Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9RP3	54139	2025-08-22	2025-06-23	2.1	3.06	2.15	2.7	0.003	0.66	0.0	0.04	15.01	0.01	2.465	8.45	0.72	1.3	98.7	0.0	1.56	0.79	0.82	4.11	2.7	0.004	0.58	0.0	0.04	15.72	0.00	2.543	9.16	1.16	1.5	98.5	0.0	1.49	3.27	0.78	0.81	3.69	6349	799	2	0	0	0	0	logfile
✔	9RP3	54139	2025-07-24	2025-06-23	2.1	3.06	2.15	2.7	0.003	0.66	0.0	0.04	15.01	0.01	2.465	8.52	0.72	1.3	98.7	0.0	1.56	0.79	0.82	4.11	2.7	0.003	0.57	0.0	0.04	15.68	0.00	2.552	8.29	0.72	1.6	98.4	0.0	1.57	3.27	0.78	0.81	3.30	6349	799	2	0	0	0	0	logfile
✔	9RP3	54139	2025-09-17	2025-06-23	2.1	3.06	2.15	2.7	0.003	0.66	0.0	0.04	15.01	0.01	2.465	8.45	0.72	1.3	98.7	0.0	1.56	0.79	0.82	4.11	2.7	0.004	0.58	0.0	0.04	15.72	0.00	2.543	9.16	1.16	1.5	98.5	0.0	1.49	3.27	0.78	0.81	3.69	6349	799	2	0	0	0	0	logfile
✔	9P6H	71309	2025-07-24	2025-06-19	2.75	3.35	2.79	3.2	0.007	1.01	0.0	0.06	23.35	0.02	2.215	11.68	0.32	4.6	95.3	0.1	-0.73	0.52	0.83	3.40	3.2	0.003	0.69	0.0	0.04	15.56	0.00	1.349	5.67	1.29	3.3	96.7	0.0	0.16	0.49	0.49	0.82	2.88	5963	701	7	0	21	0	0	logfile
✔	9P6H	71309	2025-09-17	2025-06-19	2.75	3.35	2.79	3.2	0.007	1.01	0.0	0.06	23.35	0.02	2.215	11.68	0.32	4.6	95.3	0.1	-0.73	0.52	0.83	3.40	3.2	0.004	0.72	0.0	0.05	15.77	0.01	2.288	5.84	1.61	2.9	97.0	0.1	0.09	0.49	0.49	0.82	2.76	5963	701	7	0	21	0	0	logfile
✔	9P6H	71309	2025-08-22	2025-06-19	2.75	3.35	2.79	3.2	0.007	1.01	0.0	0.06	23.35	0.02	2.215	11.68	0.32	4.6	95.3	0.1	-0.73	0.52	0.83	3.40	3.2	0.004	0.72	0.0	0.05	15.77	0.01	2.288	5.84	1.61	2.9	97.0	0.1	0.09	0.49	0.49	0.82	2.76	5963	701	7	0	21	0	0	logfile
✔	9ViC	65083	2025-09-17	2025-06-18	2.45	2.63	2.46	2.7	0.016	1.76	6.0	0.09	16.51	0.03	2.069	3.71	3.96	1.4	97.5	1.1	-2.50	0.60	0.78	3.63	2.7	0.003	0.63	0.0	0.04	17.37	0.01	2.594	4.83	2.86	0.7	98.9	0.4	3.84	1.12	0.70	0.83	2.89	4486	566	8	0	8	0	0	logfile
✔	9ViB	65082	2025-09-17	2025-06-18	2.26	2.38	2.26	2.4	0.015	1.80	2.0	0.09	17.07	0.03	2.360	3.14	5.29	1.8	97.8	0.4	-1.15	0.61	0.79	4.99	2.4	0.004	0.67	0.0	0.04	17.11	0.01	2.626	3.71	1.10	1.1	98.9	0.0	3.60	1.10	0.72	0.85	4.55	4486	566	8	0	8	0	0	logfile
✘	9P6B	71303	2025-09-19	2025-06-18	2.74	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22762	2568	12	0	42	92	0	logfile
✔	9ViC	65083	2025-08-22	2025-06-18	2.45	2.63	2.46	2.7	0.016	1.76	6.0	0.09	16.51	0.03	2.069	3.71	3.96	1.4	97.5	1.1	-2.50	0.60	0.78	3.63	2.7	0.003	0.63	0.0	0.04	17.37	0.01	2.594	4.83	2.86	0.7	98.9	0.4	3.84	1.12	0.70	0.83	2.89	4486	566	8	0	8	0	0	logfile
