Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8ZFD	60057	2025-05-09	2024-05-07	2.56	2.01	2.33	2.6	0.007	0.99	2.0	0.06	13.01	0.01	2.217	9.64	0.46	9.9	90.1	0.0	-1.61	0.77	0.76	3.98	2.6	0.006	0.76	0.0	0.05	15.98	0.01	2.586	6.42	3.23	6.2	93.8	0.0	-0.02	0.43	0.75	0.78	3.51	2231	294	1	0	0	0	0	logfile
✘	8ZFE	60058	2025-04-26	2024-05-07	2.56	2.41	2.34	2.2	0.008	0.76	1.0	0.06	12.27	0.01	2.278	10.52	0.48	8.2	91.8	0.0	-2.16	0.80	0.80	3.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2198	293	1	0	0	0	0	logfile
✔	8ZFB	60055	2025-04-26	2024-05-07	3.78	2.07	2.33	1.8	0.005	0.98	2.0	0.07	13.25	0.01	1.786	10.45	0.52	8.2	91.8	0.0	0.06	0.57	0.55	3.32	1.4	0.003	0.69	0.0	0.04	14.82	0.01	2.583	3.65	2.59	4.3	95.7	0.0	2.28	0.41	0.62	0.60	2.71	2088	286	1	0	0	0	0	logfile
✔	8ZFB	60055	2025-05-09	2024-05-07	3.78	2.07	2.33	1.8	0.005	0.98	2.0	0.07	13.25	0.01	1.786	10.45	0.52	8.2	91.8	0.0	0.06	0.57	0.55	3.32	1.4	0.003	0.65	0.0	0.04	14.74	0.01	2.626	3.40	3.11	3.2	96.8	0.0	2.37	0.39	0.62	0.60	2.45	2088	286	1	0	0	0	0	logfile
✔	8ZFA	60054	2025-05-11	2024-05-07	2.96	2.20	2.83	2.0	0.004	0.74	3.0	0.06	12.50	0.01	1.845	10.39	0.50	4.8	95.2	0.0	0.22	0.75	0.72	3.82	1.9	0.005	0.70	0.0	0.04	15.63	0.01	2.530	8.28	3.11	4.4	95.6	0.0	0.33	1.19	0.79	0.78	3.08	8313	1134	5	0	0	0	0	logfile
✔	9BPD	44772	2025-05-11	2024-05-07	3.63	4.09	3.84	4.1	0.003	0.68	0.0	0.05	17.66	0.00	2.046	13.38	0.38	12.0	87.7	0.3	-2.62	0.61	0.71	2.29	4.1	0.004	0.71	0.0	0.05	17.33	0.00	1.916	9.30	3.14	12.2	87.6	0.2	-2.29	0.37	0.67	0.77	2.26	7551	918	12	0	21	0	0	logfile
✔	9BPD	44772	2025-04-28	2024-05-07	3.63	4.09	3.84	4.1	0.003	0.68	0.0	0.05	17.66	0.00	2.046	13.38	0.38	12.0	87.7	0.3	-2.62	0.61	0.71	2.29	4.1	0.004	0.72	0.0	0.05	17.27	0.00	1.946	9.83	2.89	11.6	88.4	0.0	-2.33	0.39	0.67	0.77	2.17	7551	918	12	0	21	0	0	logfile
✔	8ZFA	60054	2025-04-29	2024-05-07	2.96	2.20	2.83	2.0	0.004	0.74	3.0	0.06	12.50	0.01	1.845	10.39	0.50	4.8	95.2	0.0	0.22	0.75	0.72	3.82	1.9	0.003	0.69	0.0	0.04	15.66	0.01	2.547	8.28	2.86	4.1	95.9	0.0	0.57	1.18	0.78	0.78	3.15	8313	1134	5	0	0	0	0	logfile
✔	8ZFA	60054	2025-03-12	2024-05-07	2.96	2.20	2.83	2.0	0.004	0.73	3.0	0.06	12.50	0.01	1.845	10.39	0.50	4.8	95.2	0.0	0.22	0.75	0.72	3.82	1.9	0.003	0.69	0.0	0.04	15.66	0.01	2.547	8.28	2.86	4.1	95.9	0.0	0.57	1.18	0.78	0.78	3.15	8313	1134	5	0	0	0	0	logfile
✔	8ZFD	60057	2025-03-05	2024-05-07	2.56	2.01	2.33	2.6	0.007	0.98	2.0	0.06	13.01	0.01	2.217	9.64	0.46	9.9	90.1	0.0	-1.61	0.77	0.76	3.98	2.6	0.004	0.68	0.0	0.04	15.71	0.00	2.600	6.88	4.15	5.8	94.2	0.0	0.48	0.43	0.75	0.78	3.64	2231	294	1	0	0	0	0	logfile
