.83	5.35	4140	552	6	0	0	0	0	logfile
✔	9AYC	43985	2025-01-26	2024-03-07	3.23	3.84	3.34	3.7	0.004	0.61	0.0	0.04	11.28	0.00	2.353	0.34	0.00	1.3	98.7	0.0	1.11	0.65	0.84	2.92	3.7	0.003	0.50	0.0	0.04	13.87	0.00	2.437	3.79	1.01	2.1	97.9	0.0	2.96	0.82	0.66	0.85	2.21	23723	1481	1	0	0	0	11947	logfile
✔	9EM8	19813	2024-10-11	2024-03-07	4.1	4.53	4.13	4.3	0.002	0.38	0.0	0.03	9.41	0.00	1.973	6.95	0.44	1.8	98.2	0.0	1.61	0.80	0.62	—	4.3	0.002	0.48	0.0	0.03	12.30	0.00	2.167	43.70	0.00	3.2	96.8	0.0	1.97	3.34	0.86	0.76	—	57040	6336	8	0	0	0	6168	logfile
✔	9EM8	19813	2024-12-29	2024-03-07	4.1	4.53	4.13	4.3	0.002	0.38	0.0	0.03	9.41	0.00	1.973	6.95	0.44	1.8	98.2	0.0	1.61	0.80	0.62	—	4.3	0.002	0.48	0.0	0.03	12.30	0.00	2.167	43.70	0.00	3.2	96.8	0.0	1.97	3.34	0.86	0.76	—	57040	6336	8	0	0	0	6168	logfile
✔	9AYC	43985	2024-09-30	2024-03-07	3.23	3.84	3.34	3.7	0.004	0.61	0.0	0.04	11.28	0.00	2.353	0.34	0.00	1.3	98.7	0.0	1.11	0.65	0.84	2.92	3.7	0.003	0.50	0.0	0.04	13.90	0.00	2.430	3.54	0.93	1.8	98.2	0.0	2.82	0.82	0.66	0.85	2.28	23723	1481	1	0	0	0	11947	logfile
✔	9AYB	43984	2025-01-13	2024-03-07	3.19	3.65	3.20	3.6	0.003	0.52	0.0	0.04	12.73	0.00	2.313	2.08	0.57	0.9	99.1	0.0	1.23	0.44	0.79	2.78	3.6	0.002	0.51	0.0	0.04	14.11	0.00	2.617	3.42	1.70	1.4	98.6	0.0	1.88	0.32	0.43	0.78	2.01	3347	428	1	0	0	0	0	logfile

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