Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8ZMD	60243	2025-06-06	2024-05-23	3.25	2.40	3.25	2.2	0.007	0.82	0.0	0.05	12.14	0.01	2.181	5.96	0.14	4.4	95.6	0.0	0.04	0.74	0.75	2.61	2.3	0.005	0.64	0.0	0.04	14.70	0.00	2.529	4.73	2.62	4.8	95.2	0.0	0.76	0.36	0.76	0.77	1.53	7012	927	4	0	0	0	0	logfile
✔	8ZMP	60253	2025-06-22	2024-05-23	3.38	3.65	3.40	3.6	0.005	0.74	3.0	0.05	16.90	0.00	2.236	7.35	5.41	4.7	95.3	0.0	-1.31	0.79	0.86	2.22	3.6	0.003	0.65	0.0	0.05	15.19	0.00	2.471	4.50	4.37	3.3	96.7	0.0	-0.57	0.31	0.79	0.86	2.40	26175	3198	33	0	90	0	0	logfile
✘	9BY3	45019	2025-06-14	2024-05-23	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16036	1944	8	2	10	0	0	logfile
✘	9BY3	45019	2025-05-17	2024-05-23	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16036	1944	8	2	10	0	0	logfile
✔	9BYH	45031	2025-06-10	2024-05-23	2.53	2.70	2.54	2.7	0.002	0.50	0.0	0.04	18.81	0.00	2.047	9.86	0.89	1.9	98.1	0.0	0.89	0.72	0.84	4.29	2.7	0.003	0.55	0.0	0.04	18.91	0.00	2.059	8.72	2.03	1.7	98.3	0.0	0.84	0.22	0.69	0.83	4.29	11524	1394	6	2	6	0	0	logfile
✔	9BYH	45031	2025-05-14	2024-05-23	2.53	2.70	2.54	2.7	0.002	0.50	0.0	0.04	18.81	0.00	2.047	9.86	0.89	1.9	98.1	0.0	0.89	0.72	0.84	4.29	2.7	0.003	0.54	0.0	0.04	18.85	0.00	2.066	8.37	1.86	1.7	98.3	0.0	0.86	0.22	0.69	0.83	4.37	11524	1394	6	2	6	0	0	logfile
✘	9BY8	45021	2025-06-14	2024-05-23	3.88	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16036	1944	8	2	10	0	0	logfile
✔	9BY0	45016	2025-06-14	2024-05-23	4.19	4.15	3.60	3.9	0.008	0.84	4.0	0.06	17.53	0.00	1.912	10.11	1.40	2.1	97.9	0.0	0.56	0.67	0.62	—	3.9	0.006	0.80	0.0	0.05	14.73	0.00	1.750	19.65	0.00	3.2	96.8	0.0	0.45	2.54	0.71	0.76	—	16678	2026	9	2	10	0	0	logfile
✔	9BY0	45016	2025-05-18	2024-05-23	4.19	4.15	3.60	3.9	0.008	0.84	4.0	0.06	17.53	0.00	1.912	10.11	1.40	2.1	97.9	0.0	0.56	0.67	0.62	—	3.9	0.004	0.74	0.0	0.05	14.72	0.00	1.867	16.31	0.00	2.7	97.3	0.0	0.44	2.54	0.70	0.75	—	16678	2026	9	2	10	0	0	logfile
✔	8ZMJ	60249	2025-05-12	2024-05-23	3.73	5.72	3.90	3.9	0.004	0.68	0.0	0.05	21.61	0.00	2.205	17.11	0.49	2.7	97.3	0.0	0.66	0.87	0.65	1.14	4.0	0.003	0.68	0.0	0.03	21.90	0.00	2.045	15.55	1.79	2.6	97.4	0.0	0.87	1.93	0.92	0.83	0.60	9184	696	3	169	0	0	0	logfile
✔	8ZMJ	60249	2025-06-07	2024-05-23	3.73	5.72	3.90	3.9	0.004	0.68	0.0	0.05	21.61	0.00	2.205	17.11	0.49	2.7	97.3	0.0	0.66	0.87	0.65	1.14	4.0	0.003	0.68	0.0	0.03	22.01	0.00	2.025	18.79	2.27	2.3	97.7	0.0	0.92	1.93	0.92	0.84	0.66	9184	696	3	169	0	0	0	logfile
✔	8ZMJ	60249	2025-04-30	2024-05-23	3.73	5.72	3.90	3.9	0.004	0.68	0.0	0.05	21.61	0.00	2.205	17.11	0.49	2.7	97.3	0.0	0.66	0.87	0.65	1.14	4.0	0.003	0.68	0.0	0.03	22.01	0.00	2.025	18.79	2.27	2.3	97.7	0.0	0.92	1.93	0.92	0.84	0.66	9184	696	3	169	0	0	0	logfile
✘	9FFF	50355	2024-12-31	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15045	2069	4	65	0	0	0	logfile
✘	9FFF	50355	2024-11-18	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15045	2069	4	65	0	0	0	logfile
✘	9FFF	50355	2024-10-13	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15045	2069	4	65	0	0	0	logfile
✘	9FFF	50355	2024-09-27	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15045	2069	4	65	0	0	0	logfile
✔	9FFF	50355	2025-06-13	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	2.8	0.003	0.68	0.0	0.04	20.91	0.00	2.027	11.33	4.46	4.9	95.0	0.0	1.09	1.24	0.83	0.73	0.36	15045	2069	4	65	0	0	0	logfile
✔	9FFF	50355	2025-05-17	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	2.8	0.003	0.66	0.0	0.04	20.82	0.00	2.060	10.54	3.36	3.9	96.0	0.0	1.26	1.24	0.83	0.72	0.15	15045	2069	4	65	0	0	0	logfile
✔	9FFF	50355	2025-01-20	2024-05-23	3.68	4.27	3.58	2.7	0.003	0.65	0.0	0.04	20.68	0.00	2.128	11.90	0.67	4.4	95.5	0.1	0.95	0.83	0.72	0.32	2.8	0.003	0.66	0.0	0.04	20.82	0.00	2.060	10.54	3.36	3.9	96.0	0.0	1.26	1.24	0.83	0.72	0.15	15045	2069	4	65	0	0	0	logfile
✘	9BYG	45030	2025-06-14	2024-05-23	3.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16036	1944	8	2	10	0	0	logfile

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