✔	8ZFD	60057	2025-04-26	2024-05-07	2.56	2.01	2.33	2.6	0.007	0.99	2.0	0.06	13.01	0.01	2.217	9.64	0.46	9.9	90.1	0.0	-1.61	0.77	0.76	3.98	2.6	0.004	0.68	0.0	0.04	15.71	0.00	2.600	6.88	4.15	5.8	94.2	0.0	0.48	0.43	0.75	0.78	3.64	2231	294	1	0	0	0	0	logfile
✔	8ZEE	60026	2024-09-28	2024-05-06	2.9	2.66	2.99	3.3	0.007	1.19	0.0	0.04	18.03	0.01	2.080	5.25	0.00	2.7	97.2	0.1	1.55	0.78	0.82	2.75	3.3	0.004	0.61	0.0	0.04	16.89	0.00	2.334	5.69	1.53	3.5	96.5	0.0	1.59	0.41	0.79	0.85	2.47	20218	2101	26	0	70	0	0	logfile
✔	8ZEE	60026	2024-08-07	2024-05-06	2.9	2.66	2.99	3.3	0.007	1.19	0.0	0.04	18.03	0.01	2.080	5.25	0.00	2.7	97.2	0.1	1.55	0.78	0.82	2.75	3.3	0.004	0.61	0.0	0.04	16.89	0.00	2.334	5.69	1.53	3.5	96.5	0.0	1.59	0.41	0.79	0.85	2.47	20218	2101	26	0	70	0	0	logfile
✔	8ZEE	60026	2025-05-20	2024-05-06	2.9	2.66	2.99	3.3	0.008	1.19	0.0	0.04	18.03	0.01	2.080	5.25	0.00	2.7	97.2	0.1	1.55	0.78	0.82	2.75	3.3	0.003	0.57	0.0	0.04	16.82	0.00	2.343	5.55	1.47	3.1	96.8	0.0	1.84	0.40	0.79	0.85	2.48	20218	2101	26	0	70	0	0	logfile
✔	8ZEE	60026	2025-01-23	2024-05-06	2.9	2.66	2.99	3.3	0.007	1.19	0.0	0.04	18.03	0.01	2.080	5.25	0.00	2.7	97.2	0.1	1.55	0.78	0.82	2.75	3.3	0.003	0.57	0.0	0.04	16.82	0.00	2.343	5.55	1.47	3.1	96.8	0.0	1.84	0.40	0.79	0.85	2.48	20218	2101	26	0	70	0	0	logfile
✔	8ZEE	60026	2024-10-15	2024-05-06	2.9	2.66	2.99	3.3	0.007	1.19	0.0	0.04	18.03	0.01	2.080	5.25	0.00	2.7	97.2	0.1	1.55	0.78	0.82	2.75	3.3	0.004	0.61	0.0	0.04	16.89	0.00	2.334	5.69	1.53	3.5	96.5	0.0	1.59	0.41	0.79	0.85	2.47	20218	2101	26	0	70	0	0	logfile
✔	8ZEE	60026	2024-11-19	2024-05-06	2.9	2.66	2.99	3.3	0.007	1.19	0.0	0.04	18.03	0.01	2.080	5.25	0.00	2.7	97.2	0.1	1.55	0.78	0.82	2.75	3.3	0.004	0.61	0.0	0.04	16.89	0.00	2.334	5.69	1.53	3.5	96.5	0.0	1.59	0.41	0.79	0.85	2.47	20218	2101	26	0	70	0	0	logfile
✔	8ZEK	60037	2025-05-14	2024-05-06	3.15	3.85	3.16	3.5	0.003	0.68	0.0	0.04	17.29	0.00	2.266	9.27	1.29	3.0	97.0	0.0	0.39	0.69	0.53	1.18	3.5	0.003	0.64	0.0	0.04	18.14	0.00	2.569	9.09	2.42	3.1	96.9	0.0	0.49	1.08	0.78	0.82	1.44	11560	1426	3	0	0	0	0	logfile
✔	8ZEK	60037	2024-12-29	2024-05-06	3.15	3.85	3.17	3.5	0.003	0.68	0.0	0.04	17.29	0.00	2.266	9.27	1.29	3.0	97.0	0.0	0.39	0.69	0.53	1.18	3.5	0.003	0.66	0.0	0.04	18.09	0.00	2.389	8.74	1.86	3.2	96.8	0.0	0.52	1.35	0.77	0.81	1.56	11560	1426	3	0	0	0	0	logfile
✔	8ZEK	60037	2025-01-18	2024-05-06	3.15	3.85	3.17	3.5	0.003	0.68	0.0	0.04	17.29	0.00	2.266	9.27	1.29	3.0	97.0	0.0	0.39	0.69	0.53	1.18	3.5	0.003	0.64	0.0	0.04	18.14	0.00	2.569	9.09	2.42	3.1	96.9	0.0	0.49	1.08	0.78	0.82	1.44	11560	1426	3	0	0	0	0	logfile

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