Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	9BKJ	44642	2025-05-10	2024-04-29	2.59	2.90	2.70	2.9	0.005	0.76	0.0	0.05	12.93	0.00	2.260	9.17	0.71	2.0	97.8	0.2	1.02	0.61	0.68	3.31	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6795	891	6	0	1	0	0	logfile
✔	9BKV	44646	2025-01-18	2024-04-29	3.43	4.33	3.47	3.7	0.006	0.84	0.0	0.05	16.68	0.01	2.064	17.52	0.44	6.1	93.7	0.1	-0.45	0.88	0.76	1.03	3.7	0.003	0.76	0.0	0.04	16.95	0.00	1.497	12.41	2.87	5.4	94.4	0.1	0.41	0.79	0.91	0.82	0.54	12562	1571	4	0	2	0	0	logfile
✔	9BKV	44646	2025-05-15	2024-04-29	3.43	4.33	3.47	3.7	0.006	0.84	0.0	0.05	16.68	0.01	2.064	17.52	0.44	6.1	93.7	0.1	-0.45	0.88	0.76	1.03	3.8	0.003	0.77	0.0	0.04	16.93	0.00	1.493	12.21	3.01	4.9	95.0	0.1	0.36	0.79	0.91	0.82	0.59	12562	1571	4	0	2	0	0	logfile
✔	9BKV	44646	2024-12-30	2024-04-29	3.43	4.33	3.47	3.7	0.006	0.84	0.0	0.05	16.68	0.01	2.064	17.52	0.44	6.1	93.7	0.1	-0.45	0.88	0.76	1.03	3.7	0.003	0.79	0.0	0.04	16.86	0.00	1.471	12.49	2.72	5.6	94.3	0.1	0.35	0.79	0.91	0.82	0.54	12562	1571	4	0	2	0	0	logfile
✔	8ZCF	39928	2025-05-11	2024-04-29	2.9	2.22	2.94	1.6	0.004	0.64	0.0	0.04	16.40	0.00	2.194	14.31	0.71	5.5	94.5	0.0	-0.08	0.76	0.75	2.11	1.5	0.004	0.66	0.0	0.05	17.02	0.00	2.546	10.76	4.02	4.0	96.0	0.0	-0.08	2.11	0.77	0.76	1.97	8053	1038	5	0	0	0	0	logfile
✔	8ZCF	39928	2025-04-29	2024-04-29	2.9	2.22	2.94	1.6	0.004	0.64	0.0	0.04	16.40	0.00	2.194	14.31	0.71	5.5	94.5	0.0	-0.08	0.76	0.75	2.11	2.1	0.004	0.68	0.0	0.05	16.94	0.00	2.545	10.76	3.79	4.6	95.4	0.0	-0.20	2.11	0.77	0.76	1.92	8053	1038	5	0	0	0	0	logfile
✔	8ZCJ	39931	2024-10-10	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.69	0.0	0.04	16.47	0.00	2.245	9.43	3.67	4.7	95.3	0.0	-1.15	1.14	0.63	0.70	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2024-12-28	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.69	0.0	0.04	16.47	0.00	2.245	9.43	3.67	4.7	95.3	0.0	-1.15	1.14	0.63	0.70	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2025-01-15	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.004	0.71	0.0	0.04	16.54	0.00	2.231	9.57	4.41	5.9	94.1	0.0	-1.21	0.39	0.63	0.71	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2025-02-12	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.004	0.71	0.0	0.04	16.54	0.00	2.231	9.57	4.41	5.9	94.1	0.0	-1.21	0.39	0.63	0.71	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2025-03-12	2024-04-29	3.09	3.33	3.12	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.67	0.0	0.04	16.39	0.00	2.281	8.61	4.85	4.4	95.6	0.0	-1.12	1.14	0.63	0.71	1.90	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2025-04-28	2024-04-29	3.09	3.33	3.12	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.004	0.70	0.0	0.04	16.40	0.00	2.261	9.16	5.58	5.1	94.9	0.0	-1.14	0.40	0.63	0.71	1.72	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2025-05-11	2024-04-29	3.09	3.33	3.12	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.69	0.0	0.04	16.51	0.00	2.261	8.07	3.67	4.7	95.3	0.0	-1.17	1.14	0.62	0.70	2.04	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2024-08-03	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.69	0.0	0.04	16.47	0.00	2.245	9.43	3.67	4.7	95.3	0.0	-1.15	1.14	0.63	0.70	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2024-09-24	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.69	0.0	0.04	16.47	0.00	2.245	9.43	3.67	4.7	95.3	0.0	-1.15	1.14	0.63	0.70	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCJ	39931	2024-11-14	2024-04-29	3.09	3.33	3.11	3.4	0.007	0.93	1.0	0.05	16.04	0.01	2.258	9.36	0.44	5.3	94.6	0.1	-1.54	0.62	0.69	1.51	3.3	0.003	0.69	0.0	0.04	16.47	0.00	2.245	9.43	3.67	4.7	95.3	0.0	-1.15	1.14	0.63	0.70	1.96	7808	1126	7	0	1	0	0	logfile
✔	8ZCE	39927	2025-04-28	2024-04-29	3.1	2.23	3.12	2.0	0.004	0.66	0.0	0.04	15.44	0.01	2.122	14.60	0.36	4.6	95.4	0.0	-0.37	0.73	0.71	1.54	2.0	0.003	0.57	0.0	0.04	16.30	0.00	2.542	9.65	3.41	3.3	96.7	0.0	0.19	0.38	0.74	0.71	1.37	7963	1039	5	0	0	0	0	logfile
✔	8ZCE	39927	2025-05-11	2024-04-29	3.1	2.23	3.12	2.0	0.004	0.66	0.0	0.04	15.44	0.01	2.122	14.60	0.36	4.6	95.4	0.0	-0.37	0.73	0.71	1.54	2.0	0.003	0.58	0.0	0.04	16.27	0.00	2.548	10.10	3.53	3.4	96.6	0.0	0.13	0.37	0.74	0.71	1.27	7963	1039	5	0	0	0	0	logfile
✔	9BKK	44643	2025-04-28	2024-04-29	2.51	2.85	2.68	2.9	0.012	1.75	2.0	0.10	12.29	0.01	2.388	6.33	2.54	4.5	94.6	0.9	-1.67	0.46	0.61	2.41	2.9	0.003	0.64	0.0	0.04	15.92	0.00	2.379	6.03	1.27	2.4	97.6	0.0	1.48	1.15	0.56	0.73	2.16	6809	890	6	0	1	0	0	logfile
✔	9BKK	44643	2025-05-10	2024-04-29	2.51	2.85	2.68	2.9	0.012	1.75	2.0	0.10	12.29	0.01	2.388	6.33	2.54	4.5	94.6	0.9	-1.67	0.46	0.61	2.41	2.9	0.003	0.64	0.0	0.04	15.72	0.00	2.409	6.25	0.85	2.2	97.8	0.0	1.52	1.15	0.56	0.73	2.22	6809	890	6	0	1	0	0	logfile

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