Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9F6o	50236	2025-01-14	2024-05-02	3.9	4.30	4.10	4.2	0.004	0.80	0.0	0.04	17.49	0.00	2.268	16.41	3.07	3.2	96.8	0.0	0.92	0.55	0.76	0.55	4.2	0.003	0.77	0.0	0.04	17.51	0.00	2.475	14.56	4.92	2.9	97.1	0.0	1.24	0.51	0.55	0.76	0.93	4571	591	2	0	0	0	0	logfile
✔	9F6o	50236	2025-02-11	2024-05-02	3.9	4.30	4.10	4.2	0.004	0.80	0.0	0.04	17.49	0.00	2.268	16.41	3.07	3.2	96.8	0.0	0.92	0.55	0.76	0.55	4.2	0.003	0.77	0.0	0.04	17.51	0.00	2.475	14.56	4.92	2.9	97.1	0.0	1.24	0.51	0.55	0.76	0.93	4571	591	2	0	0	0	0	logfile
✔	9F6o	50236	2025-03-06	2024-05-02	3.9	4.30	4.08	4.2	0.004	0.80	0.0	0.04	17.49	0.00	2.268	16.41	3.07	3.2	96.8	0.0	0.92	0.55	0.76	0.55	4.2	0.004	0.76	0.0	0.04	17.34	0.00	2.516	14.56	4.71	3.4	96.6	0.0	1.27	0.52	0.56	0.76	0.69	4571	591	2	0	0	0	0	logfile
✔	9F6o	50236	2024-12-27	2024-05-02	3.9	4.30	4.10	4.2	0.004	0.80	0.0	0.04	17.49	0.00	2.268	16.41	3.07	3.2	96.8	0.0	0.92	0.55	0.76	0.55	4.2	0.003	0.77	0.0	0.04	17.51	0.00	2.485	14.24	3.48	3.2	96.8	0.0	1.32	0.53	0.55	0.76	0.68	4571	591	2	0	0	0	0	logfile
✔	9F6o	50236	2025-04-27	2024-05-02	3.9	4.30	4.08	4.2	0.004	0.80	0.0	0.04	17.49	0.00	2.268	16.41	3.07	3.2	96.8	0.0	0.92	0.55	0.76	0.55	4.2	0.004	0.76	0.0	0.04	17.34	0.00	2.516	14.56	4.71	3.4	96.6	0.0	1.27	0.52	0.56	0.76	0.69	4571	591	2	0	0	0	0	logfile
✔	9F6Q	50238	2025-04-26	2024-05-02	3.9	4.14	3.83	4.2	0.004	0.83	0.0	0.04	15.98	0.01	2.219	16.19	2.62	4.1	95.9	0.0	1.22	0.54	0.71	0.79	4.2	0.004	1.01	0.0	0.05	16.75	0.01	2.556	19.73	5.51	4.5	95.5	0.0	1.03	0.70	0.53	0.72	0.79	3618	469	1	0	0	0	0	logfile
✔	9BMP	44706	2025-05-23	2024-05-02	3.5	3.96	3.76	3.9	0.003	0.68	0.0	0.04	16.62	0.00	2.108	11.23	0.39	2.8	97.1	0.0	1.15	0.77	0.81	1.05	3.9	0.003	0.62	0.0	0.04	17.15	0.00	2.453	9.28	1.81	3.0	97.0	0.1	1.77	0.46	0.76	0.81	1.12	23110	2858	2	0	4	0	0	logfile
✔	9BNP	44733	2025-05-18	2024-05-02	3.17	3.83	3.25	3.6	0.006	1.24	1.0	0.07	15.57	0.00	2.207	3.65	0.00	4.1	95.9	0.0	-0.57	0.78	0.82	2.90	3.6	0.002	0.63	0.0	0.04	13.45	0.00	2.449	3.59	1.71	2.8	97.2	0.0	0.20	0.41	0.80	0.85	2.88	16537	1920	49	0	107	0	0	logfile
✔	9BNK	44728	2025-05-18	2024-05-02	3.1	3.71	3.11	3.4	0.005	1.04	3.0	0.07	14.69	0.01	2.255	4.75	0.97	4.9	95.1	0.0	-2.04	0.84	0.87	2.41	3.4	0.003	0.63	0.0	0.04	14.51	0.00	2.452	5.84	2.29	3.3	96.7	0.0	-0.05	1.25	0.85	0.89	2.83	16747	1966	33	0	93	0	0	logfile
✔	9BNL	44729	2025-05-18	2024-05-02	3.6	4.51	3.78	4.0	0.005	0.99	1.0	0.05	13.61	0.00	2.191	4.21	0.00	5.0	95.0	0.0	-1.32	0.84	0.84	2.44	4.0	0.003	0.67	0.0	0.04	13.80	0.00	2.355	5.99	1.48	4.2	95.8	0.0	-0.30	0.94	0.85	0.86	2.40	16749	1911	54	0	120	0	0	logfile
