Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9B39	44132	2024-07-25	2024-03-18	3.84	4.26	4.00	4.0	0.009	1.54	0.0	0.07	17.94	0.01	2.184	7.62	0.44	15.3	83.2	1.5	-5.60	0.71	0.80	1.55	4.0	0.003	0.92	0.0	0.05	14.48	0.00	2.094	15.75	1.53	13.2	86.3	0.5	-2.21	1.57	0.72	0.80	1.19	27522	3372	22	0	58	0	0	logfile
✔	9B39	44132	2024-08-09	2024-03-18	3.84	4.26	4.00	4.0	0.009	1.54	0.0	0.07	17.94	0.01	2.184	7.62	0.44	15.3	83.2	1.5	-5.60	0.71	0.80	1.55	4.0	0.004	0.93	0.0	0.05	14.51	0.00	2.382	13.44	1.94	13.7	86.0	0.4	-2.15	1.57	0.71	0.80	1.10	27522	3372	22	0	58	0	0	logfile
✔	9B34	44125	2024-08-02	2024-03-18	3.58	3.87	3.58	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.006	1.49	1.0	0.06	16.83	0.01	2.041	20.49	6.17	23.0	76.0	1.1	-4.29	2.01	0.72	0.73	0.92	3619	474	4	0	4	0	0	logfile
✘	9B34	44125	2024-07-18	2024-03-18	3.58	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	3619	474	4	0	4	0	0	logfile
✔	9B34	44125	2025-04-26	2024-03-18	3.58	3.87	3.56	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.004	1.01	0.0	0.05	16.39	0.01	2.023	16.56	2.47	22.6	76.6	0.9	-4.32	2.02	0.71	0.73	1.13	3619	474	4	0	4	0	0	logfile
✔	9B34	44125	2025-03-05	2024-03-18	3.58	3.87	3.56	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.005	1.04	0.0	0.05	16.41	0.01	1.991	18.52	3.70	23.2	75.7	1.1	-4.33	2.01	0.72	0.74	0.86	3619	474	4	0	4	0	0	logfile
✔	9B34	44125	2024-10-09	2024-03-18	3.58	3.87	3.58	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.006	1.49	1.0	0.06	16.83	0.01	2.041	20.49	6.17	23.0	76.0	1.1	-4.29	2.01	0.72	0.73	0.92	3619	474	4	0	4	0	0	logfile
✔	9B34	44125	2024-11-14	2024-03-18	3.58	3.87	3.58	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.006	1.49	1.0	0.06	16.83	0.01	2.041	20.49	6.17	23.0	76.0	1.1	-4.29	2.01	0.72	0.73	0.92	3619	474	4	0	4	0	0	logfile
✔	9B34	44125	2024-12-27	2024-03-18	3.58	3.87	3.58	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.006	1.49	1.0	0.06	16.83	0.01	2.041	20.49	6.17	23.0	76.0	1.1	-4.29	2.01	0.72	0.73	0.92	3619	474	4	0	4	0	0	logfile
✔	9B34	44125	2024-09-23	2024-03-18	3.58	3.87	3.58	3.9	0.007	1.47	0.0	0.08	12.86	0.01	2.121	8.00	0.49	23.6	74.5	1.9	-5.95	0.68	0.68	1.73	3.8	0.006	1.49	1.0	0.06	16.83	0.01	2.041	20.49	6.17	23.0	76.0	1.1	-4.29	2.01	0.72	0.73	0.92	3619	474	4	0	4	0	0	logfile