✔	9ViB	65082	2025-08-22	2025-06-18	2.26	2.38	2.26	2.4	0.015	1.80	2.0	0.09	17.07	0.03	2.360	3.14	5.29	1.8	97.8	0.4	-1.15	0.61	0.79	4.99	2.4	0.004	0.67	0.0	0.04	17.11	0.01	2.626	3.71	1.10	1.1	98.9	0.0	3.60	1.10	0.72	0.85	4.55	4486	566	8	0	8	0	0	logfile
✘	9P6B	71303	2025-08-24	2025-06-18	2.74	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22762	2568	12	0	42	92	0	logfile
✔	9ViE	65085	2025-08-22	2025-06-18	2.38	2.55	2.40	2.6	0.014	1.64	0.0	0.09	16.94	0.02	2.252	1.92	2.92	1.8	98.2	0.0	-1.60	0.59	0.77	4.92	2.6	0.004	0.59	0.0	0.04	18.22	0.00	2.628	4.59	1.67	0.4	99.6	0.0	3.27	0.45	0.65	0.79	3.60	4746	574	8	0	8	0	0	logfile
✔	9ViD	65084	2025-09-17	2025-06-18	2.22	2.36	2.21	2.4	0.013	1.54	2.0	0.10	16.08	0.02	2.386	1.71	0.00	1.8	98.2	0.0	-0.11	0.59	0.75	5.13	2.4	0.004	0.61	0.0	0.04	17.84	0.00	2.633	4.05	2.50	0.4	99.6	0.0	3.58	1.11	0.72	0.82	4.01	4746	574	8	0	8	0	0	logfile
✔	9ViD	65084	2025-08-22	2025-06-18	2.22	2.36	2.21	2.4	0.013	1.54	2.0	0.10	16.08	0.02	2.386	1.71	0.00	1.8	98.2	0.0	-0.11	0.59	0.75	5.13	2.4	0.004	0.61	0.0	0.04	17.84	0.00	2.633	4.05	2.50	0.4	99.6	0.0	3.58	1.11	0.72	0.82	4.01	4746	574	8	0	8	0	0	logfile
✔	9ViE	65085	2025-09-17	2025-06-18	2.38	2.55	2.40	2.6	0.014	1.64	0.0	0.09	16.94	0.02	2.252	1.92	2.92	1.8	98.2	0.0	-1.60	0.59	0.77	4.92	2.6	0.004	0.59	0.0	0.04	18.22	0.00	2.628	4.59	1.67	0.4	99.6	0.0	3.27	0.45	0.65	0.79	3.60	4746	574	8	0	8	0	0	logfile
✔	9P4Z	71290	2025-08-22	2025-06-17	2.83	2.98	2.83	3.0	0.004	0.62	0.0	0.05	16.92	0.00	2.034	4.27	0.00	1.7	98.3	0.0	1.11	0.48	0.83	2.09	3.0	0.004	0.59	0.0	0.04	15.74	0.00	2.165	9.45	3.81	1.7	98.3	0.0	1.91	0.94	0.48	0.84	1.66	3167	407	2	0	4	0	0	logfile
✔	9P4Z	71290	2025-09-17	2025-06-17	2.83	2.98	2.83	3.0	0.004	0.62	0.0	0.05	16.92	0.00	2.034	4.27	0.00	1.7	98.3	0.0	1.11	0.48	0.83	2.09	3.0	0.004	0.59	0.0	0.04	15.74	0.00	2.165	9.45	3.81	1.7	98.3	0.0	1.91	0.94	0.48	0.84	1.66	3167	407	2	0	4	0	0	logfile
✔	9P3Y	71259	2025-08-26	2025-06-14	3.3	3.27	—	1.8	0.003	0.64	0.0	0.05	11.50	0.00	2.286	3.48	0.10	3.1	96.9	0.0	-0.63	0.89	0.81	1.98	1.6	0.005	0.78	0.0	0.05	14.11	0.00	2.427	6.40	2.34	4.3	95.7	0.0	-0.33	1.08	0.93	0.91	3.11	34636	4464	28	0	32	0	0	logfile
✔	9P3i	71241	2025-08-26	2025-06-13	2.35	3.28	2.47	3.0	0.006	0.76	0.0	0.06	16.90	0.01	2.057	4.74	0.77	3.1	96.8	0.1	-0.28	0.77	0.90	3.95	3.0	0.003	0.57	0.0	0.04	14.70	0.00	2.484	3.23	1.81	2.5	97.5	0.0	0.44	0.28	0.77	0.90	3.65	31608	3964	32	0	60	452	0	logfile

• ← previous
• Page 2 of 5578
• next →