✔	9BLR	44674	2025-01-22	2024-05-01	3.38	4.09	3.39	3.8	0.005	0.86	0.0	0.05	15.97	0.01	2.364	1.03	0.20	3.1	96.9	0.0	-1.18	0.79	0.81	3.13	3.8	0.003	0.58	0.0	0.04	13.77	0.00	2.359	3.31	0.88	2.2	97.8	0.0	0.35	0.75	0.75	0.80	2.32	18237	1148	10	0	17	0	8811	logfile
✔	9BLR	44674	2025-05-19	2024-05-01	3.38	4.09	3.39	3.8	0.005	0.89	0.0	0.05	15.97	0.01	2.364	1.03	0.20	3.1	96.9	0.0	-1.18	0.79	0.81	3.13	3.8	0.003	0.58	0.0	0.04	13.74	0.00	2.336	3.04	1.18	2.0	98.0	0.0	0.43	0.75	0.75	0.80	2.30	18237	1148	10	0	17	0	8811	logfile
✔	8ZD4	39950	2025-05-10	2024-05-01	2.9	3.05	2.87	3.0	0.006	0.94	0.0	0.05	16.49	0.01	2.208	8.16	5.51	7.8	92.0	0.1	-1.14	0.66	0.72	1.21	3.1	0.003	0.68	0.0	0.05	16.73	0.01	2.410	6.67	4.99	5.8	94.1	0.1	-0.89	0.35	0.66	0.73	1.18	6795	850	4	0	0	0	0	logfile
✔	9BLU	44677	2025-05-10	2024-05-01	3.38	3.73	3.50	3.8	0.003	0.45	0.0	0.04	18.95	0.00	2.214	6.89	3.18	2.9	97.1	0.0	1.22	0.68	0.79	1.04	3.8	0.003	0.51	0.0	0.04	19.26	0.00	2.612	5.81	2.89	3.3	96.7	0.0	1.38	0.20	0.68	0.80	1.00	6377	831	3	0	0	0	0	logfile
✔	9BLU	44677	2025-04-27	2024-05-01	3.38	3.73	3.50	3.8	0.003	0.45	0.0	0.04	18.95	0.00	2.214	6.89	3.18	2.9	97.1	0.0	1.22	0.68	0.79	1.04	3.8	0.002	0.48	0.0	0.04	19.22	0.00	2.470	5.58	3.47	3.3	96.7	0.0	1.60	0.20	0.68	0.79	1.00	6377	831	3	0	0	0	0	logfile
✔	9BLU	44677	2025-03-11	2024-05-01	3.38	3.73	3.50	3.8	0.003	0.45	0.0	0.04	18.95	0.00	2.214	6.89	3.18	2.9	97.1	0.0	1.22	0.68	0.79	1.04	3.8	0.002	0.48	0.0	0.04	19.22	0.00	2.470	5.58	3.47	3.3	96.7	0.0	1.60	0.20	0.68	0.79	1.00	6377	831	3	0	0	0	0	logfile
✔	9BLU	44677	2025-02-11	2024-05-01	3.38	3.73	3.50	3.8	0.003	0.45	0.0	0.04	18.95	0.00	2.214	6.89	3.18	2.9	97.1	0.0	1.22	0.68	0.79	1.04	3.8	0.003	0.51	0.0	0.04	19.26	0.00	2.612	5.81	2.89	3.3	96.7	0.0	1.38	0.20	0.68	0.80	1.00	6377	831	3	0	0	0	0	logfile
✔	9BLT	44676	2025-04-28	2024-05-01	3.38	3.70	3.50	3.8	0.003	0.51	0.0	0.04	18.59	0.00	2.218	8.29	2.72	4.8	95.2	0.0	0.49	0.71	0.79	1.81	3.8	0.003	0.53	0.0	0.04	18.66	0.00	2.458	7.31	3.50	4.3	95.7	0.0	0.74	0.81	0.70	0.79	1.70	7098	921	4	0	0	0	0	logfile
✔	9BLT	44676	2025-05-11	2024-05-01	3.38	3.70	3.50	3.8	0.003	0.51	0.0	0.04	18.59	0.00	2.218	8.29	2.72	4.8	95.2	0.0	0.49	0.71	0.79	1.81	3.8	0.003	0.53	0.0	0.04	18.64	0.00	2.464	7.17	2.98	3.8	96.2	0.0	0.80	0.81	0.70	0.79	1.67	7098	921	4	0	0	0	0	logfile
✔	9BLT	44676	2025-02-12	2024-05-01	3.38	3.70	3.50	3.8	0.003	0.51	0.0	0.04	18.59	0.00	2.218	8.29	2.72	4.8	95.2	0.0	0.49	0.71	0.79	1.81	3.8	0.003	0.53	0.0	0.04	18.64	0.00	2.464	7.17	2.98	3.8	96.2	0.0	0.80	0.81	0.70	0.79	1.67	7098	921	4	0	0	0	0	logfile

• ← previous
• Page 181 of 5030
• next →