Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	9JE0	61403	2024-11-14	2024-09-01	3.23	3.76	3.35	3.9	0.003	0.58	0.0	0.04	14.22	0.00	2.281	4.93	2.61	2.1	97.9	0.0	-0.32	0.44	0.66	1.06	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	3321	435	2	0	1	1	0	logfile
✔	9DER	46794	2024-11-17	2024-08-29	3.9	5.17	4.02	4.0	0.003	0.56	0.0	0.05	15.30	0.00	2.080	5.89	0.90	3.7	96.3	0.0	-0.23	0.86	0.71	0.15	4.1	0.005	0.68	0.0	0.04	11.76	0.00	1.848	13.31	0.77	7.5	92.5	0.0	-0.96	1.80	0.89	0.76	0.30	14207	925	9	0	24	2	6843	logfile
✔	9JA0	61286	2024-11-19	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.53	0.0	0.04	14.29	0.00	2.643	4.79	1.10	4.6	95.4	0.0	0.91	0.94	0.72	0.85	2.72	19716	2628	12	0	0	0	0	logfile
✔	9GK2	51414	2024-10-12	2024-08-23	2.5	3.25	2.53	2.9	0.004	0.74	8.0	0.04	19.42	0.01	2.075	9.60	4.15	4.1	95.6	0.3	1.13	0.61	0.68	1.58	3.0	0.004	0.70	0.0	0.04	19.00	0.00	2.367	7.78	3.54	3.5	96.3	0.2	1.75	0.94	0.60	0.71	1.56	60516	7776	18	0	0	0	0	logfile
✔	9JA0	61286	2024-09-28	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.53	0.0	0.04	14.29	0.00	2.643	4.79	1.10	4.6	95.4	0.0	0.91	0.94	0.72	0.85	2.72	19716	2628	12	0	0	0	0	logfile
✘	9JA0	61286	2024-10-15	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19716	2628	12	0	0	0	0	logfile
✔	9D9L	46676	2024-10-10	2024-08-21	4.0	3.70	—	3.6	0.012	1.86	15.0	0.10	13.80	0.01	2.522	0.06	0.87	5.4	94.6	0.0	-1.53	0.50	0.65	—	3.6	0.003	0.58	1.0	0.04	15.37	0.00	2.211	3.74	2.12	4.1	95.9	0.0	-1.44	1.70	0.63	0.78	—	49929	3384	12	0	0	0	24441	logfile
✔	9D9L	46676	2024-11-18	2024-08-21	4.0	3.70	—	3.6	0.012	1.86	15.0	0.10	13.80	0.01	2.522	0.06	0.87	5.4	94.6	0.0	-1.53	0.50	0.65	—	3.6	0.003	0.58	1.0	0.04	15.37	0.00	2.211	3.74	2.12	4.1	95.9	0.0	-1.44	1.70	0.63	0.78	—	49929	3384	12	0	0	0	24441	logfile
✔	9D7K	46607	2024-11-14	2024-08-16	3.0	2.55	3.04	2.9	0.002	0.55	0.0	0.04	17.29	0.00	2.308	9.53	1.60	3.1	96.9	0.0	0.63	0.65	0.67	2.01	2.2	0.005	0.91	0.0	0.05	18.37	0.01	2.494	17.82	2.88	4.8	95.2	0.0	0.36	0.76	0.65	0.72	1.79	2843	359	1	0	0	0	0	logfile
✔	9GG6	51325	2024-10-09	2024-08-13	3.36	3.18	3.07	3.3	0.003	0.71	0.0	0.05	15.58	0.00	2.386	4.80	0.00	6.4	93.6	0.0	-3.00	0.38	0.87	3.89	3.3	0.007	0.72	0.0	0.05	17.52	0.00	2.556	4.34	6.02	9.2	90.8	0.0	-2.30	0.53	0.40	0.89	4.37	2142	288	3	0	0	0	0	logfile
✔	9GG6	51325	2024-09-23	2024-08-13	3.36	3.18	3.07	3.3	0.003	0.71	0.0	0.05	15.58	0.00	2.386	4.80	0.00	6.4	93.6	0.0	-3.00	0.38	0.87	3.89	3.3	0.007	0.72	0.0	0.05	17.52	0.00	2.556	4.34	6.02	9.2	90.8	0.0	-2.30	0.53	0.40	0.89	4.37	2142	288	3	0	0	0	0	logfile
✔	9GG6	51325	2024-11-13	2024-08-13	3.36	3.18	3.07	3.3	0.003	0.71	0.0	0.05	15.58	0.00	2.386	4.80	0.00	6.4	93.6	0.0	-3.00	0.38	0.87	3.89	3.3	0.007	0.72	0.0	0.05	17.52	0.00	2.556	4.34	6.02	9.2	90.8	0.0	-2.30	0.53	0.40	0.89	4.37	2142	288	3	0	0	0	0	logfile
✔	9GGQ	51339	2024-09-30	2024-08-13	2.6	3.32	2.71	3.0	0.003	0.50	0.0	0.04	14.80	0.00	1.848	3.87	0.37	3.4	96.6	0.0	0.28	0.80	0.87	3.45	3.1	0.003	0.58	0.0	0.04	16.42	0.00	1.922	3.62	1.03	3.6	96.4	0.0	0.86	0.99	0.80	0.89	2.82	24628	2905	16	84	6	8	0	logfile
✔	9GG1	51320	2024-11-14	2024-08-12	2.26	2.29	2.15	2.2	0.008	1.28	0.0	0.08	14.09	0.01	2.610	1.51	0.00	5.7	94.3	0.0	-2.57	0.45	0.92	7.85	2.2	0.004	0.69	0.0	0.05	15.90	0.00	2.495	3.02	0.81	3.6	95.5	1.0	-2.36	0.91	0.46	0.92	6.83	3232	428	4	0	0	0	0	logfile
✔	9GG1	51320	2024-09-23	2024-08-12	2.26	2.29	2.15	2.2	0.008	1.28	0.0	0.08	14.09	0.01	2.610	1.51	0.00	5.7	94.3	0.0	-2.57	0.45	0.92	7.85	2.2	0.004	0.69	0.0	0.05	15.90	0.00	2.495	3.02	0.81	3.6	95.5	1.0	-2.36	0.91	0.46	0.92	6.83	3232	428	4	0	0	0	0	logfile
✔	9GG0	51319	2024-10-09	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✔	9GG1	51320	2024-10-09	2024-08-12	2.26	2.29	2.15	2.2	0.008	1.28	0.0	0.08	14.09	0.01	2.610	1.51	0.00	5.7	94.3	0.0	-2.57	0.45	0.92	7.85	2.2	0.004	0.69	0.0	0.05	15.90	0.00	2.495	3.02	0.81	3.6	95.5	1.0	-2.36	0.91	0.46	0.92	6.83	3232	428	4	0	0	0	0	logfile
✔	9GG0	51319	2024-11-13	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2024-09-23	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✔	9J2N	61099	2024-10-09	2024-08-07	3.3	3.54	3.29	3.6	0.006	0.81	0.0	0.04	16.62	0.01	2.233	13.33	0.00	4.9	95.1	0.0	0.45	0.65	0.86	2.03	3.5	0.003	0.61	0.0	0.04	15.56	0.01	2.510	7.14	1.06	3.9	96.1	0.0	1.27	1.37	0.63	0.88	1.65	3584	468	2	0	1	0	0	logfile

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