Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9C3C	45165	2025-05-20	2024-05-31	4.3	4.51	4.30	4.4	0.004	0.72	0.0	0.05	15.49	0.00	2.212	10.13	0.00	3.7	96.3	0.0	-0.49	0.71	0.67	—	4.4	0.004	0.71	0.0	0.05	13.18	0.00	2.459	13.49	0.00	5.3	94.7	0.0	-0.64	0.79	0.63	0.52	—	19475	2458	19	0	25	0	0	logfile
✔	9C3C	45165	2025-01-23	2024-05-31	4.3	4.51	4.30	4.4	0.004	0.71	0.0	0.05	15.49	0.00	2.212	10.13	0.00	3.7	96.3	0.0	-0.49	0.71	0.67	—	4.4	0.003	0.67	0.0	0.04	13.12	0.00	2.466	12.10	0.00	4.8	95.2	0.0	-0.52	0.78	0.63	0.52	—	19475	2458	19	0	25	0	0	logfile
✔	9FJo	50507	2025-01-17	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.002	0.59	0.0	0.04	16.62	0.00	2.443	5.58	2.37	2.7	97.3	0.0	0.71	0.29	0.68	0.84	2.30	11466	1452	8	0	8	0	0	logfile
✔	9FJo	50507	2025-05-14	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.002	0.59	0.0	0.04	16.62	0.00	2.443	5.58	2.37	2.7	97.3	0.0	0.71	0.29	0.68	0.84	2.30	11466	1452	8	0	8	0	0	logfile
✔	9FJo	50507	2025-06-10	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.003	0.58	0.0	0.04	16.45	0.00	2.450	5.49	1.71	2.8	97.2	0.0	0.91	0.29	0.67	0.83	2.41	11466	1452	8	0	8	0	0	logfile
✔	9FJo	50507	2024-09-25	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.003	0.59	0.0	0.04	16.66	0.00	2.444	5.62	2.37	2.9	97.1	0.0	0.50	0.29	0.68	0.84	2.35	11466	1452	8	0	8	0	0	logfile
✔	9FJo	50507	2024-10-12	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.003	0.59	0.0	0.04	16.66	0.00	2.444	5.62	2.37	2.9	97.1	0.0	0.50	0.29	0.68	0.84	2.35	11466	1452	8	0	8	0	0	logfile
✔	9FJo	50507	2024-11-16	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.003	0.59	0.0	0.04	16.66	0.00	2.444	5.62	2.37	2.9	97.1	0.0	0.50	0.29	0.68	0.84	2.35	11466	1452	8	0	8	0	0	logfile
✔	9C3B	45164	2025-02-11	2024-05-31	3.4	3.72	3.46	3.6	0.007	0.88	0.0	0.05	16.52	0.02	2.213	9.76	3.24	8.2	90.2	1.5	-0.94	0.32	0.77	0.80	3.6	0.004	0.66	0.0	0.04	16.65	0.01	2.498	6.35	4.63	5.7	93.7	0.7	-0.56	1.00	0.33	0.89	3.06	4329	588	2	0	0	0	0	logfile
✔	9C3B	45164	2025-03-06	2024-05-31	3.4	3.72	3.45	3.6	0.007	0.88	0.0	0.05	16.52	0.02	2.213	9.76	3.24	8.2	90.2	1.5	-0.94	0.32	0.77	0.80	3.6	0.003	0.64	0.0	0.04	16.35	0.01	2.500	6.94	2.55	5.8	93.5	0.7	-0.52	1.00	0.33	0.90	3.19	4329	588	2	0	0	0	0	logfile
✔	9C3E	45166	2025-01-17	2024-05-31	3.5	4.21	3.49	3.9	0.005	0.89	0.0	0.05	15.76	0.01	2.140	16.01	1.92	4.2	95.7	0.2	-0.18	0.74	0.79	2.36	3.9	0.003	0.71	0.0	0.05	16.01	0.00	2.484	9.89	5.12	4.3	95.6	0.1	0.44	0.53	0.74	0.80	2.10	10619	1356	15	0	13	0	0	logfile