✔	8YPT	39493	2025-01-25	2024-03-18	3.05	3.26	3.06	3.3	0.003	0.59	0.0	0.05	15.68	0.00	2.167	7.27	0.80	1.9	98.1	0.0	0.24	0.68	0.84	3.33	3.3	0.003	0.52	0.0	0.04	16.21	0.00	2.536	4.47	3.23	2.4	97.6	0.0	0.32	1.21	0.72	0.87	3.52	23068	2894	5	0	0	0	0	logfile
✔	9B3A	44133	2025-04-26	2024-03-18	3.2	2.71	2.66	3.2	0.008	0.43	0.0	0.06	9.13	0.00	2.430	2.97	0.00	0.0	100.0	0.0	-1.00	0.51	0.80	5.51	3.2	0.038	0.49	0.0	0.06	14.72	0.00	2.456	5.05	4.00	0.6	99.4	0.0	-1.03	1.03	0.48	0.81	4.02	3345	420	45	0	45	0	0	logfile
✔	9B3C	44134	2025-04-26	2024-03-18	2.95	2.83	2.73	3.1	0.008	0.64	0.0	0.07	10.58	0.01	2.367	3.22	0.00	0.0	100.0	0.0	0.24	0.49	0.84	5.25	3.0	0.024	0.55	0.0	0.07	16.35	0.00	2.386	6.29	1.94	0.0	100.0	0.0	0.13	1.07	0.48	0.86	4.88	3270	420	45	0	45	0	0	logfile
✘	9B36	44129	2024-07-27	2024-03-18	4.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	36342	4320	44	0	136	0	0	logfile
✔	9B2Z	44118	2025-03-06	2024-03-18	2.83	3.06	2.86	3.0	0.007	0.82	0.0	0.05	15.83	0.01	2.200	8.50	0.18	3.4	96.6	0.0	-0.65	0.64	0.77	2.74	3.0	0.003	0.61	0.0	0.04	16.35	0.00	1.995	6.28	1.59	3.5	96.5	0.0	0.58	0.34	0.65	0.79	1.82	5506	711	4	0	4	0	0	logfile
✔	9B2Z	44118	2025-02-11	2024-03-18	2.83	3.06	2.86	3.1	0.007	0.82	0.0	0.05	15.83	0.01	2.200	8.50	0.18	3.4	96.6	0.0	-0.65	0.64	0.77	2.74	3.0	0.003	0.58	0.0	0.04	16.57	0.00	1.990	6.83	0.88	3.3	96.7	0.0	0.79	0.34	0.64	0.78	1.79	5506	711	4	0	4	0	0	logfile
✔	8YPU	39494	2025-01-24	2024-03-18	2.97	3.16	2.96	3.1	0.006	0.68	3.0	0.05	16.03	0.01	2.065	9.57	0.25	2.7	97.3	0.0	-0.23	0.77	0.86	3.78	3.1	0.004	0.71	1.0	0.04	16.54	0.00	2.532	5.69	2.87	3.1	96.9	0.0	0.12	0.22	0.75	0.88	3.54	22476	2820	4	0	0	0	0	logfile
✔	9B2Z	44118	2025-04-27	2024-03-18	2.83	3.06	2.86	3.0	0.007	0.82	0.0	0.05	15.83	0.01	2.200	8.50	0.18	3.4	96.6	0.0	-0.65	0.64	0.77	2.74	3.0	0.004	0.61	0.0	0.04	16.35	0.00	1.995	6.28	1.59	3.5	96.5	0.0	0.58	0.34	0.65	0.79	1.82	5506	711	4	0	4	0	0	logfile
✔	9B35	44128	2024-12-30	2024-03-18	3.4	3.76	3.53	3.7	0.008	1.24	0.0	0.06	10.75	0.01	2.030	5.09	0.65	11.7	87.4	0.9	-5.51	0.68	0.81	3.08	3.7	0.003	0.75	0.0	0.04	14.52	0.00	2.455	9.58	1.74	10.8	89.1	0.1	-0.74	1.59	0.67	0.81	1.89	14132	1780	8	0	0	0	0	logfile
✔	9B35	44128	2024-10-13	2024-03-18	3.4	3.76	3.53	3.7	0.008	1.24	0.0	0.06	10.75	0.01	2.030	5.09	0.65	11.7	87.4	0.9	-5.51	0.68	0.81	3.08	3.7	0.003	0.75	0.0	0.04	14.52	0.00	2.455	9.58	1.74	10.8	89.1	0.1	-0.74	1.59	0.67	0.81	1.89	14132	1780	8	0	0	0	0	logfile

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