✔	9C3E	45166	2025-02-14	2024-05-31	3.5	4.21	3.49	3.9	0.005	0.89	0.0	0.05	15.76	0.01	2.140	16.01	1.92	4.2	95.7	0.2	-0.18	0.74	0.79	2.36	3.9	0.003	0.71	0.0	0.05	16.01	0.00	2.484	9.89	5.12	4.3	95.6	0.1	0.44	0.53	0.74	0.80	2.10	10619	1356	15	0	13	0	0	logfile
✔	9FJo	50507	2024-12-29	2024-05-31	3.05	3.39	3.10	3.4	0.002	0.52	0.0	0.04	15.85	0.00	2.165	5.36	0.24	2.1	97.9	0.0	-0.37	0.68	0.84	2.73	3.4	0.003	0.59	0.0	0.04	16.66	0.00	2.444	5.62	2.37	2.9	97.1	0.0	0.50	0.29	0.68	0.84	2.35	11466	1452	8	0	8	0	0	logfile
✔	9C3E	45166	2025-05-13	2024-05-31	3.5	4.21	3.49	3.9	0.005	0.96	0.0	0.05	15.76	0.01	2.140	16.01	1.92	4.2	95.7	0.2	-0.18	0.74	0.79	2.36	3.9	0.005	0.75	0.0	0.05	16.02	0.00	2.463	11.38	4.48	5.0	94.9	0.1	0.27	0.54	0.74	0.81	2.03	10619	1356	15	0	13	0	0	logfile
✔	9C3E	45166	2025-06-09	2024-05-31	3.5	4.21	3.49	3.9	0.005	0.96	0.0	0.05	15.76	0.01	2.140	16.01	1.92	4.2	95.7	0.2	-0.18	0.74	0.79	2.36	3.9	0.004	0.73	0.0	0.05	16.03	0.00	2.448	10.51	4.20	4.8	95.1	0.1	0.37	0.54	0.74	0.80	2.07	10619	1356	15	0	13	0	0	logfile
✔	9C3E	45166	2024-10-11	2024-05-31	3.5	4.21	3.49	3.9	0.005	0.89	0.0	0.05	15.76	0.01	2.140	16.01	1.92	4.2	95.7	0.2	-0.18	0.74	0.79	2.36	3.9	0.006	0.78	0.0	0.05	16.18	0.00	2.461	12.01	5.12	5.2	94.8	0.1	0.13	0.55	0.75	0.81	2.11	10619	1356	15	0	13	0	0	logfile
✔	9C3B	45164	2025-04-27	2024-05-31	3.4	3.72	3.45	3.6	0.007	0.88	0.0	0.05	16.52	0.02	2.213	9.76	3.24	8.2	90.2	1.5	-0.94	0.32	0.77	0.80	3.6	0.003	0.64	0.0	0.04	16.35	0.01	2.500	6.94	2.55	5.8	93.5	0.7	-0.52	1.00	0.33	0.90	3.19	4329	588	2	0	0	0	0	logfile
✔	9C3B	45164	2025-05-10	2024-05-31	3.4	3.72	3.45	3.6	0.007	0.88	0.0	0.05	16.52	0.02	2.213	9.76	3.24	8.2	90.2	1.5	-0.94	0.32	0.77	0.80	3.6	0.004	0.66	0.0	0.04	16.65	0.01	2.498	6.35	4.63	5.7	93.7	0.7	-0.56	1.00	0.33	0.89	3.06	4329	588	2	0	0	0	0	logfile
✔	9C3B	45164	2025-06-04	2024-05-31	3.4	3.72	3.45	3.6	0.007	0.88	0.0	0.05	16.52	0.02	2.213	9.76	3.24	8.2	90.2	1.5	-0.94	0.32	0.77	0.80	3.6	0.003	0.64	0.0	0.04	16.35	0.01	2.500	6.94	2.55	5.8	93.5	0.7	-0.52	1.00	0.33	0.90	3.19	4329	588	2	0	0	0	0	logfile
✔	9C3E	45166	2024-11-16	2024-05-31	3.5	4.21	3.49	3.9	0.005	0.89	0.0	0.05	15.76	0.01	2.140	16.01	1.92	4.2	95.7	0.2	-0.18	0.74	0.79	2.36	3.9	0.006	0.78	0.0	0.05	16.18	0.00	2.461	12.01	5.12	5.2	94.8	0.1	0.13	0.55	0.75	0.81	2.11	10619	1356	15	0	13	0	0	logfile

• ← previous
• Page 191 of 5208
• next →